data_3CSX # _model_server_result.job_id CxoQfmHpnenafkCH9shxbA _model_server_result.datetime_utc '2024-10-10 02:25:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3csx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":78}' # _entry.id 3CSX # _exptl.entry_id 3CSX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.7 _cell.angle_gamma 90 _cell.entry_id 3CSX _cell.length_a 29.436 _cell.length_b 38.381 _cell.length_c 62.643 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CSX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,C,D 2 2 B,E 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y+1/2,-z+1 -1 0 0 0 1 0 0 0 -1 -7.308605 19.1905 62.215189 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 39 A HIS 36 1_555 C NI NI . A NI 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc2 C NI NI . A NI 78 1_555 D O HOH . A HOH 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CSX _atom_sites.fract_transf_matrix[1][1] 0.033972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003988 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026055 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NI A 1 78 1 NI NI . D 3 HOH A 1 79 1 HOH HOH . D 3 HOH A 2 80 3 HOH HOH . D 3 HOH A 3 81 7 HOH HOH . D 3 HOH A 4 82 8 HOH HOH . D 3 HOH A 5 83 10 HOH HOH . D 3 HOH A 6 84 11 HOH HOH . D 3 HOH A 7 85 14 HOH HOH . D 3 HOH A 8 86 18 HOH HOH . D 3 HOH A 9 87 21 HOH HOH . D 3 HOH A 10 88 27 HOH HOH . D 3 HOH A 11 89 33 HOH HOH . D 3 HOH A 12 90 34 HOH HOH . D 3 HOH A 13 91 38 HOH HOH . D 3 HOH A 14 92 40 HOH HOH . D 3 HOH A 15 93 43 HOH HOH . D 3 HOH A 16 94 45 HOH HOH . D 3 HOH A 17 95 49 HOH HOH . D 3 HOH A 18 96 50 HOH HOH . D 3 HOH A 19 97 51 HOH HOH . D 3 HOH A 20 98 53 HOH HOH . D 3 HOH A 21 99 55 HOH HOH . D 3 HOH A 22 100 56 HOH HOH . D 3 HOH A 23 101 58 HOH HOH . D 3 HOH A 24 102 60 HOH HOH . D 3 HOH A 25 103 66 HOH HOH . D 3 HOH A 26 104 67 HOH HOH . D 3 HOH A 27 105 69 HOH HOH . D 3 HOH A 28 106 70 HOH HOH . D 3 HOH A 29 107 71 HOH HOH . D 3 HOH A 30 108 73 HOH HOH . D 3 HOH A 31 109 74 HOH HOH . D 3 HOH A 32 110 75 HOH HOH . D 3 HOH A 33 111 76 HOH HOH . D 3 HOH A 34 112 77 HOH HOH . D 3 HOH A 35 113 78 HOH HOH . D 3 HOH A 36 114 79 HOH HOH . D 3 HOH A 37 115 81 HOH HOH . D 3 HOH A 38 116 83 HOH HOH . D 3 HOH A 39 117 84 HOH HOH . D 3 HOH A 40 118 85 HOH HOH . D 3 HOH A 41 119 86 HOH HOH . D 3 HOH A 42 120 87 HOH HOH . D 3 HOH A 43 121 90 HOH HOH . D 3 HOH A 44 122 92 HOH HOH . D 3 HOH A 45 123 94 HOH HOH . D 3 HOH A 46 124 96 HOH HOH . D 3 HOH A 47 125 16 HOH HOH . E 3 HOH B 1 92 39 HOH HOH . E 3 HOH B 2 93 2 HOH HOH . E 3 HOH B 3 94 4 HOH HOH . E 3 HOH B 4 95 5 HOH HOH . E 3 HOH B 5 96 6 HOH HOH . E 3 HOH B 6 97 9 HOH HOH . E 3 HOH B 7 98 12 HOH HOH . E 3 HOH B 8 99 13 HOH HOH . E 3 HOH B 9 100 15 HOH HOH . E 3 HOH B 10 101 17 HOH HOH . E 3 HOH B 11 102 19 HOH HOH . E 3 HOH B 12 103 20 HOH HOH . E 3 HOH B 13 104 22 HOH HOH . E 3 HOH B 14 105 23 HOH HOH . E 3 HOH B 15 106 24 HOH HOH . E 3 HOH B 16 107 25 HOH HOH . E 3 HOH B 17 108 26 HOH HOH . E 3 HOH B 18 109 28 HOH HOH . E 3 HOH B 19 110 29 HOH HOH . E 3 HOH B 20 111 30 HOH HOH . E 3 HOH B 21 112 31 HOH HOH . E 3 HOH B 22 113 32 HOH HOH . E 3 HOH B 23 114 35 HOH HOH . E 3 HOH B 24 115 36 HOH HOH . E 3 HOH B 25 116 37 HOH HOH . E 3 HOH B 26 117 41 HOH HOH . E 3 HOH B 27 118 42 HOH HOH . E 3 HOH B 28 119 44 HOH HOH . E 3 HOH B 29 120 46 HOH HOH . E 3 HOH B 30 121 47 HOH HOH . E 3 HOH B 31 122 48 HOH HOH . E 3 HOH B 32 123 52 HOH HOH . E 3 HOH B 33 124 54 HOH HOH . E 3 HOH B 34 125 57 HOH HOH . E 3 HOH B 35 126 59 HOH HOH . E 3 HOH B 36 127 61 HOH HOH . E 3 HOH B 37 128 62 HOH HOH . E 3 HOH B 38 129 63 HOH HOH . E 3 HOH B 39 130 64 HOH HOH . E 3 HOH B 40 131 65 HOH HOH . E 3 HOH B 41 132 68 HOH HOH . E 3 HOH B 42 133 72 HOH HOH . E 3 HOH B 43 134 80 HOH HOH . E 3 HOH B 44 135 82 HOH HOH . E 3 HOH B 45 136 88 HOH HOH . E 3 HOH B 46 137 89 HOH HOH . E 3 HOH B 47 138 91 HOH HOH . E 3 HOH B 48 139 93 HOH HOH . E 3 HOH B 49 140 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.691 _atom_site.Cartn_y 17.168 _atom_site.Cartn_z 35.881 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 19.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 78 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #