data_3CSM # _model_server_result.job_id LtVLgconV0NxrBHSw-Q-5g _model_server_result.datetime_utc '2024-11-16 17:42:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3csm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":300}' # _entry.id 3CSM # _exptl.entry_id 3CSM _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'TRYPTOPHAN BOUND TO A REGULATORY SITE' _entity.formula_weight 204.225 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRYPTOPHAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3CSM _cell.length_a 203.5 _cell.length_b 203.5 _cell.length_c 128.7 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CSM _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,C,D 2 1,2 B,E,F 3 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 101.75 58.74539 42.9 3 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C11 H12 N2 O2' _chem_comp.formula_weight 204.225 _chem_comp.id TRP _chem_comp.mon_nstd_flag y _chem_comp.name TRYPTOPHAN _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA TRP sing 304 n n N H TRP sing 305 n n N H2 TRP sing 306 n n CA C TRP sing 307 n n CA CB TRP sing 308 n n CA HA TRP sing 309 n n C O TRP doub 310 n n C OXT TRP sing 311 n n CB CG TRP sing 312 n n CB HB2 TRP sing 313 n n CB HB3 TRP sing 314 n n CG CD1 TRP doub 315 n y CG CD2 TRP sing 316 n y CD1 NE1 TRP sing 317 n y CD1 HD1 TRP sing 318 n n CD2 CE2 TRP doub 319 n y CD2 CE3 TRP sing 320 n y NE1 CE2 TRP sing 321 n y NE1 HE1 TRP sing 322 n n CE2 CZ2 TRP sing 323 n y CE3 CZ3 TRP doub 324 n y CE3 HE3 TRP sing 325 n n CZ2 CH2 TRP doub 326 n y CZ2 HZ2 TRP sing 327 n n CZ3 CH2 TRP sing 328 n y CZ3 HZ3 TRP sing 329 n n CH2 HH2 TRP sing 330 n n OXT HXT TRP sing 331 n n # _atom_sites.entry_id 3CSM _atom_sites.fract_transf_matrix[1][1] 0.004914 _atom_sites.fract_transf_matrix[1][2] 0.002837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00777 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRP A 1 300 300 TRP TRP . D 3 TSA A 1 400 400 TSA BAR . E 2 TRP B 1 300 300 TRP TRP . F 3 TSA B 1 400 400 TSA BAR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N TRP . . . C 2 58.066 14.442 35.434 1 21.84 ? N TRP 300 A 1 HETATM 2 C CA TRP . . . C 2 58.749 13.224 35.931 1 24.57 ? CA TRP 300 A 1 HETATM 3 C C TRP . . . C 2 60.252 13.337 36.085 1 20.58 ? C TRP 300 A 1 HETATM 4 O O TRP . . . C 2 60.828 13.666 35.04 1 22.33 ? O TRP 300 A 1 HETATM 5 C CB TRP . . . C 2 58.417 12.07 35.016 1 23.34 ? CB TRP 300 A 1 HETATM 6 C CG TRP . . . C 2 58.484 12.41 33.569 1 19.69 ? CG TRP 300 A 1 HETATM 7 C CD1 TRP . . . C 2 57.543 13.091 32.846 1 19.85 ? CD1 TRP 300 A 1 HETATM 8 C CD2 TRP . . . C 2 59.476 11.969 32.629 1 18.69 ? CD2 TRP 300 A 1 HETATM 9 N NE1 TRP . . . C 2 57.877 13.085 31.496 1 16.53 ? NE1 TRP 300 A 1 HETATM 10 C CE2 TRP . . . C 2 59.053 12.399 31.335 1 15.5 ? CE2 TRP 300 A 1 HETATM 11 C CE3 TRP . . . C 2 60.672 11.242 32.743 1 12.67 ? CE3 TRP 300 A 1 HETATM 12 C CZ2 TRP . . . C 2 59.788 12.117 30.165 1 8.96 ? CZ2 TRP 300 A 1 HETATM 13 C CZ3 TRP . . . C 2 61.403 10.962 31.566 1 14.9 ? CZ3 TRP 300 A 1 HETATM 14 C CH2 TRP . . . C 2 60.946 11.402 30.293 1 2 ? CH2 TRP 300 A 1 HETATM 15 O OXT TRP . . . C 2 60.753 13.104 37.184 1 20 ? OXT TRP 300 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #