data_3CSC
#
_model_server_result.job_id            SREqvyJED46MjYEDMKu3GQ 
_model_server_result.datetime_utc      '2024-12-21 14:55:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3csc 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":702}' 
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_entry.id    3CSC 
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_exptl.entry_id    3CSC 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              134.087 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-2-hydroxybutanedioic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          78.9 
_cell.angle_gamma         90 
_cell.entry_id            3CSC 
_cell.length_a            104 
_cell.length_b            78.1 
_cell.length_c            58.3 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3CSC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
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_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
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_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C4 H6 O5' 
_chem_comp.formula_weight    134.087 
_chem_comp.id                LMR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-2-hydroxybutanedioic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     L-Malate 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1A LMR doub 285 n n 
C1 O1B LMR sing 286 n n 
C1 C2 LMR sing 287 n n 
C2 O2 LMR sing 288 n n 
C2 C3 LMR sing 289 n n 
C3 C4 LMR sing 290 n n 
C4 O4A LMR sing 291 n n 
C4 O4B LMR doub 292 n n 
C2 H2 LMR sing 293 n n 
O2 HO2 LMR sing 294 n n 
C3 H3 LMR sing 295 n n 
C3 H3A LMR sing 296 n n 
O1B H4 LMR sing 297 n n 
O4A H5 LMR sing 298 n n 
#
_atom_sites.entry_id                     3CSC 
_atom_sites.fract_transf_matrix[1][1]    0.009615 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    -0.001886 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012804 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01748 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACO A 1 700 700 ACO ACO . 
C 3 LMR A 1 702 702 LMR LMR . 
D 4 HOH A 1 501 501 HOH HOH . 
D 4 HOH A 2 502 502 HOH HOH . 
D 4 HOH A 3 503 503 HOH HOH . 
D 4 HOH A 4 504 504 HOH HOH . 
D 4 HOH A 5 505 505 HOH HOH . 
D 4 HOH A 6 506 506 HOH HOH . 
D 4 HOH A 7 507 507 HOH HOH . 
D 4 HOH A 8 508 508 HOH HOH . 
D 4 HOH A 9 509 509 HOH HOH . 
D 4 HOH A 10 510 510 HOH HOH . 
D 4 HOH A 11 511 511 HOH HOH . 
D 4 HOH A 12 512 512 HOH HOH . 
D 4 HOH A 13 513 513 HOH HOH . 
D 4 HOH A 14 514 514 HOH HOH . 
D 4 HOH A 15 515 515 HOH HOH . 
D 4 HOH A 16 516 516 HOH HOH . 
D 4 HOH A 17 517 517 HOH HOH . 
D 4 HOH A 18 518 518 HOH HOH . 
D 4 HOH A 19 519 519 HOH HOH . 
D 4 HOH A 20 520 520 HOH HOH . 
D 4 HOH A 21 521 521 HOH HOH . 
D 4 HOH A 22 522 522 HOH HOH . 
D 4 HOH A 23 523 523 HOH HOH . 
D 4 HOH A 24 524 524 HOH HOH . 
D 4 HOH A 25 526 526 HOH HOH . 
D 4 HOH A 26 527 527 HOH HOH . 
D 4 HOH A 27 528 528 HOH HOH . 
D 4 HOH A 28 529 529 HOH HOH . 
D 4 HOH A 29 530 530 HOH HOH . 
D 4 HOH A 30 531 531 HOH HOH . 
D 4 HOH A 31 532 532 HOH HOH . 
D 4 HOH A 32 533 533 HOH HOH . 
D 4 HOH A 33 534 534 HOH HOH . 
D 4 HOH A 34 535 535 HOH HOH . 
D 4 HOH A 35 536 536 HOH HOH . 
D 4 HOH A 36 537 537 HOH HOH . 
D 4 HOH A 37 538 538 HOH HOH . 
D 4 HOH A 38 539 539 HOH HOH . 
D 4 HOH A 39 540 540 HOH HOH . 
D 4 HOH A 40 541 541 HOH HOH . 
D 4 HOH A 41 542 542 HOH HOH . 
D 4 HOH A 42 543 543 HOH HOH . 
D 4 HOH A 43 544 544 HOH HOH . 
D 4 HOH A 44 545 545 HOH HOH . 
D 4 HOH A 45 546 546 HOH HOH . 
D 4 HOH A 46 547 547 HOH HOH . 
D 4 HOH A 47 548 548 HOH HOH . 
D 4 HOH A 48 549 549 HOH HOH . 
D 4 HOH A 49 550 550 HOH HOH . 
D 4 HOH A 50 554 554 HOH HOH . 
D 4 HOH A 51 555 555 HOH HOH . 
D 4 HOH A 52 556 556 HOH HOH . 
D 4 HOH A 53 557 557 HOH HOH . 
D 4 HOH A 54 558 558 HOH HOH . 
D 4 HOH A 55 559 559 HOH HOH . 
D 4 HOH A 56 560 560 HOH HOH . 
D 4 HOH A 57 561 561 HOH HOH . 
D 4 HOH A 58 562 562 HOH HOH . 
D 4 HOH A 59 563 563 HOH HOH . 
D 4 HOH A 60 564 564 HOH HOH . 
D 4 HOH A 61 565 565 HOH HOH . 
D 4 HOH A 62 566 566 HOH HOH . 
D 4 HOH A 63 567 567 HOH HOH . 
D 4 HOH A 64 568 568 HOH HOH . 
D 4 HOH A 65 569 569 HOH HOH . 
D 4 HOH A 66 570 570 HOH HOH . 
D 4 HOH A 67 571 571 HOH HOH . 
D 4 HOH A 68 572 572 HOH HOH . 
D 4 HOH A 69 573 573 HOH HOH . 
D 4 HOH A 70 574 574 HOH HOH . 
D 4 HOH A 71 575 575 HOH HOH . 
D 4 HOH A 72 577 577 HOH HOH . 
D 4 HOH A 73 578 578 HOH HOH . 
D 4 HOH A 74 579 579 HOH HOH . 
D 4 HOH A 75 580 580 HOH HOH . 
D 4 HOH A 76 581 581 HOH HOH . 
D 4 HOH A 77 582 582 HOH HOH . 
D 4 HOH A 78 583 583 HOH HOH . 
D 4 HOH A 79 584 584 HOH HOH . 
D 4 HOH A 80 585 585 HOH HOH . 
D 4 HOH A 81 586 586 HOH HOH . 
D 4 HOH A 82 587 587 HOH HOH . 
D 4 HOH A 83 588 588 HOH HOH . 
D 4 HOH A 84 589 589 HOH HOH . 
D 4 HOH A 85 590 590 HOH HOH . 
D 4 HOH A 86 591 591 HOH HOH . 
D 4 HOH A 87 592 592 HOH HOH . 
D 4 HOH A 88 593 593 HOH HOH . 
D 4 HOH A 89 594 594 HOH HOH . 
D 4 HOH A 90 595 595 HOH HOH . 
D 4 HOH A 91 596 596 HOH HOH . 
D 4 HOH A 92 597 597 HOH HOH . 
D 4 HOH A 93 598 598 HOH HOH . 
D 4 HOH A 94 599 599 HOH HOH . 
D 4 HOH A 95 600 600 HOH HOH . 
D 4 HOH A 96 601 601 HOH HOH . 
D 4 HOH A 97 602 602 HOH HOH . 
D 4 HOH A 98 603 603 HOH HOH . 
D 4 HOH A 99 604 604 HOH HOH . 
D 4 HOH A 100 605 605 HOH HOH . 
D 4 HOH A 101 606 606 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 LMR . . . C 3 14.531 -5.431 -1.945 1 16.75 ? C1 LMR 702 A 1 
HETATM 2 O O1A LMR . . . C 3 15.476 -4.796 -2.37 1 30.01 ? O1A LMR 702 A 1 
HETATM 3 O O1B LMR . . . C 3 13.345 -5.203 -2.234 1 34.6 ? O1B LMR 702 A 1 
HETATM 4 C C2 LMR . . . C 3 14.805 -6.654 -1.166 1 12.98 ? C2 LMR 702 A 1 
HETATM 5 O O2 LMR . . . C 3 16.225 -6.707 -0.75 1 19.48 ? O2 LMR 702 A 1 
HETATM 6 C C3 LMR . . . C 3 13.814 -6.962 -0.107 1 31.2 ? C3 LMR 702 A 1 
HETATM 7 C C4 LMR . . . C 3 13.283 -8.338 -0.407 1 6.7 ? C4 LMR 702 A 1 
HETATM 8 O O4A LMR . . . C 3 12.395 -8.923 0.375 1 19.61 ? O4A LMR 702 A 1 
HETATM 9 O O4B LMR . . . C 3 13.799 -8.939 -1.494 1 13.64 ? O4B LMR 702 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           9 
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