data_3CRQ # _model_server_result.job_id GVQkbF5RtJIbOWLCUcJ9aw _model_server_result.datetime_utc '2025-02-27 05:58:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3crq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":325}' # _entry.id 3CRQ # _exptl.entry_id 3CRQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 173.943 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DIPHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CRQ _cell.length_a 76.312 _cell.length_b 76.312 _cell.length_c 57.532 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CRQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 19 A THR 19 1_555 B MG MG . A MG 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc2 B MG MG . A MG 324 1_555 C O7 DPO . A DPO 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc3 B MG MG . A MG 324 1_555 C O3 DPO . A DPO 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc4 B MG MG . A MG 324 1_555 D O HOH . A HOH 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc5 B MG MG . A MG 324 1_555 D O HOH . A HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? metalc ? metalc6 B MG MG . A MG 324 1_555 D O HOH . A HOH 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? # _chem_comp.formula 'O7 P2 -4' _chem_comp.formula_weight 173.943 _chem_comp.id DPO _chem_comp.mon_nstd_flag . _chem_comp.name DIPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P1 O1 DPO doub 83 n n P1 O2 DPO sing 84 n n P1 O3 DPO sing 85 n n P1 O4 DPO sing 86 n n O4 P2 DPO sing 87 n n P2 O5 DPO doub 88 n n P2 O6 DPO sing 89 n n P2 O7 DPO sing 90 n n # _atom_sites.entry_id 3CRQ _atom_sites.fract_transf_matrix[1][1] 0.013104 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013104 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 324 1 MG MG . C 3 DPO A 1 325 1 DPO DPO . D 4 HOH A 1 326 1 HOH WAT . D 4 HOH A 2 327 2 HOH WAT . D 4 HOH A 3 328 3 HOH WAT . D 4 HOH A 4 329 4 HOH WAT . D 4 HOH A 5 330 5 HOH WAT . D 4 HOH A 6 331 6 HOH WAT . D 4 HOH A 7 332 7 HOH WAT . D 4 HOH A 8 333 8 HOH WAT . D 4 HOH A 9 334 9 HOH WAT . D 4 HOH A 10 335 10 HOH WAT . D 4 HOH A 11 336 11 HOH WAT . D 4 HOH A 12 337 12 HOH WAT . D 4 HOH A 13 338 13 HOH WAT . D 4 HOH A 14 339 14 HOH WAT . D 4 HOH A 15 340 15 HOH WAT . D 4 HOH A 16 341 16 HOH WAT . D 4 HOH A 17 342 17 HOH WAT . D 4 HOH A 18 343 18 HOH WAT . D 4 HOH A 19 344 19 HOH WAT . D 4 HOH A 20 345 20 HOH WAT . D 4 HOH A 21 346 21 HOH WAT . D 4 HOH A 22 347 22 HOH WAT . D 4 HOH A 23 348 23 HOH WAT . D 4 HOH A 24 349 24 HOH WAT . D 4 HOH A 25 350 25 HOH WAT . D 4 HOH A 26 351 26 HOH WAT . D 4 HOH A 27 352 27 HOH WAT . D 4 HOH A 28 353 28 HOH WAT . D 4 HOH A 29 354 29 HOH WAT . D 4 HOH A 30 355 30 HOH WAT . D 4 HOH A 31 356 31 HOH WAT . D 4 HOH A 32 357 32 HOH WAT . D 4 HOH A 33 358 33 HOH WAT . D 4 HOH A 34 359 34 HOH WAT . D 4 HOH A 35 360 35 HOH WAT . D 4 HOH A 36 361 36 HOH WAT . D 4 HOH A 37 362 37 HOH WAT . D 4 HOH A 38 363 38 HOH WAT . D 4 HOH A 39 364 39 HOH WAT . D 4 HOH A 40 365 40 HOH WAT . D 4 HOH A 41 366 41 HOH WAT . D 4 HOH A 42 367 42 HOH WAT . D 4 HOH A 43 368 43 HOH WAT . D 4 HOH A 44 369 44 HOH WAT . D 4 HOH A 45 370 45 HOH WAT . D 4 HOH A 46 371 46 HOH WAT . D 4 HOH A 47 372 47 HOH WAT . D 4 HOH A 48 373 48 HOH WAT . D 4 HOH A 49 374 49 HOH WAT . D 4 HOH A 50 375 50 HOH WAT . D 4 HOH A 51 376 51 HOH WAT . D 4 HOH A 52 377 52 HOH WAT . D 4 HOH A 53 378 53 HOH WAT . D 4 HOH A 54 379 54 HOH WAT . D 4 HOH A 55 380 55 HOH WAT . D 4 HOH A 56 381 56 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P1 DPO . . . C 3 56.932 20.001 22.243 1 37.11 ? P1 DPO 325 A 1 HETATM 2 O O1 DPO . . . C 3 57.266 18.649 21.735 1 37.72 ? O1 DPO 325 A 1 HETATM 3 O O2 DPO . . . C 3 57.79 20.379 23.549 1 37.36 ? O2 DPO 325 A 1 HETATM 4 O O3 DPO . . . C 3 57.244 21.142 21.152 1 34.68 ? O3 DPO 325 A 1 HETATM 5 O O4 DPO . . . C 3 55.381 20.144 22.655 1 37.72 ? O4 DPO 325 A 1 HETATM 6 P P2 DPO . . . C 3 54.71 21.56 23.032 1 35.79 ? P2 DPO 325 A 1 HETATM 7 O O5 DPO . . . C 3 53.408 21.74 22.35 1 37.88 ? O5 DPO 325 A 1 HETATM 8 O O6 DPO . . . C 3 54.566 21.6 24.635 1 33.21 ? O6 DPO 325 A 1 HETATM 9 O O7 DPO . . . C 3 55.765 22.709 22.633 1 35.37 ? O7 DPO 325 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #