data_3CSL
#
_model_server_result.job_id            pBRwwTXQ4jB0qQjt-ord4A 
_model_server_result.datetime_utc      '2024-11-21 14:22:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3csl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":866}' 
#
_entry.id    3CSL 
#
_exptl.entry_id    3CSL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3CSL 
_cell.length_a            157.02 
_cell.length_b            163.4 
_cell.length_c            595.53 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3CSL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        22 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H,I,J,N 1 1 
B,D,K,L,M,O,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 538 A CYS 538 1_555 A SG CYS 546 A CYS 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 715 A CYS 715 1_555 A SG CYS 750 A CYS 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 B SG CYS 538 B CYS 538 1_555 B SG CYS 546 B CYS 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf4 B SG CYS 715 B CYS 715 1_555 B SG CYS 750 B CYS 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc1 A NE2 HIS 189 A HIS 189 1_555 E FE HEM . A HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc2 A NE2 HIS 603 A HIS 603 1_555 E FE HEM . A HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc3 B NE2 HIS 189 B HIS 189 1_555 K FE HEM . B HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc4 B NE2 HIS 603 B HIS 603 1_555 K FE HEM . B HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 142 n n 
CHA C4D HEM doub 143 n n 
CHA HHA HEM sing 144 n n 
CHB C4A HEM sing 145 n n 
CHB C1B HEM doub 146 n n 
CHB HHB HEM sing 147 n n 
CHC C4B HEM sing 148 n n 
CHC C1C HEM doub 149 n n 
CHC HHC HEM sing 150 n n 
CHD C4C HEM doub 151 n n 
CHD C1D HEM sing 152 n n 
CHD HHD HEM sing 153 n n 
C1A C2A HEM doub 154 n y 
C1A NA HEM sing 155 n y 
C2A C3A HEM sing 156 n y 
C2A CAA HEM sing 157 n n 
C3A C4A HEM doub 158 n y 
C3A CMA HEM sing 159 n n 
C4A NA HEM sing 160 n y 
CMA HMA HEM sing 161 n n 
CMA HMAA HEM sing 162 n n 
CMA HMAB HEM sing 163 n n 
CAA CBA HEM sing 164 n n 
CAA HAA HEM sing 165 n n 
CAA HAAA HEM sing 166 n n 
CBA CGA HEM sing 167 n n 
CBA HBA HEM sing 168 n n 
CBA HBAA HEM sing 169 n n 
CGA O1A HEM doub 170 n n 
CGA O2A HEM sing 171 n n 
C1B C2B HEM sing 172 n n 
C1B NB HEM sing 173 n n 
C2B C3B HEM doub 174 n n 
C2B CMB HEM sing 175 n n 
C3B C4B HEM sing 176 n n 
C3B CAB HEM sing 177 n n 
C4B NB HEM doub 178 n n 
CMB HMB HEM sing 179 n n 
CMB HMBA HEM sing 180 n n 
CMB HMBB HEM sing 181 n n 
CAB CBB HEM doub 182 n n 
CAB HAB HEM sing 183 n n 
CBB HBB HEM sing 184 n n 
CBB HBBA HEM sing 185 n n 
C1C C2C HEM sing 186 n y 
C1C NC HEM sing 187 n y 
C2C C3C HEM doub 188 n y 
C2C CMC HEM sing 189 n n 
C3C C4C HEM sing 190 n y 
C3C CAC HEM sing 191 n n 
C4C NC HEM sing 192 n y 
CMC HMC HEM sing 193 n n 
CMC HMCA HEM sing 194 n n 
CMC HMCB HEM sing 195 n n 
CAC CBC HEM doub 196 n n 
CAC HAC HEM sing 197 n n 
CBC HBC HEM sing 198 n n 
CBC HBCA HEM sing 199 n n 
C1D C2D HEM sing 200 n n 
C1D ND HEM doub 201 n n 
C2D C3D HEM doub 202 n n 
C2D CMD HEM sing 203 n n 
C3D C4D HEM sing 204 n n 
C3D CAD HEM sing 205 n n 
C4D ND HEM sing 206 n n 
CMD HMD HEM sing 207 n n 
CMD HMDA HEM sing 208 n n 
CMD HMDB HEM sing 209 n n 
CAD CBD HEM sing 210 n n 
CAD HAD HEM sing 211 n n 
CAD HADA HEM sing 212 n n 
CBD CGD HEM sing 213 n n 
CBD HBD HEM sing 214 n n 
CBD HBDA HEM sing 215 n n 
CGD O1D HEM doub 216 n n 
CGD O2D HEM sing 217 n n 
O2A H2A HEM sing 218 n n 
O2D H2D HEM sing 219 n n 
FE NA HEM sing 220 n n 
FE NB HEM sing 221 n n 
FE NC HEM sing 222 n n 
FE ND HEM sing 223 n n 
#
_atom_sites.entry_id                     3CSL 
_atom_sites.fract_transf_matrix[1][1]    0.006369 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00612 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001679 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 HEM A 1 866 1 HEM HEM . 
F 4 GOL A 1 867 1 GOL GOL . 
G 4 GOL A 1 868 3 GOL GOL . 
H 4 GOL A 1 869 5 GOL GOL . 
I 4 GOL A 1 870 6 GOL GOL . 
J 4 GOL A 1 871 7 GOL GOL . 
K 3 HEM B 1 866 2 HEM HEM . 
L 4 GOL B 1 867 2 GOL GOL . 
M 4 GOL B 1 868 4 GOL GOL . 
N 5 HOH A 1 872 1 HOH HOH . 
N 5 HOH A 2 873 2 HOH HOH . 
N 5 HOH A 3 874 3 HOH HOH . 
N 5 HOH A 4 875 4 HOH HOH . 
N 5 HOH A 5 876 7 HOH HOH . 
N 5 HOH A 6 877 8 HOH HOH . 
N 5 HOH A 7 878 10 HOH HOH . 
N 5 HOH A 8 879 13 HOH HOH . 
N 5 HOH A 9 880 16 HOH HOH . 
N 5 HOH A 10 881 18 HOH HOH . 
N 5 HOH A 11 882 19 HOH HOH . 
N 5 HOH A 12 883 20 HOH HOH . 
N 5 HOH A 13 884 22 HOH HOH . 
N 5 HOH A 14 885 23 HOH HOH . 
N 5 HOH A 15 886 27 HOH HOH . 
N 5 HOH A 16 887 29 HOH HOH . 
N 5 HOH A 17 888 30 HOH HOH . 
N 5 HOH A 18 889 32 HOH HOH . 
N 5 HOH A 19 890 33 HOH HOH . 
N 5 HOH A 20 891 34 HOH HOH . 
N 5 HOH A 21 892 35 HOH HOH . 
N 5 HOH A 22 893 37 HOH HOH . 
N 5 HOH A 23 894 38 HOH HOH . 
N 5 HOH A 24 895 39 HOH HOH . 
N 5 HOH A 25 896 41 HOH HOH . 
N 5 HOH A 26 897 43 HOH HOH . 
O 5 HOH B 1 869 6 HOH HOH . 
O 5 HOH B 2 870 9 HOH HOH . 
O 5 HOH B 3 871 11 HOH HOH . 
O 5 HOH B 4 872 12 HOH HOH . 
O 5 HOH B 5 873 14 HOH HOH . 
O 5 HOH B 6 874 15 HOH HOH . 
O 5 HOH B 7 875 17 HOH HOH . 
O 5 HOH B 8 876 21 HOH HOH . 
O 5 HOH B 9 877 24 HOH HOH . 
O 5 HOH B 10 878 25 HOH HOH . 
O 5 HOH B 11 879 26 HOH HOH . 
O 5 HOH B 12 880 28 HOH HOH . 
O 5 HOH B 13 881 31 HOH HOH . 
O 5 HOH B 14 882 36 HOH HOH . 
O 5 HOH B 15 883 40 HOH HOH . 
O 5 HOH B 16 884 42 HOH HOH . 
P 5 HOH D 1 189 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . K 3 92.232 7.686 184.57 1 65.53 ? CHA HEM 866 B 1 
HETATM 2 C CHB HEM . . . K 3 94.681 4.757 187.558 1 90.61 ? CHB HEM 866 B 1 
HETATM 3 C CHC HEM . . . K 3 98.775 7.13 186.474 1 67.87 ? CHC HEM 866 B 1 
HETATM 4 C CHD HEM . . . K 3 96.349 10.081 183.48 1 71.84 ? CHD HEM 866 B 1 
HETATM 5 C C1A HEM . . . K 3 92.546 6.692 185.463 1 69.24 ? C1A HEM 866 B 1 
HETATM 6 C C2A HEM . . . K 3 91.604 5.747 186.016 1 80.75 ? C2A HEM 866 B 1 
HETATM 7 C C3A HEM . . . K 3 92.267 4.936 186.844 1 86.61 ? C3A HEM 866 B 1 
HETATM 8 C C4A HEM . . . K 3 93.661 5.337 186.838 1 76.16 ? C4A HEM 866 B 1 
HETATM 9 C CMA HEM . . . K 3 91.668 3.769 187.659 1 81.34 ? CMA HEM 866 B 1 
HETATM 10 C CAA HEM . . . K 3 90.099 5.721 185.678 1 111.38 ? CAA HEM 866 B 1 
HETATM 11 C CBA HEM . . . K 3 89.799 4.474 184.852 1 133.47 ? CBA HEM 866 B 1 
HETATM 12 C CGA HEM . . . K 3 88.779 4.801 183.793 1 143.65 ? CGA HEM 866 B 1 
HETATM 13 O O1A HEM . . . K 3 88.509 3.928 182.928 1 125.67 ? O1A HEM 866 B 1 
HETATM 14 O O2A HEM . . . K 3 88.239 5.937 183.81 1 162.84 ? O2A HEM 866 B 1 
HETATM 15 C C1B HEM . . . K 3 96.001 5.147 187.534 1 70.8 ? C1B HEM 866 B 1 
HETATM 16 C C2B HEM . . . K 3 97.081 4.545 188.29 1 72.62 ? C2B HEM 866 B 1 
HETATM 17 C C3B HEM . . . K 3 98.208 5.193 187.992 1 83 ? C3B HEM 866 B 1 
HETATM 18 C C4B HEM . . . K 3 97.887 6.238 187.035 1 68.86 ? C4B HEM 866 B 1 
HETATM 19 C CMB HEM . . . K 3 96.96 3.36 189.276 1 57.64 ? CMB HEM 866 B 1 
HETATM 20 C CAB HEM . . . K 3 99.596 4.869 188.587 1 80.34 ? CAB HEM 866 B 1 
HETATM 21 C CBB HEM . . . K 3 100.681 5.549 188.207 1 128.49 ? CBB HEM 866 B 1 
HETATM 22 C C1C HEM . . . K 3 98.48 8.125 185.567 1 82.35 ? C1C HEM 866 B 1 
HETATM 23 C C2C HEM . . . K 3 99.429 9.055 184.984 1 71.5 ? C2C HEM 866 B 1 
HETATM 24 C C3C HEM . . . K 3 98.754 9.868 184.159 1 73.34 ? C3C HEM 866 B 1 
HETATM 25 C C4C HEM . . . K 3 97.361 9.48 184.192 1 67.76 ? C4C HEM 866 B 1 
HETATM 26 C CMC HEM . . . K 3 100.945 9.071 185.284 1 73.28 ? CMC HEM 866 B 1 
HETATM 27 C CAC HEM . . . K 3 99.304 11.026 183.293 1 79.33 ? CAC HEM 866 B 1 
HETATM 28 C CBC HEM . . . K 3 100.61 11.296 183.217 1 108.63 ? CBC HEM 866 B 1 
HETATM 29 C C1D HEM . . . K 3 95.019 9.73 183.493 1 79.28 ? C1D HEM 866 B 1 
HETATM 30 C C2D HEM . . . K 3 93.982 10.392 182.732 1 83.96 ? C2D HEM 866 B 1 
HETATM 31 C C3D HEM . . . K 3 92.684 9.649 183.071 1 86.2 ? C3D HEM 866 B 1 
HETATM 32 C C4D HEM . . . K 3 93.08 8.609 184.003 1 81.67 ? C4D HEM 866 B 1 
HETATM 33 C CMD HEM . . . K 3 94.145 11.603 181.788 1 90.44 ? CMD HEM 866 B 1 
HETATM 34 C CAD HEM . . . K 3 91.272 9.97 182.523 1 90.24 ? CAD HEM 866 B 1 
HETATM 35 C CBD HEM . . . K 3 90.193 9.463 183.479 1 115.89 ? CBD HEM 866 B 1 
HETATM 36 C CGD HEM . . . K 3 88.965 10.33 183.409 1 148.13 ? CGD HEM 866 B 1 
HETATM 37 O O1D HEM . . . K 3 87.911 9.911 183.953 1 169.3 ? O1D HEM 866 B 1 
HETATM 38 O O2D HEM . . . K 3 89.04 11.434 182.812 1 153.37 ? O2D HEM 866 B 1 
HETATM 39 N NA HEM . . . K 3 93.794 6.416 185.984 1 62.82 ? NA HEM 866 B 1 
HETATM 40 N NB HEM . . . K 3 96.529 6.176 186.774 1 53.2 ? NB HEM 866 B 1 
HETATM 41 N NC HEM . . . K 3 97.227 8.417 185.061 1 64.03 ? NC HEM 866 B 1 
HETATM 42 N ND HEM . . . K 3 94.453 8.689 184.221 1 38 ? ND HEM 866 B 1 
HETATM 43 FE FE HEM . . . K 3 95.494 7.418 185.477 1 70.94 ? FE HEM 866 B 1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    49 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#