data_3CU3 # _model_server_result.job_id wGaUm5qmOgIToAbq5oGXWQ _model_server_result.datetime_utc '2024-11-04 22:55:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":173}' # _entry.id 3CU3 # _exptl.entry_id 3CU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CU3 _cell.length_a 50.51 _cell.length_b 71.9 _cell.length_c 117.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 -x,-y+1/2,z -1 0 0 0 -1 0 0 0 1 0 35.95 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 24 A GLN 23 1_555 A N MSE 25 A MSE 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 25 A MSE 24 1_555 A N ILE 26 A ILE 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C LEU 94 A LEU 93 1_555 A N MSE 95 A MSE 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale4 A C MSE 95 A MSE 94 1_555 A N LEU 96 A LEU 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 B MG MG . A MG 172 1_555 H O HOH . A HOH 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc2 B MG MG . A MG 172 1_555 H O HOH . A HOH 227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc3 B MG MG . A MG 172 1_555 H O HOH . A HOH 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc4 B MG MG . A MG 172 1_555 H O HOH . A HOH 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc5 B MG MG . A MG 172 1_555 H O HOH . A HOH 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? metalc ? metalc6 B MG MG . A MG 172 1_555 H O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 3CU3 _atom_sites.fract_transf_matrix[1][1] 0.019798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 172 1 MG MG . C 3 EDO A 1 173 3 EDO EDO . D 3 EDO A 1 174 4 EDO EDO . E 3 EDO A 1 175 5 EDO EDO . F 3 EDO A 1 176 6 EDO EDO . G 4 PEG A 1 177 2 PEG PEG . H 5 HOH A 1 178 7 HOH HOH . H 5 HOH A 2 179 8 HOH HOH . H 5 HOH A 3 180 9 HOH HOH . H 5 HOH A 4 181 10 HOH HOH . H 5 HOH A 5 182 11 HOH HOH . H 5 HOH A 6 183 12 HOH HOH . H 5 HOH A 7 184 13 HOH HOH . H 5 HOH A 8 185 14 HOH HOH . H 5 HOH A 9 186 15 HOH HOH . H 5 HOH A 10 187 16 HOH HOH . H 5 HOH A 11 188 17 HOH HOH . H 5 HOH A 12 189 18 HOH HOH . H 5 HOH A 13 190 19 HOH HOH . H 5 HOH A 14 191 20 HOH HOH . H 5 HOH A 15 192 21 HOH HOH . H 5 HOH A 16 193 22 HOH HOH . H 5 HOH A 17 194 23 HOH HOH . H 5 HOH A 18 195 24 HOH HOH . H 5 HOH A 19 196 25 HOH HOH . H 5 HOH A 20 197 26 HOH HOH . H 5 HOH A 21 198 27 HOH HOH . H 5 HOH A 22 199 28 HOH HOH . H 5 HOH A 23 200 29 HOH HOH . H 5 HOH A 24 201 30 HOH HOH . H 5 HOH A 25 202 31 HOH HOH . H 5 HOH A 26 203 32 HOH HOH . H 5 HOH A 27 204 33 HOH HOH . H 5 HOH A 28 205 34 HOH HOH . H 5 HOH A 29 206 35 HOH HOH . H 5 HOH A 30 207 36 HOH HOH . H 5 HOH A 31 208 37 HOH HOH . H 5 HOH A 32 209 38 HOH HOH . H 5 HOH A 33 210 39 HOH HOH . H 5 HOH A 34 211 40 HOH HOH . H 5 HOH A 35 212 41 HOH HOH . H 5 HOH A 36 213 42 HOH HOH . H 5 HOH A 37 214 43 HOH HOH . H 5 HOH A 38 215 44 HOH HOH . H 5 HOH A 39 216 45 HOH HOH . H 5 HOH A 40 217 46 HOH HOH . H 5 HOH A 41 218 47 HOH HOH . H 5 HOH A 42 219 48 HOH HOH . H 5 HOH A 43 220 49 HOH HOH . H 5 HOH A 44 221 50 HOH HOH . H 5 HOH A 45 222 51 HOH HOH . H 5 HOH A 46 223 52 HOH HOH . H 5 HOH A 47 224 53 HOH HOH . H 5 HOH A 48 225 54 HOH HOH . H 5 HOH A 49 226 55 HOH HOH . H 5 HOH A 50 227 56 HOH HOH . H 5 HOH A 51 228 57 HOH HOH . H 5 HOH A 52 229 58 HOH HOH . H 5 HOH A 53 230 59 HOH HOH . H 5 HOH A 54 231 60 HOH HOH . H 5 HOH A 55 232 61 HOH HOH . H 5 HOH A 56 233 62 HOH HOH . H 5 HOH A 57 234 63 HOH HOH . H 5 HOH A 58 235 64 HOH HOH . H 5 HOH A 59 236 65 HOH HOH . H 5 HOH A 60 237 66 HOH HOH . H 5 HOH A 61 238 67 HOH HOH . H 5 HOH A 62 239 68 HOH HOH . H 5 HOH A 63 240 69 HOH HOH . H 5 HOH A 64 241 70 HOH HOH . H 5 HOH A 65 242 71 HOH HOH . H 5 HOH A 66 243 72 HOH HOH . H 5 HOH A 67 244 73 HOH HOH . H 5 HOH A 68 245 74 HOH HOH . H 5 HOH A 69 246 75 HOH HOH . H 5 HOH A 70 247 76 HOH HOH . H 5 HOH A 71 248 77 HOH HOH . H 5 HOH A 72 249 78 HOH HOH . H 5 HOH A 73 250 79 HOH HOH . H 5 HOH A 74 251 80 HOH HOH . H 5 HOH A 75 252 81 HOH HOH . H 5 HOH A 76 253 82 HOH HOH . H 5 HOH A 77 254 83 HOH HOH . H 5 HOH A 78 255 84 HOH HOH . H 5 HOH A 79 256 85 HOH HOH . H 5 HOH A 80 257 86 HOH HOH . H 5 HOH A 81 258 87 HOH HOH . H 5 HOH A 82 259 88 HOH HOH . H 5 HOH A 83 260 89 HOH HOH . H 5 HOH A 84 261 90 HOH HOH . H 5 HOH A 85 262 91 HOH HOH . H 5 HOH A 86 263 92 HOH HOH . H 5 HOH A 87 264 93 HOH HOH . H 5 HOH A 88 265 94 HOH HOH . H 5 HOH A 89 266 95 HOH HOH . H 5 HOH A 90 267 96 HOH HOH . H 5 HOH A 91 268 97 HOH HOH . H 5 HOH A 92 269 98 HOH HOH . H 5 HOH A 93 270 99 HOH HOH . H 5 HOH A 94 271 100 HOH HOH . H 5 HOH A 95 272 101 HOH HOH . H 5 HOH A 96 273 102 HOH HOH . H 5 HOH A 97 274 103 HOH HOH . H 5 HOH A 98 275 104 HOH HOH . H 5 HOH A 99 276 105 HOH HOH . H 5 HOH A 100 277 106 HOH HOH . H 5 HOH A 101 278 107 HOH HOH . H 5 HOH A 102 279 108 HOH HOH . H 5 HOH A 103 280 109 HOH HOH . H 5 HOH A 104 281 110 HOH HOH . H 5 HOH A 105 282 111 HOH HOH . H 5 HOH A 106 283 112 HOH HOH . H 5 HOH A 107 284 113 HOH HOH . H 5 HOH A 108 285 114 HOH HOH . H 5 HOH A 109 286 115 HOH HOH . H 5 HOH A 110 287 116 HOH HOH . H 5 HOH A 111 288 117 HOH HOH . H 5 HOH A 112 289 118 HOH HOH . H 5 HOH A 113 290 119 HOH HOH . H 5 HOH A 114 291 120 HOH HOH . H 5 HOH A 115 292 121 HOH HOH . H 5 HOH A 116 293 122 HOH HOH . H 5 HOH A 117 294 123 HOH HOH . H 5 HOH A 118 295 124 HOH HOH . H 5 HOH A 119 296 125 HOH HOH . H 5 HOH A 120 297 126 HOH HOH . H 5 HOH A 121 298 127 HOH HOH . H 5 HOH A 122 299 128 HOH HOH . H 5 HOH A 123 300 129 HOH HOH . H 5 HOH A 124 301 130 HOH HOH . H 5 HOH A 125 302 131 HOH HOH . H 5 HOH A 126 303 132 HOH HOH . H 5 HOH A 127 304 133 HOH HOH . H 5 HOH A 128 305 134 HOH HOH . H 5 HOH A 129 306 135 HOH HOH . H 5 HOH A 130 307 136 HOH HOH . H 5 HOH A 131 308 137 HOH HOH . H 5 HOH A 132 309 138 HOH HOH . H 5 HOH A 133 310 139 HOH HOH . H 5 HOH A 134 311 140 HOH HOH . H 5 HOH A 135 312 141 HOH HOH . H 5 HOH A 136 313 142 HOH HOH . H 5 HOH A 137 314 143 HOH HOH . H 5 HOH A 138 315 144 HOH HOH . H 5 HOH A 139 316 145 HOH HOH . H 5 HOH A 140 317 146 HOH HOH . H 5 HOH A 141 318 147 HOH HOH . H 5 HOH A 142 319 148 HOH HOH . H 5 HOH A 143 320 149 HOH HOH . H 5 HOH A 144 321 150 HOH HOH . H 5 HOH A 145 322 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 3 3.804 5.04 -63.373 1 39.45 ? C1 EDO 173 A 1 HETATM 2 O O1 EDO . . . C 3 2.997 3.908 -63.015 1 39.21 ? O1 EDO 173 A 1 HETATM 3 C C2 EDO . . . C 3 5.285 4.724 -63.291 1 40.13 ? C2 EDO 173 A 1 HETATM 4 O O2 EDO . . . C 3 5.591 3.777 -64.311 1 46.24 ? O2 EDO 173 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #