data_3CWC # _model_server_result.job_id Vay1eiIycSjdNL0-Q0C2hw _model_server_result.datetime_utc '2025-04-11 05:41:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3cwc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 3CWC # _exptl.entry_id 3CWC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.01 _cell.angle_gamma 90 _cell.entry_id 3CWC _cell.length_a 63.733 _cell.length_b 59.549 _cell.length_c 103.605 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CWC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ALA 54 A ALA 51 1_555 A N MSE 55 A MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 A C MSE 55 A MSE 52 1_555 A N VAL 56 A VAL 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C GLU 92 A GLU 89 1_555 A N MSE 93 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale6 A C MSE 93 A MSE 90 1_555 A N ALA 94 A ALA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale7 A C GLY 147 A GLY 144 1_555 A N MSE 148 A MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C MSE 148 A MSE 145 1_555 A N VAL 149 A VAL 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale9 A C GLU 220 A GLU 217 1_555 A N MSE 221 A MSE 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C MSE 221 A MSE 218 1_555 A N ILE 222 A ILE 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 A C GLY 255 A GLY 252 1_555 A N MSE 256 A MSE 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale12 A C MSE 256 A MSE 253 1_555 A N GLY 257 A GLY 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale13 A C ARG 366 A ARG 363 1_555 A N MSE 367 A MSE 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale14 A C MSE 367 A MSE 364 1_555 A N THR 368 A THR 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale15 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale16 B C MSE 4 B MSE 1 1_555 B N LYS 5 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale17 B C ALA 54 B ALA 51 1_555 B N MSE 55 B MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale18 B C MSE 55 B MSE 52 1_555 B N VAL 56 B VAL 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 B C GLU 92 B GLU 89 1_555 B N MSE 93 B MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale20 B C MSE 93 B MSE 90 1_555 B N ALA 94 B ALA 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale21 B C GLY 147 B GLY 144 1_555 B N MSE 148 B MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale22 B C MSE 148 B MSE 145 1_555 B N VAL 149 B VAL 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale23 B C GLU 220 B GLU 217 1_555 B N MSE 221 B MSE 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale24 B C MSE 221 B MSE 218 1_555 B N ILE 222 B ILE 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale25 B C GLY 255 B GLY 252 1_555 B N MSE 256 B MSE 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale26 B C MSE 256 B MSE 253 1_555 B N GLY 257 B GLY 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale27 B C ARG 366 B ARG 363 1_555 B N MSE 367 B MSE 364 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale28 B C MSE 367 B MSE 364 1_555 B N THR 368 B THR 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3CWC _atom_sites.fract_transf_matrix[1][1] 0.01569 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004502 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016793 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010042 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 402 402 EDO EDO . D 3 CL B 1 403 403 CL CL . E 2 EDO B 1 401 401 EDO EDO . F 4 HOH A 1 403 2 HOH HOH . F 4 HOH A 2 404 3 HOH HOH . F 4 HOH A 3 405 6 HOH HOH . F 4 HOH A 4 406 7 HOH HOH . F 4 HOH A 5 407 8 HOH HOH . F 4 HOH A 6 408 9 HOH HOH . F 4 HOH A 7 409 13 HOH HOH . F 4 HOH A 8 410 15 HOH HOH . F 4 HOH A 9 411 17 HOH HOH . F 4 HOH A 10 412 18 HOH HOH . F 4 HOH A 11 413 20 HOH HOH . F 4 HOH A 12 414 21 HOH HOH . F 4 HOH A 13 415 22 HOH HOH . F 4 HOH A 14 416 24 HOH HOH . F 4 HOH A 15 417 25 HOH HOH . F 4 HOH A 16 418 26 HOH HOH . F 4 HOH A 17 419 27 HOH HOH . F 4 HOH A 18 420 28 HOH HOH . F 4 HOH A 19 421 29 HOH HOH . F 4 HOH A 20 422 37 HOH HOH . F 4 HOH A 21 423 38 HOH HOH . F 4 HOH A 22 424 43 HOH HOH . F 4 HOH A 23 425 44 HOH HOH . F 4 HOH A 24 426 45 HOH HOH . F 4 HOH A 25 427 47 HOH HOH . F 4 HOH A 26 428 48 HOH HOH . F 4 HOH A 27 429 49 HOH HOH . F 4 HOH A 28 430 51 HOH HOH . F 4 HOH A 29 431 55 HOH HOH . F 4 HOH A 30 432 59 HOH HOH . F 4 HOH A 31 433 60 HOH HOH . F 4 HOH A 32 434 61 HOH HOH . F 4 HOH A 33 435 69 HOH HOH . F 4 HOH A 34 437 74 HOH HOH . F 4 HOH A 35 438 76 HOH HOH . F 4 HOH A 36 439 78 HOH HOH . F 4 HOH A 37 440 79 HOH HOH . F 4 HOH A 38 441 81 HOH HOH . F 4 HOH A 39 442 82 HOH HOH . F 4 HOH A 40 443 83 HOH HOH . F 4 HOH A 41 444 85 HOH HOH . F 4 HOH A 42 445 86 HOH HOH . F 4 HOH A 43 446 88 HOH HOH . F 4 HOH A 44 447 89 HOH HOH . F 4 HOH A 45 448 95 HOH HOH . F 4 HOH A 46 449 100 HOH HOH . F 4 HOH A 47 450 102 HOH HOH . F 4 HOH A 48 451 103 HOH HOH . F 4 HOH A 49 452 104 HOH HOH . F 4 HOH A 50 453 106 HOH HOH . F 4 HOH A 51 454 108 HOH HOH . F 4 HOH A 52 455 111 HOH HOH . F 4 HOH A 53 456 114 HOH HOH . F 4 HOH A 54 457 115 HOH HOH . F 4 HOH A 55 458 116 HOH HOH . F 4 HOH A 56 459 118 HOH HOH . F 4 HOH A 57 460 119 HOH HOH . F 4 HOH A 58 461 123 HOH HOH . F 4 HOH A 59 462 124 HOH HOH . F 4 HOH A 60 463 126 HOH HOH . F 4 HOH A 61 464 127 HOH HOH . F 4 HOH A 62 465 130 HOH HOH . F 4 HOH A 63 466 132 HOH HOH . F 4 HOH A 64 467 133 HOH HOH . F 4 HOH A 65 468 134 HOH HOH . F 4 HOH A 66 469 135 HOH HOH . F 4 HOH A 67 470 136 HOH HOH . F 4 HOH A 68 471 140 HOH HOH . F 4 HOH A 69 472 150 HOH HOH . F 4 HOH A 70 473 153 HOH HOH . G 4 HOH B 1 436 72 HOH HOH . G 4 HOH B 2 437 1 HOH HOH . G 4 HOH B 3 438 4 HOH HOH . G 4 HOH B 4 439 5 HOH HOH . G 4 HOH B 5 440 10 HOH HOH . G 4 HOH B 6 441 11 HOH HOH . G 4 HOH B 7 442 12 HOH HOH . G 4 HOH B 8 443 14 HOH HOH . G 4 HOH B 9 444 16 HOH HOH . G 4 HOH B 10 445 19 HOH HOH . G 4 HOH B 11 446 23 HOH HOH . G 4 HOH B 12 447 30 HOH HOH . G 4 HOH B 13 448 31 HOH HOH . G 4 HOH B 14 449 32 HOH HOH . G 4 HOH B 15 450 33 HOH HOH . G 4 HOH B 16 451 34 HOH HOH . G 4 HOH B 17 452 35 HOH HOH . G 4 HOH B 18 453 36 HOH HOH . G 4 HOH B 19 454 39 HOH HOH . G 4 HOH B 20 455 40 HOH HOH . G 4 HOH B 21 456 41 HOH HOH . G 4 HOH B 22 457 42 HOH HOH . G 4 HOH B 23 458 46 HOH HOH . G 4 HOH B 24 459 50 HOH HOH . G 4 HOH B 25 460 52 HOH HOH . G 4 HOH B 26 461 53 HOH HOH . G 4 HOH B 27 462 54 HOH HOH . G 4 HOH B 28 463 56 HOH HOH . G 4 HOH B 29 464 57 HOH HOH . G 4 HOH B 30 465 58 HOH HOH . G 4 HOH B 31 466 62 HOH HOH . G 4 HOH B 32 467 63 HOH HOH . G 4 HOH B 33 468 64 HOH HOH . G 4 HOH B 34 469 65 HOH HOH . G 4 HOH B 35 470 66 HOH HOH . G 4 HOH B 36 471 67 HOH HOH . G 4 HOH B 37 472 68 HOH HOH . G 4 HOH B 38 473 70 HOH HOH . G 4 HOH B 39 474 71 HOH HOH . G 4 HOH B 40 475 73 HOH HOH . G 4 HOH B 41 476 75 HOH HOH . G 4 HOH B 42 477 77 HOH HOH . G 4 HOH B 43 478 80 HOH HOH . G 4 HOH B 44 479 84 HOH HOH . G 4 HOH B 45 480 87 HOH HOH . G 4 HOH B 46 481 90 HOH HOH . G 4 HOH B 47 482 91 HOH HOH . G 4 HOH B 48 483 92 HOH HOH . G 4 HOH B 49 484 93 HOH HOH . G 4 HOH B 50 485 94 HOH HOH . G 4 HOH B 51 486 96 HOH HOH . G 4 HOH B 52 487 97 HOH HOH . G 4 HOH B 53 488 98 HOH HOH . G 4 HOH B 54 489 99 HOH HOH . G 4 HOH B 55 490 101 HOH HOH . G 4 HOH B 56 491 105 HOH HOH . G 4 HOH B 57 492 107 HOH HOH . G 4 HOH B 58 493 109 HOH HOH . G 4 HOH B 59 494 110 HOH HOH . G 4 HOH B 60 495 112 HOH HOH . G 4 HOH B 61 496 113 HOH HOH . G 4 HOH B 62 497 117 HOH HOH . G 4 HOH B 63 498 120 HOH HOH . G 4 HOH B 64 499 121 HOH HOH . G 4 HOH B 65 500 122 HOH HOH . G 4 HOH B 66 501 125 HOH HOH . G 4 HOH B 67 502 128 HOH HOH . G 4 HOH B 68 503 129 HOH HOH . G 4 HOH B 69 504 131 HOH HOH . G 4 HOH B 70 505 137 HOH HOH . G 4 HOH B 71 506 138 HOH HOH . G 4 HOH B 72 507 139 HOH HOH . G 4 HOH B 73 508 141 HOH HOH . G 4 HOH B 74 509 142 HOH HOH . G 4 HOH B 75 510 143 HOH HOH . G 4 HOH B 76 511 144 HOH HOH . G 4 HOH B 77 512 145 HOH HOH . G 4 HOH B 78 513 146 HOH HOH . G 4 HOH B 79 514 147 HOH HOH . G 4 HOH B 80 515 148 HOH HOH . G 4 HOH B 81 516 149 HOH HOH . G 4 HOH B 82 517 151 HOH HOH . G 4 HOH B 83 518 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 30.651 33 17.345 1 66.19 ? C1 EDO 402 A 1 HETATM 2 O O1 EDO . . . C 2 29.332 32.533 17.674 1 65.71 ? O1 EDO 402 A 1 HETATM 3 C C2 EDO . . . C 2 30.758 32.934 15.823 1 66.58 ? C2 EDO 402 A 1 HETATM 4 O O2 EDO . . . C 2 29.429 32.802 15.271 1 66.94 ? O2 EDO 402 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #