data_3CZD # _model_server_result.job_id gxR-u-KNt9Wn0oTw8GvSxQ _model_server_result.datetime_utc '2024-10-19 11:25:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3czd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 3CZD # _exptl.entry_id 3CZD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTAMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CZD _cell.length_a 139.52 _cell.length_b 139.52 _cell.length_c 153.95 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CZD _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GLU _chem_comp.mon_nstd_flag y _chem_comp.name 'GLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLU sing 102 n n N H GLU sing 103 n n N H2 GLU sing 104 n n CA C GLU sing 105 n n CA CB GLU sing 106 n n CA HA GLU sing 107 n n C O GLU doub 108 n n C OXT GLU sing 109 n n CB CG GLU sing 110 n n CB HB2 GLU sing 111 n n CB HB3 GLU sing 112 n n CG CD GLU sing 113 n n CG HG2 GLU sing 114 n n CG HG3 GLU sing 115 n n CD OE1 GLU doub 116 n n CD OE2 GLU sing 117 n n OE2 HE2 GLU sing 118 n n OXT HXT GLU sing 119 n n # _atom_sites.entry_id 3CZD _atom_sites.fract_transf_matrix[1][1] 0.007167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007167 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 700 700 SO4 SO4 . C 3 GLU A 1 600 600 GLU GLU . D 4 GOL A 1 701 900 GOL GOL . E 4 GOL A 1 702 901 GOL GOL . F 5 HOH A 1 801 1 HOH HOH . F 5 HOH A 2 802 2 HOH HOH . F 5 HOH A 3 803 3 HOH HOH . F 5 HOH A 4 804 4 HOH HOH . F 5 HOH A 5 805 5 HOH HOH . F 5 HOH A 6 806 6 HOH HOH . F 5 HOH A 7 807 7 HOH HOH . F 5 HOH A 8 808 8 HOH HOH . F 5 HOH A 9 809 9 HOH HOH . F 5 HOH A 10 810 10 HOH HOH . F 5 HOH A 11 811 11 HOH HOH . F 5 HOH A 12 812 12 HOH HOH . F 5 HOH A 13 813 13 HOH HOH . F 5 HOH A 14 814 14 HOH HOH . F 5 HOH A 15 815 15 HOH HOH . F 5 HOH A 16 816 16 HOH HOH . F 5 HOH A 17 817 17 HOH HOH . F 5 HOH A 18 818 18 HOH HOH . F 5 HOH A 19 819 19 HOH HOH . F 5 HOH A 20 820 20 HOH HOH . F 5 HOH A 21 821 21 HOH HOH . F 5 HOH A 22 822 22 HOH HOH . F 5 HOH A 23 823 23 HOH HOH . F 5 HOH A 24 824 24 HOH HOH . F 5 HOH A 25 825 25 HOH HOH . F 5 HOH A 26 826 26 HOH HOH . F 5 HOH A 27 827 27 HOH HOH . F 5 HOH A 28 828 28 HOH HOH . F 5 HOH A 29 829 29 HOH HOH . F 5 HOH A 30 830 30 HOH HOH . F 5 HOH A 31 831 31 HOH HOH . F 5 HOH A 32 832 32 HOH HOH . F 5 HOH A 33 833 33 HOH HOH . F 5 HOH A 34 834 34 HOH HOH . F 5 HOH A 35 835 35 HOH HOH . F 5 HOH A 36 836 36 HOH HOH . F 5 HOH A 37 837 37 HOH HOH . F 5 HOH A 38 838 38 HOH HOH . F 5 HOH A 39 839 39 HOH HOH . F 5 HOH A 40 840 40 HOH HOH . F 5 HOH A 41 841 41 HOH HOH . F 5 HOH A 42 842 42 HOH HOH . F 5 HOH A 43 843 43 HOH HOH . F 5 HOH A 44 844 44 HOH HOH . F 5 HOH A 45 845 45 HOH HOH . F 5 HOH A 46 846 46 HOH HOH . F 5 HOH A 47 847 47 HOH HOH . F 5 HOH A 48 848 48 HOH HOH . F 5 HOH A 49 849 49 HOH HOH . F 5 HOH A 50 850 50 HOH HOH . F 5 HOH A 51 851 51 HOH HOH . F 5 HOH A 52 852 52 HOH HOH . F 5 HOH A 53 853 53 HOH HOH . F 5 HOH A 54 854 54 HOH HOH . F 5 HOH A 55 855 55 HOH HOH . F 5 HOH A 56 856 56 HOH HOH . F 5 HOH A 57 857 57 HOH HOH . F 5 HOH A 58 858 58 HOH HOH . F 5 HOH A 59 859 59 HOH HOH . F 5 HOH A 60 860 60 HOH HOH . F 5 HOH A 61 861 61 HOH HOH . F 5 HOH A 62 862 62 HOH HOH . F 5 HOH A 63 863 63 HOH HOH . F 5 HOH A 64 864 64 HOH HOH . F 5 HOH A 65 865 65 HOH HOH . F 5 HOH A 66 866 66 HOH HOH . F 5 HOH A 67 867 67 HOH HOH . F 5 HOH A 68 868 68 HOH HOH . F 5 HOH A 69 869 69 HOH HOH . F 5 HOH A 70 870 70 HOH HOH . F 5 HOH A 71 871 71 HOH HOH . F 5 HOH A 72 872 72 HOH HOH . F 5 HOH A 73 873 73 HOH HOH . F 5 HOH A 74 874 74 HOH HOH . F 5 HOH A 75 875 75 HOH HOH . F 5 HOH A 76 876 76 HOH HOH . F 5 HOH A 77 877 77 HOH HOH . F 5 HOH A 78 878 78 HOH HOH . F 5 HOH A 79 879 79 HOH HOH . F 5 HOH A 80 880 80 HOH HOH . F 5 HOH A 81 881 81 HOH HOH . F 5 HOH A 82 882 82 HOH HOH . F 5 HOH A 83 883 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLU . . . C 3 20.828 -8.723 -13.254 1 48 ? N GLU 600 A 1 HETATM 2 C CA GLU . . . C 3 20.027 -7.539 -12.886 1 48.72 ? CA GLU 600 A 1 HETATM 3 C C GLU . . . C 3 18.957 -8.019 -11.878 1 49.39 ? C GLU 600 A 1 HETATM 4 O O GLU . . . C 3 18.527 -7.186 -11.039 1 49.89 ? O GLU 600 A 1 HETATM 5 C CB GLU . . . C 3 19.273 -7.036 -14.155 1 48.17 ? CB GLU 600 A 1 HETATM 6 C CG GLU . . . C 3 19.097 -5.566 -14.036 1 46.04 ? CG GLU 600 A 1 HETATM 7 C CD GLU . . . C 3 18.495 -4.895 -15.249 1 45.14 ? CD GLU 600 A 1 HETATM 8 O OE1 GLU . . . C 3 17.594 -4.081 -14.97 1 44.54 ? OE1 GLU 600 A 1 HETATM 9 O OE2 GLU . . . C 3 18.965 -5.13 -16.407 1 43.6 ? OE2 GLU 600 A 1 HETATM 10 O OXT GLU . . . C 3 18.573 -9.198 -12.013 1 49.41 ? OXT GLU 600 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #