data_3CUK # _model_server_result.job_id 0M7CmVtPG8Y31ngggse-NQ _model_server_result.datetime_utc '2024-11-27 15:03:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cuk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 3CUK # _exptl.entry_id 3CUK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.45 _cell.angle_gamma 90 _cell.entry_id 3CUK _cell.length_a 187.729 _cell.length_b 51.145 _cell.length_c 153.294 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CUK _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,I,J,M,O 1 1 B,D,G,H,K,L,N,P 2 1 A,E,F,M 3 1 C,I,J,O 3 2 B,G,H,N 4 1 D,K,L,P 4 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -53.559367 0 143.633021 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 100 n n PA O2A FAD sing 101 n n PA O5B FAD sing 102 n n PA O3P FAD sing 103 n n O2A HOA2 FAD sing 104 n n O5B C5B FAD sing 105 n n C5B C4B FAD sing 106 n n C5B H51A FAD sing 107 n n C5B H52A FAD sing 108 n n C4B O4B FAD sing 109 n n C4B C3B FAD sing 110 n n C4B H4B FAD sing 111 n n O4B C1B FAD sing 112 n n C3B O3B FAD sing 113 n n C3B C2B FAD sing 114 n n C3B H3B FAD sing 115 n n O3B HO3A FAD sing 116 n n C2B O2B FAD sing 117 n n C2B C1B FAD sing 118 n n C2B H2B FAD sing 119 n n O2B HO2A FAD sing 120 n n C1B N9A FAD sing 121 n n C1B H1B FAD sing 122 n n N9A C8A FAD sing 123 n y N9A C4A FAD sing 124 n y C8A N7A FAD doub 125 n y C8A H8A FAD sing 126 n n N7A C5A FAD sing 127 n y C5A C6A FAD sing 128 n y C5A C4A FAD doub 129 n y C6A N6A FAD sing 130 n n C6A N1A FAD doub 131 n y N6A H61A FAD sing 132 n n N6A H62A FAD sing 133 n n N1A C2A FAD sing 134 n y C2A N3A FAD doub 135 n y C2A H2A FAD sing 136 n n N3A C4A FAD sing 137 n y N1 C2 FAD sing 138 n n N1 C10 FAD doub 139 n n C2 O2 FAD doub 140 n n C2 N3 FAD sing 141 n n N3 C4 FAD sing 142 n n N3 HN3 FAD sing 143 n n C4 O4 FAD doub 144 n n C4 C4X FAD sing 145 n n C4X N5 FAD doub 146 n n C4X C10 FAD sing 147 n n N5 C5X FAD sing 148 n n C5X C6 FAD doub 149 n y C5X C9A FAD sing 150 n y C6 C7 FAD sing 151 n y C6 H6 FAD sing 152 n n C7 C7M FAD sing 153 n n C7 C8 FAD doub 154 n y C7M HM71 FAD sing 155 n n C7M HM72 FAD sing 156 n n C7M HM73 FAD sing 157 n n C8 C8M FAD sing 158 n n C8 C9 FAD sing 159 n y C8M HM81 FAD sing 160 n n C8M HM82 FAD sing 161 n n C8M HM83 FAD sing 162 n n C9 C9A FAD doub 163 n y C9 H9 FAD sing 164 n n C9A N10 FAD sing 165 n n N10 C10 FAD sing 166 n n N10 C1' FAD sing 167 n n C1' C2' FAD sing 168 n n C1' "H1'1" FAD sing 169 n n C1' "H1'2" FAD sing 170 n n C2' O2' FAD sing 171 n n C2' C3' FAD sing 172 n n C2' H2' FAD sing 173 n n O2' HO2' FAD sing 174 n n C3' O3' FAD sing 175 n n C3' C4' FAD sing 176 n n C3' H3' FAD sing 177 n n O3' HO3' FAD sing 178 n n C4' O4' FAD sing 179 n n C4' C5' FAD sing 180 n n C4' H4' FAD sing 181 n n O4' HO4' FAD sing 182 n n C5' O5' FAD sing 183 n n C5' "H5'1" FAD sing 184 n n C5' "H5'2" FAD sing 185 n n O5' P FAD sing 186 n n P O1P FAD doub 187 n n P O2P FAD sing 188 n n P O3P FAD sing 189 n n O2P HOP2 FAD sing 190 n n # _atom_sites.entry_id 3CUK _atom_sites.fract_transf_matrix[1][1] 0.005327 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001986 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 401 401 FAD FAD . F 3 4P5 A 1 402 402 4P5 4P5 . G 2 FAD B 1 401 401 FAD FAD . H 3 4P5 B 1 402 402 4P5 4P5 . I 2 FAD C 1 401 401 FAD FAD . J 3 4P5 C 1 402 402 4P5 4P5 . K 2 FAD D 1 401 401 FAD FAD . L 3 4P5 D 1 402 402 4P5 4P5 . M 4 HOH A 1 1005 1005 HOH HOH . M 4 HOH A 2 1011 1011 HOH HOH . M 4 HOH A 3 1012 1012 HOH HOH . M 4 HOH A 4 1022 1022 HOH HOH . M 4 HOH A 5 1027 1027 HOH HOH . M 4 HOH A 6 1029 1029 HOH HOH . M 4 HOH A 7 1030 1030 HOH HOH . M 4 HOH A 8 1031 1031 HOH HOH . M 4 HOH A 9 1036 1036 HOH HOH . M 4 HOH A 10 1040 1040 HOH HOH . M 4 HOH A 11 1044 1044 HOH HOH . M 4 HOH A 12 1049 1049 HOH HOH . M 4 HOH A 13 1050 1050 HOH HOH . N 4 HOH B 1 1001 1001 HOH HOH . N 4 HOH B 2 1004 1004 HOH HOH . N 4 HOH B 3 1006 1006 HOH HOH . N 4 HOH B 4 1013 1013 HOH HOH . N 4 HOH B 5 1017 1017 HOH HOH . N 4 HOH B 6 1018 1018 HOH HOH . N 4 HOH B 7 1023 1023 HOH HOH . N 4 HOH B 8 1028 1028 HOH HOH . N 4 HOH B 9 1033 1033 HOH HOH . N 4 HOH B 10 1035 1035 HOH HOH . N 4 HOH B 11 1038 1038 HOH HOH . N 4 HOH B 12 1039 1039 HOH HOH . N 4 HOH B 13 1041 1041 HOH HOH . O 4 HOH C 1 1003 1003 HOH HOH . O 4 HOH C 2 1008 1008 HOH HOH . O 4 HOH C 3 1009 1009 HOH HOH . O 4 HOH C 4 1015 1015 HOH HOH . O 4 HOH C 5 1034 1034 HOH HOH . O 4 HOH C 6 1043 1043 HOH HOH . O 4 HOH C 7 1045 1045 HOH HOH . P 4 HOH D 1 1007 1007 HOH HOH . P 4 HOH D 2 1016 1016 HOH HOH . P 4 HOH D 3 1020 1020 HOH HOH . P 4 HOH D 4 1024 1024 HOH HOH . P 4 HOH D 5 1032 1032 HOH HOH . P 4 HOH D 6 1042 1042 HOH HOH . P 4 HOH D 7 1046 1046 HOH HOH . P 4 HOH D 8 1047 1047 HOH HOH . P 4 HOH D 9 1048 1048 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . I 2 -23.547 -16.894 -16.561 1 15.52 ? PA FAD 401 C 1 HETATM 2 O O1A FAD . . . I 2 -24.24 -18.15 -16.311 1 12.8 ? O1A FAD 401 C 1 HETATM 3 O O2A FAD . . . I 2 -22.19 -17.079 -15.937 1 14.01 ? O2A FAD 401 C 1 HETATM 4 O O5B FAD . . . I 2 -24.444 -15.726 -15.951 1 16.7 ? O5B FAD 401 C 1 HETATM 5 C C5B FAD . . . I 2 -25.837 -15.87 -16.193 1 15.13 ? C5B FAD 401 C 1 HETATM 6 C C4B FAD . . . I 2 -26.458 -14.987 -15.134 1 21.12 ? C4B FAD 401 C 1 HETATM 7 O O4B FAD . . . I 2 -27.836 -14.698 -15.329 1 23.11 ? O4B FAD 401 C 1 HETATM 8 C C3B FAD . . . I 2 -26.367 -15.595 -13.752 1 23.32 ? C3B FAD 401 C 1 HETATM 9 O O3B FAD . . . I 2 -26.028 -14.533 -12.865 1 27.14 ? O3B FAD 401 C 1 HETATM 10 C C2B FAD . . . I 2 -27.792 -16.08 -13.447 1 24.31 ? C2B FAD 401 C 1 HETATM 11 O O2B FAD . . . I 2 -27.997 -16.181 -12.036 1 24 ? O2B FAD 401 C 1 HETATM 12 C C1B FAD . . . I 2 -28.576 -14.971 -14.131 1 21.14 ? C1B FAD 401 C 1 HETATM 13 N N9A FAD . . . I 2 -29.946 -15.242 -14.536 1 23.31 ? N9A FAD 401 C 1 HETATM 14 C C8A FAD . . . I 2 -30.369 -16.125 -15.546 1 23.88 ? C8A FAD 401 C 1 HETATM 15 N N7A FAD . . . I 2 -31.742 -15.989 -15.64 1 22.66 ? N7A FAD 401 C 1 HETATM 16 C C5A FAD . . . I 2 -32.199 -15.031 -14.728 1 20.4 ? C5A FAD 401 C 1 HETATM 17 C C6A FAD . . . I 2 -33.481 -14.5 -14.373 1 20.74 ? C6A FAD 401 C 1 HETATM 18 N N6A FAD . . . I 2 -34.66 -14.942 -14.916 1 16.01 ? N6A FAD 401 C 1 HETATM 19 N N1A FAD . . . I 2 -33.57 -13.499 -13.415 1 20.9 ? N1A FAD 401 C 1 HETATM 20 C C2A FAD . . . I 2 -32.44 -13.057 -12.791 1 20.62 ? C2A FAD 401 C 1 HETATM 21 N N3A FAD . . . I 2 -31.207 -13.575 -13.13 1 21.38 ? N3A FAD 401 C 1 HETATM 22 C C4A FAD . . . I 2 -31.064 -14.538 -14.075 1 22.33 ? C4A FAD 401 C 1 HETATM 23 N N1 FAD . . . I 2 -14.844 -19.997 -21.555 1 24.83 ? N1 FAD 401 C 1 HETATM 24 C C2 FAD . . . I 2 -13.655 -19.462 -22.006 1 24.14 ? C2 FAD 401 C 1 HETATM 25 O O2 FAD . . . I 2 -13.627 -18.465 -22.748 1 23.47 ? O2 FAD 401 C 1 HETATM 26 N N3 FAD . . . I 2 -12.517 -20.032 -21.576 1 24.52 ? N3 FAD 401 C 1 HETATM 27 C C4 FAD . . . I 2 -12.559 -21.126 -20.767 1 23.75 ? C4 FAD 401 C 1 HETATM 28 O O4 FAD . . . I 2 -11.447 -21.575 -20.473 1 22.64 ? O4 FAD 401 C 1 HETATM 29 C C4X FAD . . . I 2 -13.784 -21.658 -20.343 1 22.9 ? C4X FAD 401 C 1 HETATM 30 N N5 FAD . . . I 2 -13.893 -22.761 -19.533 1 22.94 ? N5 FAD 401 C 1 HETATM 31 C C5X FAD . . . I 2 -15.085 -23.248 -19.143 1 22.22 ? C5X FAD 401 C 1 HETATM 32 C C6 FAD . . . I 2 -15.108 -24.393 -18.366 1 23.25 ? C6 FAD 401 C 1 HETATM 33 C C7 FAD . . . I 2 -16.274 -25.003 -17.905 1 23.15 ? C7 FAD 401 C 1 HETATM 34 C C7M FAD . . . I 2 -16.171 -26.224 -17.012 1 22.76 ? C7M FAD 401 C 1 HETATM 35 C C8 FAD . . . I 2 -17.496 -24.396 -18.287 1 24.64 ? C8 FAD 401 C 1 HETATM 36 C C8M FAD . . . I 2 -18.861 -24.959 -17.88 1 23.37 ? C8M FAD 401 C 1 HETATM 37 C C9 FAD . . . I 2 -17.449 -23.228 -19.124 1 24.82 ? C9 FAD 401 C 1 HETATM 38 C C9A FAD . . . I 2 -16.244 -22.65 -19.548 1 23.01 ? C9A FAD 401 C 1 HETATM 39 N N10 FAD . . . I 2 -16.181 -21.562 -20.396 1 24.11 ? N10 FAD 401 C 1 HETATM 40 C C10 FAD . . . I 2 -14.934 -21.085 -20.759 1 23.28 ? C10 FAD 401 C 1 HETATM 41 C C1' FAD . . . I 2 -17.417 -20.889 -20.947 1 22.76 ? C1' FAD 401 C 1 HETATM 42 C C2' FAD . . . I 2 -17.897 -19.764 -20.041 1 21.73 ? C2' FAD 401 C 1 HETATM 43 O O2' FAD . . . I 2 -17.957 -20.288 -18.744 1 18.61 ? O2' FAD 401 C 1 HETATM 44 C C3' FAD . . . I 2 -19.282 -19.254 -20.519 1 24.38 ? C3' FAD 401 C 1 HETATM 45 O O3' FAD . . . I 2 -19.306 -19.033 -21.952 1 29.66 ? O3' FAD 401 C 1 HETATM 46 C C4' FAD . . . I 2 -19.648 -17.942 -19.82 1 21.58 ? C4' FAD 401 C 1 HETATM 47 O O4' FAD . . . I 2 -19.407 -18.169 -18.469 1 21.3 ? O4' FAD 401 C 1 HETATM 48 C C5' FAD . . . I 2 -21.099 -17.472 -19.953 1 15.76 ? C5' FAD 401 C 1 HETATM 49 O O5' FAD . . . I 2 -21.259 -16.247 -19.218 1 14.92 ? O5' FAD 401 C 1 HETATM 50 P P FAD . . . I 2 -22.774 -15.665 -19.031 1 12.21 ? P FAD 401 C 1 HETATM 51 O O1P FAD . . . I 2 -22.833 -14.229 -18.591 1 12.52 ? O1P FAD 401 C 1 HETATM 52 O O2P FAD . . . I 2 -23.37 -16.078 -20.299 1 19.99 ? O2P FAD 401 C 1 HETATM 53 O O3P FAD . . . I 2 -23.696 -16.653 -18.165 1 14.6 ? O3P FAD 401 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #