data_3CSM # _model_server_result.job_id nln90YLaVW7wkZN2CQJVCA _model_server_result.datetime_utc '2024-11-16 17:51:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3csm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":400}' # _entry.id 3CSM # _exptl.entry_id 3CSM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.199 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3CSM _cell.length_a 203.5 _cell.length_b 203.5 _cell.length_c 128.7 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CSM _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,C,D 2 1,2 B,E,F 3 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 101.75 58.74539 42.9 3 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C10 H12 O6' _chem_comp.formula_weight 228.199 _chem_comp.id TSA _chem_comp.mon_nstd_flag . _chem_comp.name '8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TSA sing 332 n n C1 C6 TSA sing 333 n n C1 C9 TSA sing 334 n n C1 C10 TSA sing 335 n n C2 C3 TSA doub 336 n n C2 H2 TSA sing 337 n n C3 C4 TSA sing 338 n n C3 H3 TSA sing 339 n n C4 O5 TSA sing 340 n n C4 C5 TSA sing 341 n n C4 H4 TSA sing 342 n n O5 HO5 TSA sing 343 n n C5 C6 TSA sing 344 n n C5 O7 TSA sing 345 n n C5 H5 TSA sing 346 n n C6 H61 TSA sing 347 n n C6 H62 TSA sing 348 n n O7 C8 TSA sing 349 n n C8 C9 TSA sing 350 n n C8 C11 TSA sing 351 n n C8 H8 TSA sing 352 n n C9 H91 TSA sing 353 n n C9 H92 TSA sing 354 n n C10 O1 TSA doub 355 n n C10 O2 TSA sing 356 n n O2 HO2 TSA sing 357 n n C11 O3 TSA doub 358 n n C11 O4 TSA sing 359 n n O4 HO4 TSA sing 360 n n # _atom_sites.entry_id 3CSM _atom_sites.fract_transf_matrix[1][1] 0.004914 _atom_sites.fract_transf_matrix[1][2] 0.002837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00777 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TRP A 1 300 300 TRP TRP . D 3 TSA A 1 400 400 TSA BAR . E 2 TRP B 1 300 300 TRP TRP . F 3 TSA B 1 400 400 TSA BAR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TSA . . . F 3 37.693 24.043 -9.584 1 87.58 ? C1 TSA 400 B 1 HETATM 2 C C2 TSA . . . F 3 38.704 25.154 -9.846 1 90.29 ? C2 TSA 400 B 1 HETATM 3 C C3 TSA . . . F 3 39.958 25.031 -10.362 1 87.92 ? C3 TSA 400 B 1 HETATM 4 C C4 TSA . . . F 3 40.438 23.694 -10.873 1 87.17 ? C4 TSA 400 B 1 HETATM 5 O O5 TSA . . . F 3 41.696 23.593 -10.219 1 84.37 ? O5 TSA 400 B 1 HETATM 6 C C5 TSA . . . F 3 39.359 22.554 -10.766 1 87.15 ? C5 TSA 400 B 1 HETATM 7 C C6 TSA . . . F 3 38.479 22.718 -9.503 1 87.25 ? C6 TSA 400 B 1 HETATM 8 O O7 TSA . . . F 3 38.464 22.344 -11.879 1 84.8 ? O7 TSA 400 B 1 HETATM 9 C C8 TSA . . . F 3 37.476 23.333 -12.157 1 87.39 ? C8 TSA 400 B 1 HETATM 10 C C9 TSA . . . F 3 36.862 23.894 -10.857 1 88 ? C9 TSA 400 B 1 HETATM 11 C C10 TSA . . . F 3 36.747 24.392 -8.36 1 88.52 ? C10 TSA 400 B 1 HETATM 12 O O1 TSA . . . F 3 36.26 25.552 -8.278 1 88.58 ? O1 TSA 400 B 1 HETATM 13 O O2 TSA . . . F 3 36.482 23.535 -7.47 1 86.98 ? O2 TSA 400 B 1 HETATM 14 C C11 TSA . . . F 3 37.936 24.403 -13.207 1 90.71 ? C11 TSA 400 B 1 HETATM 15 O O3 TSA . . . F 3 37.473 25.566 -13.277 1 89.27 ? O3 TSA 400 B 1 HETATM 16 O O4 TSA . . . F 3 38.808 24.069 -14.005 1 96.69 ? O4 TSA 400 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #