data_3CSL # _model_server_result.job_id tmXDc6CNzdTzgqX-dysnlw _model_server_result.datetime_utc '2024-11-21 14:28:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3csl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":868}' # _entry.id 3CSL # _exptl.entry_id 3CSL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CSL _cell.length_a 157.02 _cell.length_b 163.4 _cell.length_c 595.53 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CSL _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,N 1 1 B,D,K,L,M,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 L N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 538 A CYS 538 1_555 A SG CYS 546 A CYS 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 715 A CYS 715 1_555 A SG CYS 750 A CYS 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 B SG CYS 538 B CYS 538 1_555 B SG CYS 546 B CYS 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 715 B CYS 715 1_555 B SG CYS 750 B CYS 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A NE2 HIS 189 A HIS 189 1_555 E FE HEM . A HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc2 A NE2 HIS 603 A HIS 603 1_555 E FE HEM . A HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc3 B NE2 HIS 189 B HIS 189 1_555 K FE HEM . B HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc4 B NE2 HIS 603 B HIS 603 1_555 K FE HEM . B HEM 866 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3CSL _atom_sites.fract_transf_matrix[1][1] 0.006369 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00612 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 866 1 HEM HEM . F 4 GOL A 1 867 1 GOL GOL . G 4 GOL A 1 868 3 GOL GOL . H 4 GOL A 1 869 5 GOL GOL . I 4 GOL A 1 870 6 GOL GOL . J 4 GOL A 1 871 7 GOL GOL . K 3 HEM B 1 866 2 HEM HEM . L 4 GOL B 1 867 2 GOL GOL . M 4 GOL B 1 868 4 GOL GOL . N 5 HOH A 1 872 1 HOH HOH . N 5 HOH A 2 873 2 HOH HOH . N 5 HOH A 3 874 3 HOH HOH . N 5 HOH A 4 875 4 HOH HOH . N 5 HOH A 5 876 7 HOH HOH . N 5 HOH A 6 877 8 HOH HOH . N 5 HOH A 7 878 10 HOH HOH . N 5 HOH A 8 879 13 HOH HOH . N 5 HOH A 9 880 16 HOH HOH . N 5 HOH A 10 881 18 HOH HOH . N 5 HOH A 11 882 19 HOH HOH . N 5 HOH A 12 883 20 HOH HOH . N 5 HOH A 13 884 22 HOH HOH . N 5 HOH A 14 885 23 HOH HOH . N 5 HOH A 15 886 27 HOH HOH . N 5 HOH A 16 887 29 HOH HOH . N 5 HOH A 17 888 30 HOH HOH . N 5 HOH A 18 889 32 HOH HOH . N 5 HOH A 19 890 33 HOH HOH . N 5 HOH A 20 891 34 HOH HOH . N 5 HOH A 21 892 35 HOH HOH . N 5 HOH A 22 893 37 HOH HOH . N 5 HOH A 23 894 38 HOH HOH . N 5 HOH A 24 895 39 HOH HOH . N 5 HOH A 25 896 41 HOH HOH . N 5 HOH A 26 897 43 HOH HOH . O 5 HOH B 1 869 6 HOH HOH . O 5 HOH B 2 870 9 HOH HOH . O 5 HOH B 3 871 11 HOH HOH . O 5 HOH B 4 872 12 HOH HOH . O 5 HOH B 5 873 14 HOH HOH . O 5 HOH B 6 874 15 HOH HOH . O 5 HOH B 7 875 17 HOH HOH . O 5 HOH B 8 876 21 HOH HOH . O 5 HOH B 9 877 24 HOH HOH . O 5 HOH B 10 878 25 HOH HOH . O 5 HOH B 11 879 26 HOH HOH . O 5 HOH B 12 880 28 HOH HOH . O 5 HOH B 13 881 31 HOH HOH . O 5 HOH B 14 882 36 HOH HOH . O 5 HOH B 15 883 40 HOH HOH . O 5 HOH B 16 884 42 HOH HOH . P 5 HOH D 1 189 5 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 79.436 76.639 214.015 1 98.04 ? C1 GOL 868 A 1 HETATM 2 O O1 GOL . . . G 4 78.952 77.16 212.796 1 82.83 ? O1 GOL 868 A 1 HETATM 3 C C2 GOL . . . G 4 79.111 77.604 215.151 1 113.16 ? C2 GOL 868 A 1 HETATM 4 O O2 GOL . . . G 4 78.509 78.756 214.605 1 137.93 ? O2 GOL 868 A 1 HETATM 5 C C3 GOL . . . G 4 80.388 78.009 215.881 1 82.67 ? C3 GOL 868 A 1 HETATM 6 O O3 GOL . . . G 4 80.081 78.396 217.204 1 49.45 ? O3 GOL 868 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #