data_3CVC # _model_server_result.job_id zdCJ13v8DltRnzl3tFvD5g _model_server_result.datetime_utc '2024-11-15 22:27:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cvc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":106}' # _entry.id 3CVC # _exptl.entry_id 3CVC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CVC _cell.length_a 23.985 _cell.length_b 55.52 _cell.length_c 64.992 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CVC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 39 A HIS 39 1_555 B CU CU . A CU 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc2 A SG CYS 89 A CYS 89 1_555 B CU CU . A CU 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc3 A ND1 HIS 92 A HIS 92 1_555 B CU CU . A CU 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc4 C MG MG . A MG 107 1_555 D O HOH . A HOH 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc5 C MG MG . A MG 107 1_555 D O HOH . A HOH 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc6 C MG MG . A MG 107 1_555 D O HOH . A HOH 248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc7 C MG MG . A MG 107 1_555 D O HOH . A HOH 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc8 C MG MG . A MG 107 1_555 D O HOH . A HOH 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc9 C MG MG . A MG 107 1_555 D O HOH . A HOH 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CVC _atom_sites.fract_transf_matrix[1][1] 0.041693 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018012 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015387 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 106 106 CU CU . C 3 MG A 1 107 107 MG MG . D 4 HOH A 1 108 108 HOH HOH . D 4 HOH A 2 109 109 HOH HOH . D 4 HOH A 3 110 110 HOH HOH . D 4 HOH A 4 111 111 HOH HOH . D 4 HOH A 5 112 112 HOH HOH . D 4 HOH A 6 113 113 HOH HOH . D 4 HOH A 7 114 114 HOH HOH . D 4 HOH A 8 115 115 HOH HOH . D 4 HOH A 9 116 116 HOH HOH . D 4 HOH A 10 117 117 HOH HOH . D 4 HOH A 11 118 118 HOH HOH . D 4 HOH A 12 119 119 HOH HOH . D 4 HOH A 13 120 120 HOH HOH . D 4 HOH A 14 121 121 HOH HOH . D 4 HOH A 15 122 122 HOH HOH . D 4 HOH A 16 123 123 HOH HOH . D 4 HOH A 17 124 124 HOH HOH . D 4 HOH A 18 125 125 HOH HOH . D 4 HOH A 19 126 126 HOH HOH . D 4 HOH A 20 127 127 HOH HOH . D 4 HOH A 21 128 128 HOH HOH . D 4 HOH A 22 129 129 HOH HOH . D 4 HOH A 23 130 130 HOH HOH . D 4 HOH A 24 131 131 HOH HOH . D 4 HOH A 25 132 132 HOH HOH . D 4 HOH A 26 133 133 HOH HOH . D 4 HOH A 27 134 134 HOH HOH . D 4 HOH A 28 135 135 HOH HOH . D 4 HOH A 29 136 136 HOH HOH . D 4 HOH A 30 137 137 HOH HOH . D 4 HOH A 31 138 138 HOH HOH . D 4 HOH A 32 139 139 HOH HOH . D 4 HOH A 33 140 140 HOH HOH . D 4 HOH A 34 141 141 HOH HOH . D 4 HOH A 35 142 142 HOH HOH . D 4 HOH A 36 143 143 HOH HOH . D 4 HOH A 37 144 144 HOH HOH . D 4 HOH A 38 145 145 HOH HOH . D 4 HOH A 39 146 146 HOH HOH . D 4 HOH A 40 147 147 HOH HOH . D 4 HOH A 41 148 148 HOH HOH . D 4 HOH A 42 149 149 HOH HOH . D 4 HOH A 43 150 150 HOH HOH . D 4 HOH A 44 151 151 HOH HOH . D 4 HOH A 45 152 152 HOH HOH . D 4 HOH A 46 153 153 HOH HOH . D 4 HOH A 47 154 154 HOH HOH . D 4 HOH A 48 155 155 HOH HOH . D 4 HOH A 49 156 156 HOH HOH . D 4 HOH A 50 157 157 HOH HOH . D 4 HOH A 51 158 158 HOH HOH . D 4 HOH A 52 159 159 HOH HOH . D 4 HOH A 53 160 160 HOH HOH . D 4 HOH A 54 161 161 HOH HOH . D 4 HOH A 55 162 162 HOH HOH . D 4 HOH A 56 163 163 HOH HOH . D 4 HOH A 57 164 164 HOH HOH . D 4 HOH A 58 165 165 HOH HOH . D 4 HOH A 59 166 166 HOH HOH . D 4 HOH A 60 167 167 HOH HOH . D 4 HOH A 61 168 168 HOH HOH . D 4 HOH A 62 169 169 HOH HOH . D 4 HOH A 63 170 170 HOH HOH . D 4 HOH A 64 171 171 HOH HOH . D 4 HOH A 65 172 172 HOH HOH . D 4 HOH A 66 173 173 HOH HOH . D 4 HOH A 67 174 174 HOH HOH . D 4 HOH A 68 175 175 HOH HOH . D 4 HOH A 69 176 176 HOH HOH . D 4 HOH A 70 177 177 HOH HOH . D 4 HOH A 71 178 178 HOH HOH . D 4 HOH A 72 179 179 HOH HOH . D 4 HOH A 73 180 180 HOH HOH . D 4 HOH A 74 181 181 HOH HOH . D 4 HOH A 75 182 182 HOH HOH . D 4 HOH A 76 183 183 HOH HOH . D 4 HOH A 77 184 184 HOH HOH . D 4 HOH A 78 185 185 HOH HOH . D 4 HOH A 79 186 186 HOH HOH . D 4 HOH A 80 187 187 HOH HOH . D 4 HOH A 81 188 188 HOH HOH . D 4 HOH A 82 189 189 HOH HOH . D 4 HOH A 83 190 190 HOH HOH . D 4 HOH A 84 191 191 HOH HOH . D 4 HOH A 85 192 192 HOH HOH . D 4 HOH A 86 193 193 HOH HOH . D 4 HOH A 87 194 194 HOH HOH . D 4 HOH A 88 195 195 HOH HOH . D 4 HOH A 89 196 196 HOH HOH . D 4 HOH A 90 197 197 HOH HOH . D 4 HOH A 91 198 198 HOH HOH . D 4 HOH A 92 199 199 HOH HOH . D 4 HOH A 93 200 200 HOH HOH . D 4 HOH A 94 201 201 HOH HOH . D 4 HOH A 95 202 202 HOH HOH . D 4 HOH A 96 203 203 HOH HOH . D 4 HOH A 97 204 204 HOH HOH . D 4 HOH A 98 205 205 HOH HOH . D 4 HOH A 99 206 206 HOH HOH . D 4 HOH A 100 207 207 HOH HOH . D 4 HOH A 101 208 208 HOH HOH . D 4 HOH A 102 209 209 HOH HOH . D 4 HOH A 103 210 210 HOH HOH . D 4 HOH A 104 211 211 HOH HOH . D 4 HOH A 105 212 212 HOH HOH . D 4 HOH A 106 213 213 HOH HOH . D 4 HOH A 107 214 214 HOH HOH . D 4 HOH A 108 215 215 HOH HOH . D 4 HOH A 109 216 216 HOH HOH . D 4 HOH A 110 217 217 HOH HOH . D 4 HOH A 111 218 218 HOH HOH . D 4 HOH A 112 219 219 HOH HOH . D 4 HOH A 113 220 220 HOH HOH . D 4 HOH A 114 221 221 HOH HOH . D 4 HOH A 115 222 222 HOH HOH . D 4 HOH A 116 223 223 HOH HOH . D 4 HOH A 117 224 224 HOH HOH . D 4 HOH A 118 225 225 HOH HOH . D 4 HOH A 119 226 226 HOH HOH . D 4 HOH A 120 227 227 HOH HOH . D 4 HOH A 121 228 228 HOH HOH . D 4 HOH A 122 229 229 HOH HOH . D 4 HOH A 123 230 230 HOH HOH . D 4 HOH A 124 231 231 HOH HOH . D 4 HOH A 125 232 232 HOH HOH . D 4 HOH A 126 233 233 HOH HOH . D 4 HOH A 127 234 234 HOH HOH . D 4 HOH A 128 235 235 HOH HOH . D 4 HOH A 129 236 236 HOH HOH . D 4 HOH A 130 237 237 HOH HOH . D 4 HOH A 131 238 238 HOH HOH . D 4 HOH A 132 239 239 HOH HOH . D 4 HOH A 133 240 240 HOH HOH . D 4 HOH A 134 241 241 HOH HOH . D 4 HOH A 135 242 242 HOH HOH . D 4 HOH A 136 243 243 HOH HOH . D 4 HOH A 137 244 244 HOH HOH . D 4 HOH A 138 245 245 HOH HOH . D 4 HOH A 139 246 246 HOH HOH . D 4 HOH A 140 247 247 HOH HOH . D 4 HOH A 141 248 248 HOH HOH . D 4 HOH A 142 249 249 HOH HOH . D 4 HOH A 143 250 250 HOH HOH . D 4 HOH A 144 251 251 HOH HOH . D 4 HOH A 145 252 252 HOH HOH . D 4 HOH A 146 253 253 HOH HOH . D 4 HOH A 147 254 254 HOH HOH . D 4 HOH A 148 255 255 HOH HOH . D 4 HOH A 149 256 256 HOH HOH . D 4 HOH A 150 257 257 HOH HOH . D 4 HOH A 151 258 258 HOH HOH . D 4 HOH A 152 259 259 HOH HOH . D 4 HOH A 153 260 260 HOH HOH . D 4 HOH A 154 261 261 HOH HOH . D 4 HOH A 155 262 262 HOH HOH . D 4 HOH A 156 263 263 HOH HOH . D 4 HOH A 157 264 264 HOH HOH . D 4 HOH A 158 265 265 HOH HOH . D 4 HOH A 159 266 266 HOH HOH . D 4 HOH A 160 267 267 HOH HOH . D 4 HOH A 161 268 268 HOH HOH . D 4 HOH A 162 269 269 HOH HOH . D 4 HOH A 163 270 270 HOH HOH . D 4 HOH A 164 271 271 HOH HOH . D 4 HOH A 165 272 272 HOH HOH . D 4 HOH A 166 273 273 HOH HOH . D 4 HOH A 167 274 274 HOH HOH . D 4 HOH A 168 275 275 HOH HOH . D 4 HOH A 169 276 276 HOH HOH . D 4 HOH A 170 277 277 HOH HOH . D 4 HOH A 171 278 278 HOH HOH . D 4 HOH A 172 279 279 HOH HOH . D 4 HOH A 173 280 280 HOH HOH . D 4 HOH A 174 281 281 HOH HOH . D 4 HOH A 175 282 282 HOH HOH . D 4 HOH A 176 283 283 HOH HOH . D 4 HOH A 177 284 284 HOH HOH . D 4 HOH A 178 285 285 HOH HOH . D 4 HOH A 179 286 286 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.021 _atom_site.Cartn_y 0.909 _atom_site.Cartn_z 22.678 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 106 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 72 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #