data_3CRP # _model_server_result.job_id wGfTuvJtC7ugPLsvP-_H0g _model_server_result.datetime_utc '2024-12-23 10:48:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3crp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":35}' # _entry.id 3CRP # _exptl.entry_id 3CRP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CRP _cell.length_a 79.473 _cell.length_b 79.473 _cell.length_c 54.947 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CRP _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,F,G,H,I,J 1 1 E,K 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 79.473 79.473 0 3 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 79.473 79.473 0 4 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 19 B HIS 19 1_555 F NA NA . B NA 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc2 F NA NA . B NA 35 1_555 C NE2 HIS 19 C HIS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 F NA NA . B NA 35 1_555 I O HOH . C HOH 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CRP _atom_sites.fract_transf_matrix[1][1] 0.012583 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012583 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 NA B 1 35 1 NA NA . G 4 HOH A 1 35 1 HOH HOH . G 4 HOH A 2 36 4 HOH HOH . G 4 HOH A 3 37 5 HOH HOH . G 4 HOH A 4 38 6 HOH HOH . G 4 HOH A 5 39 8 HOH HOH . G 4 HOH A 6 40 13 HOH HOH . G 4 HOH A 7 41 15 HOH HOH . G 4 HOH A 8 42 19 HOH HOH . G 4 HOH A 9 43 20 HOH HOH . G 4 HOH A 10 44 24 HOH HOH . G 4 HOH A 11 45 26 HOH HOH . G 4 HOH A 12 46 34 HOH HOH . G 4 HOH A 13 47 39 HOH HOH . G 4 HOH A 14 48 40 HOH HOH . G 4 HOH A 15 49 42 HOH HOH . G 4 HOH A 16 50 48 HOH HOH . G 4 HOH A 17 51 49 HOH HOH . G 4 HOH A 18 52 50 HOH HOH . G 4 HOH A 19 53 51 HOH HOH . G 4 HOH A 20 54 53 HOH HOH . G 4 HOH A 21 55 54 HOH HOH . G 4 HOH A 22 56 72 HOH HOH . G 4 HOH A 23 57 77 HOH HOH . G 4 HOH A 24 58 82 HOH HOH . G 4 HOH A 25 59 84 HOH HOH . G 4 HOH A 26 60 87 HOH HOH . G 4 HOH A 27 61 99 HOH HOH . G 4 HOH A 28 62 103 HOH HOH . G 4 HOH A 29 63 104 HOH HOH . G 4 HOH A 30 64 109 HOH HOH . G 4 HOH A 31 65 113 HOH HOH . G 4 HOH A 32 66 120 HOH HOH . G 4 HOH A 33 67 123 HOH HOH . G 4 HOH A 34 68 129 HOH HOH . G 4 HOH A 35 69 58 HOH HOH . G 4 HOH A 36 70 45 HOH HOH . H 4 HOH B 1 36 9 HOH HOH . H 4 HOH B 2 37 12 HOH HOH . H 4 HOH B 3 38 30 HOH HOH . H 4 HOH B 4 39 31 HOH HOH . H 4 HOH B 5 40 32 HOH HOH . H 4 HOH B 6 41 33 HOH HOH . H 4 HOH B 7 42 35 HOH HOH . H 4 HOH B 8 43 43 HOH HOH . H 4 HOH B 9 44 47 HOH HOH . H 4 HOH B 10 45 52 HOH HOH . H 4 HOH B 11 46 62 HOH HOH . H 4 HOH B 12 47 70 HOH HOH . H 4 HOH B 13 48 75 HOH HOH . H 4 HOH B 14 49 76 HOH HOH . H 4 HOH B 15 50 80 HOH HOH . H 4 HOH B 16 51 85 HOH HOH . H 4 HOH B 17 52 89 HOH HOH . H 4 HOH B 18 53 92 HOH HOH . H 4 HOH B 19 54 96 HOH HOH . H 4 HOH B 20 55 97 HOH HOH . H 4 HOH B 21 56 100 HOH HOH . H 4 HOH B 22 57 105 HOH HOH . H 4 HOH B 23 58 106 HOH HOH . H 4 HOH B 24 59 107 HOH HOH . H 4 HOH B 25 60 117 HOH HOH . H 4 HOH B 26 61 119 HOH HOH . H 4 HOH B 27 62 125 HOH HOH . H 4 HOH B 28 63 57 HOH HOH . H 4 HOH B 29 64 63 HOH HOH . I 4 HOH C 1 35 7 HOH HOH . I 4 HOH C 2 36 14 HOH HOH . I 4 HOH C 3 37 16 HOH HOH . I 4 HOH C 4 38 21 HOH HOH . I 4 HOH C 5 39 27 HOH HOH . I 4 HOH C 6 40 37 HOH HOH . I 4 HOH C 7 41 38 HOH HOH . I 4 HOH C 8 42 41 HOH HOH . I 4 HOH C 9 43 44 HOH HOH . I 4 HOH C 10 44 46 HOH HOH . I 4 HOH C 11 45 55 HOH HOH . I 4 HOH C 12 47 61 HOH HOH . I 4 HOH C 13 49 64 HOH HOH . I 4 HOH C 14 50 78 HOH HOH . I 4 HOH C 15 51 79 HOH HOH . I 4 HOH C 16 52 90 HOH HOH . I 4 HOH C 17 53 94 HOH HOH . I 4 HOH C 18 54 95 HOH HOH . I 4 HOH C 19 55 101 HOH HOH . I 4 HOH C 20 56 102 HOH HOH . I 4 HOH C 21 57 110 HOH HOH . I 4 HOH C 22 58 111 HOH HOH . I 4 HOH C 23 59 115 HOH HOH . I 4 HOH C 24 60 116 HOH HOH . I 4 HOH C 25 61 121 HOH HOH . I 4 HOH C 26 62 124 HOH HOH . I 4 HOH C 27 63 126 HOH HOH . J 4 HOH D 1 35 2 HOH HOH . J 4 HOH D 2 36 3 HOH HOH . J 4 HOH D 3 37 10 HOH HOH . J 4 HOH D 4 38 11 HOH HOH . J 4 HOH D 5 39 17 HOH HOH . J 4 HOH D 6 40 18 HOH HOH . J 4 HOH D 7 41 22 HOH HOH . J 4 HOH D 8 42 23 HOH HOH . J 4 HOH D 9 43 25 HOH HOH . J 4 HOH D 10 44 28 HOH HOH . J 4 HOH D 11 45 29 HOH HOH . J 4 HOH D 12 46 36 HOH HOH . J 4 HOH D 13 48 56 HOH HOH . J 4 HOH D 14 49 59 HOH HOH . J 4 HOH D 15 50 60 HOH HOH . J 4 HOH D 16 51 65 HOH HOH . J 4 HOH D 17 52 66 HOH HOH . J 4 HOH D 18 53 68 HOH HOH . J 4 HOH D 19 54 69 HOH HOH . J 4 HOH D 20 55 71 HOH HOH . J 4 HOH D 21 56 74 HOH HOH . J 4 HOH D 22 57 81 HOH HOH . J 4 HOH D 23 58 83 HOH HOH . J 4 HOH D 24 59 86 HOH HOH . J 4 HOH D 25 60 91 HOH HOH . J 4 HOH D 26 61 93 HOH HOH . J 4 HOH D 27 62 98 HOH HOH . J 4 HOH D 28 63 112 HOH HOH . J 4 HOH D 29 64 114 HOH HOH . J 4 HOH D 30 65 122 HOH HOH . J 4 HOH D 31 66 127 HOH HOH . J 4 HOH D 32 67 130 HOH HOH . J 4 HOH D 33 68 128 HOH HOH . K 4 HOH E 1 67 67 HOH HOH . K 4 HOH E 2 73 73 HOH HOH . K 4 HOH E 3 88 88 HOH HOH . K 4 HOH E 4 108 108 HOH HOH . K 4 HOH E 5 118 118 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 26.143 _atom_site.Cartn_y 29.402 _atom_site.Cartn_z 18.344 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 35 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #