data_3CRV # _model_server_result.job_id kAkZzDR0qJ5k3L81UTMMWQ _model_server_result.datetime_utc '2024-11-28 22:06:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3crv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 3CRV # _exptl.entry_id 3CRV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.64 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IRON/SULFUR CLUSTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CRV _cell.length_a 53.542 _cell.length_b 70.222 _cell.length_c 144.293 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CRV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 88 A CYS 88 1_555 C FE3 SF4 . A SF4 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc2 A SG CYS 102 A CYS 102 1_555 C FE4 SF4 . A SF4 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc3 A SG CYS 105 A CYS 105 1_555 C FE2 SF4 . A SF4 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc4 A SG CYS 137 A CYS 137 1_555 C FE1 SF4 . A SF4 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? # _chem_comp.formula 'Fe4 S4' _chem_comp.formula_weight 351.64 _chem_comp.id SF4 _chem_comp.mon_nstd_flag . _chem_comp.name 'IRON/SULFUR CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S2 SF4 sing 331 n n FE1 S3 SF4 sing 332 n n FE1 S4 SF4 sing 333 n n FE2 S1 SF4 sing 334 n n FE2 S3 SF4 sing 335 n n FE2 S4 SF4 sing 336 n n FE3 S1 SF4 sing 337 n n FE3 S2 SF4 sing 338 n n FE3 S4 SF4 sing 339 n n FE4 S1 SF4 sing 340 n n FE4 S2 SF4 sing 341 n n FE4 S3 SF4 sing 342 n n # _atom_sites.entry_id 3CRV _atom_sites.fract_transf_matrix[1][1] 0.018677 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014241 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00693 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FLC A 1 1900 1900 FLC FLC . C 3 SF4 A 1 600 600 SF4 FS4 . D 4 IPA A 1 1804 1804 IPA IPA . E 4 IPA A 1 1806 1806 IPA IPA . F 4 IPA A 1 1807 1807 IPA IPA . G 4 IPA A 1 1808 1808 IPA IPA . H 4 IPA A 1 1810 1810 IPA IPA . I 4 IPA A 1 1811 1811 IPA IPA . J 4 IPA A 1 1812 1812 IPA IPA . K 5 GOL A 1 2000 2000 GOL GOL . L 6 HOH A 1 601 601 HOH HOH . L 6 HOH A 2 602 602 HOH HOH . L 6 HOH A 3 603 603 HOH HOH . L 6 HOH A 4 604 604 HOH HOH . L 6 HOH A 5 605 605 HOH HOH . L 6 HOH A 6 606 606 HOH HOH . L 6 HOH A 7 607 607 HOH HOH . L 6 HOH A 8 608 608 HOH HOH . L 6 HOH A 9 609 609 HOH HOH . L 6 HOH A 10 610 610 HOH HOH . L 6 HOH A 11 611 611 HOH HOH . L 6 HOH A 12 612 612 HOH HOH . L 6 HOH A 13 613 613 HOH HOH . L 6 HOH A 14 614 614 HOH HOH . L 6 HOH A 15 615 615 HOH HOH . L 6 HOH A 16 616 616 HOH HOH . L 6 HOH A 17 617 617 HOH HOH . L 6 HOH A 18 618 618 HOH HOH . L 6 HOH A 19 619 619 HOH HOH . L 6 HOH A 20 620 620 HOH HOH . L 6 HOH A 21 622 622 HOH HOH . L 6 HOH A 22 623 623 HOH HOH . L 6 HOH A 23 625 625 HOH HOH . L 6 HOH A 24 626 626 HOH HOH . L 6 HOH A 25 627 627 HOH HOH . L 6 HOH A 26 628 628 HOH HOH . L 6 HOH A 27 629 629 HOH HOH . L 6 HOH A 28 630 630 HOH HOH . L 6 HOH A 29 631 631 HOH HOH . L 6 HOH A 30 632 632 HOH HOH . L 6 HOH A 31 633 633 HOH HOH . L 6 HOH A 32 634 634 HOH HOH . L 6 HOH A 33 635 635 HOH HOH . L 6 HOH A 34 636 636 HOH HOH . L 6 HOH A 35 637 637 HOH HOH . L 6 HOH A 36 638 638 HOH HOH . L 6 HOH A 37 639 639 HOH HOH . L 6 HOH A 38 640 640 HOH HOH . L 6 HOH A 39 641 641 HOH HOH . L 6 HOH A 40 642 642 HOH HOH . L 6 HOH A 41 643 643 HOH HOH . L 6 HOH A 42 644 644 HOH HOH . L 6 HOH A 43 645 645 HOH HOH . L 6 HOH A 44 646 646 HOH HOH . L 6 HOH A 45 647 647 HOH HOH . L 6 HOH A 46 648 648 HOH HOH . L 6 HOH A 47 649 649 HOH HOH . L 6 HOH A 48 650 650 HOH HOH . L 6 HOH A 49 651 651 HOH HOH . L 6 HOH A 50 652 652 HOH HOH . L 6 HOH A 51 653 653 HOH HOH . L 6 HOH A 52 654 654 HOH HOH . L 6 HOH A 53 655 655 HOH HOH . L 6 HOH A 54 656 656 HOH HOH . L 6 HOH A 55 657 657 HOH HOH . L 6 HOH A 56 658 658 HOH HOH . L 6 HOH A 57 659 659 HOH HOH . L 6 HOH A 58 660 660 HOH HOH . L 6 HOH A 59 661 661 HOH HOH . L 6 HOH A 60 662 662 HOH HOH . L 6 HOH A 61 663 663 HOH HOH . L 6 HOH A 62 664 664 HOH HOH . L 6 HOH A 63 665 665 HOH HOH . L 6 HOH A 64 666 666 HOH HOH . L 6 HOH A 65 667 667 HOH HOH . L 6 HOH A 66 668 668 HOH HOH . L 6 HOH A 67 669 669 HOH HOH . L 6 HOH A 68 670 670 HOH HOH . L 6 HOH A 69 671 671 HOH HOH . L 6 HOH A 70 672 672 HOH HOH . L 6 HOH A 71 673 673 HOH HOH . L 6 HOH A 72 674 674 HOH HOH . L 6 HOH A 73 675 675 HOH HOH . L 6 HOH A 74 676 676 HOH HOH . L 6 HOH A 75 677 677 HOH HOH . L 6 HOH A 76 678 678 HOH HOH . L 6 HOH A 77 679 679 HOH HOH . L 6 HOH A 78 680 680 HOH HOH . L 6 HOH A 79 681 681 HOH HOH . L 6 HOH A 80 683 683 HOH HOH . L 6 HOH A 81 684 684 HOH HOH . L 6 HOH A 82 685 685 HOH HOH . L 6 HOH A 83 686 686 HOH HOH . L 6 HOH A 84 687 687 HOH HOH . L 6 HOH A 85 688 688 HOH HOH . L 6 HOH A 86 690 690 HOH HOH . L 6 HOH A 87 691 691 HOH HOH . L 6 HOH A 88 693 693 HOH HOH . L 6 HOH A 89 694 694 HOH HOH . L 6 HOH A 90 695 695 HOH HOH . L 6 HOH A 91 696 696 HOH HOH . L 6 HOH A 92 697 697 HOH HOH . L 6 HOH A 93 698 698 HOH HOH . L 6 HOH A 94 699 699 HOH HOH . L 6 HOH A 95 701 701 HOH HOH . L 6 HOH A 96 702 702 HOH HOH . L 6 HOH A 97 703 703 HOH HOH . L 6 HOH A 98 704 704 HOH HOH . L 6 HOH A 99 705 705 HOH HOH . L 6 HOH A 100 706 706 HOH HOH . L 6 HOH A 101 707 707 HOH HOH . L 6 HOH A 102 708 708 HOH HOH . L 6 HOH A 103 709 709 HOH HOH . L 6 HOH A 104 710 710 HOH HOH . L 6 HOH A 105 712 712 HOH HOH . L 6 HOH A 106 713 713 HOH HOH . L 6 HOH A 107 714 714 HOH HOH . L 6 HOH A 108 715 715 HOH HOH . L 6 HOH A 109 716 716 HOH HOH . L 6 HOH A 110 717 717 HOH HOH . L 6 HOH A 111 718 718 HOH HOH . L 6 HOH A 112 719 719 HOH HOH . L 6 HOH A 113 720 720 HOH HOH . L 6 HOH A 114 723 723 HOH HOH . L 6 HOH A 115 724 724 HOH HOH . L 6 HOH A 116 725 725 HOH HOH . L 6 HOH A 117 726 726 HOH HOH . L 6 HOH A 118 727 727 HOH HOH . L 6 HOH A 119 728 728 HOH HOH . L 6 HOH A 120 730 730 HOH HOH . L 6 HOH A 121 731 731 HOH HOH . L 6 HOH A 122 732 732 HOH HOH . L 6 HOH A 123 733 733 HOH HOH . L 6 HOH A 124 734 734 HOH HOH . L 6 HOH A 125 736 736 HOH HOH . L 6 HOH A 126 737 737 HOH HOH . L 6 HOH A 127 738 738 HOH HOH . L 6 HOH A 128 739 739 HOH HOH . L 6 HOH A 129 740 740 HOH HOH . L 6 HOH A 130 741 741 HOH HOH . L 6 HOH A 131 742 742 HOH HOH . L 6 HOH A 132 743 743 HOH HOH . L 6 HOH A 133 744 744 HOH HOH . L 6 HOH A 134 746 746 HOH HOH . L 6 HOH A 135 747 747 HOH HOH . L 6 HOH A 136 748 748 HOH HOH . L 6 HOH A 137 749 749 HOH HOH . L 6 HOH A 138 750 750 HOH HOH . L 6 HOH A 139 751 751 HOH HOH . L 6 HOH A 140 753 753 HOH HOH . L 6 HOH A 141 754 754 HOH HOH . L 6 HOH A 142 755 755 HOH HOH . L 6 HOH A 143 756 756 HOH HOH . L 6 HOH A 144 757 757 HOH HOH . L 6 HOH A 145 758 758 HOH HOH . L 6 HOH A 146 759 759 HOH HOH . L 6 HOH A 147 760 760 HOH HOH . L 6 HOH A 148 761 761 HOH HOH . L 6 HOH A 149 762 762 HOH HOH . L 6 HOH A 150 763 763 HOH HOH . L 6 HOH A 151 764 764 HOH HOH . L 6 HOH A 152 765 765 HOH HOH . L 6 HOH A 153 766 766 HOH HOH . L 6 HOH A 154 767 767 HOH HOH . L 6 HOH A 155 768 768 HOH HOH . L 6 HOH A 156 769 769 HOH HOH . L 6 HOH A 157 770 770 HOH HOH . L 6 HOH A 158 771 771 HOH HOH . L 6 HOH A 159 772 772 HOH HOH . L 6 HOH A 160 773 773 HOH HOH . L 6 HOH A 161 774 774 HOH HOH . L 6 HOH A 162 775 775 HOH HOH . L 6 HOH A 163 777 777 HOH HOH . L 6 HOH A 164 778 778 HOH HOH . L 6 HOH A 165 779 779 HOH HOH . L 6 HOH A 166 780 780 HOH HOH . L 6 HOH A 167 781 781 HOH HOH . L 6 HOH A 168 782 782 HOH HOH . L 6 HOH A 169 783 783 HOH HOH . L 6 HOH A 170 784 784 HOH HOH . L 6 HOH A 171 785 785 HOH HOH . L 6 HOH A 172 786 786 HOH HOH . L 6 HOH A 173 788 788 HOH HOH . L 6 HOH A 174 789 789 HOH HOH . L 6 HOH A 175 790 790 HOH HOH . L 6 HOH A 176 791 791 HOH HOH . L 6 HOH A 177 792 792 HOH HOH . L 6 HOH A 178 793 793 HOH HOH . L 6 HOH A 179 794 794 HOH HOH . L 6 HOH A 180 795 795 HOH HOH . L 6 HOH A 181 796 796 HOH HOH . L 6 HOH A 182 797 797 HOH HOH . L 6 HOH A 183 798 798 HOH HOH . L 6 HOH A 184 799 799 HOH HOH . L 6 HOH A 185 800 800 HOH HOH . L 6 HOH A 186 801 801 HOH HOH . L 6 HOH A 187 802 802 HOH HOH . L 6 HOH A 188 803 803 HOH HOH . L 6 HOH A 189 804 804 HOH HOH . L 6 HOH A 190 805 805 HOH HOH . L 6 HOH A 191 806 806 HOH HOH . L 6 HOH A 192 807 807 HOH HOH . L 6 HOH A 193 808 808 HOH HOH . L 6 HOH A 194 809 809 HOH HOH . L 6 HOH A 195 810 810 HOH HOH . L 6 HOH A 196 811 811 HOH HOH . L 6 HOH A 197 812 812 HOH HOH . L 6 HOH A 198 813 813 HOH HOH . L 6 HOH A 199 814 814 HOH HOH . L 6 HOH A 200 815 815 HOH HOH . L 6 HOH A 201 816 816 HOH HOH . L 6 HOH A 202 817 817 HOH HOH . L 6 HOH A 203 818 818 HOH HOH . L 6 HOH A 204 819 819 HOH HOH . L 6 HOH A 205 820 820 HOH HOH . L 6 HOH A 206 821 821 HOH HOH . L 6 HOH A 207 822 822 HOH HOH . L 6 HOH A 208 823 823 HOH HOH . L 6 HOH A 209 824 824 HOH HOH . L 6 HOH A 210 825 825 HOH HOH . L 6 HOH A 211 826 826 HOH HOH . L 6 HOH A 212 827 827 HOH HOH . L 6 HOH A 213 828 828 HOH HOH . L 6 HOH A 214 829 829 HOH HOH . L 6 HOH A 215 830 830 HOH HOH . L 6 HOH A 216 831 831 HOH HOH . L 6 HOH A 217 832 832 HOH HOH . L 6 HOH A 218 833 833 HOH HOH . L 6 HOH A 219 834 834 HOH HOH . L 6 HOH A 220 835 835 HOH HOH . L 6 HOH A 221 837 837 HOH HOH . L 6 HOH A 222 838 838 HOH HOH . L 6 HOH A 223 842 842 HOH HOH . L 6 HOH A 224 843 843 HOH HOH . L 6 HOH A 225 844 844 HOH HOH . L 6 HOH A 226 845 845 HOH HOH . L 6 HOH A 227 846 846 HOH HOH . L 6 HOH A 228 847 847 HOH HOH . L 6 HOH A 229 848 848 HOH HOH . L 6 HOH A 230 849 849 HOH HOH . L 6 HOH A 231 850 850 HOH HOH . L 6 HOH A 232 851 851 HOH HOH . L 6 HOH A 233 852 852 HOH HOH . L 6 HOH A 234 853 853 HOH HOH . L 6 HOH A 235 854 854 HOH HOH . L 6 HOH A 236 855 855 HOH HOH . L 6 HOH A 237 856 856 HOH HOH . L 6 HOH A 238 857 857 HOH HOH . L 6 HOH A 239 858 858 HOH HOH . L 6 HOH A 240 859 859 HOH HOH . L 6 HOH A 241 860 860 HOH HOH . L 6 HOH A 242 861 861 HOH HOH . L 6 HOH A 243 862 862 HOH HOH . L 6 HOH A 244 863 863 HOH HOH . L 6 HOH A 245 864 864 HOH HOH . L 6 HOH A 246 865 865 HOH HOH . L 6 HOH A 247 866 866 HOH HOH . L 6 HOH A 248 867 867 HOH HOH . L 6 HOH A 249 868 868 HOH HOH . L 6 HOH A 250 869 869 HOH HOH . L 6 HOH A 251 870 870 HOH HOH . L 6 HOH A 252 871 871 HOH HOH . L 6 HOH A 253 873 873 HOH HOH . L 6 HOH A 254 874 874 HOH HOH . L 6 HOH A 255 875 875 HOH HOH . L 6 HOH A 256 876 876 HOH HOH . L 6 HOH A 257 877 877 HOH HOH . L 6 HOH A 258 878 878 HOH HOH . L 6 HOH A 259 879 879 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 SF4 . . . C 3 15.636 39.388 78.943 1 38.27 ? FE1 SF4 600 A 1 HETATM 2 FE FE2 SF4 . . . C 3 16.139 41.759 80.069 1 38.85 ? FE2 SF4 600 A 1 HETATM 3 FE FE3 SF4 . . . C 3 14.086 41.595 78.277 1 36.96 ? FE3 SF4 600 A 1 HETATM 4 FE FE4 SF4 . . . C 3 16.606 41.286 77.441 1 39.47 ? FE4 SF4 600 A 1 HETATM 5 S S1 SF4 . . . C 3 15.705 43.143 78.35 1 39.53 ? S1 SF4 600 A 1 HETATM 6 S S2 SF4 . . . C 3 15.048 39.908 76.813 1 37.28 ? S2 SF4 600 A 1 HETATM 7 S S3 SF4 . . . C 3 17.707 40.31 79.231 1 40.48 ? S3 SF4 600 A 1 HETATM 8 S S4 SF4 . . . C 3 14.185 40.603 80.403 1 39.9 ? S4 SF4 600 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 476 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 8 #