data_3CZT # _model_server_result.job_id cq-gAXGAv-j8ni1AsOIFpw _model_server_result.datetime_utc '2024-11-26 10:56:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3czt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":94}' # _entry.id 3CZT # _exptl.entry_id 3CZT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3CZT _cell.length_a 34.98 _cell.length_b 89.26 _cell.length_c 59.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3CZT _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 59.58 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 19 X SER 18 1_555 B CA CA . X CA 92 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc2 A O SER 19 X SER 18 1_555 B CA CA . X CA 92 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc3 A O GLU 22 X GLU 21 1_555 B CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc4 A O ASP 24 X ASP 23 1_555 B CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc5 A O LYS 27 X LYS 26 1_555 B CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc6 A OE1 GLU 32 X GLU 31 1_555 B CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? metalc ? metalc7 A OE2 GLU 32 X GLU 31 1_555 B CA CA . X CA 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc8 A OD1 ASP 62 X ASP 61 1_555 C CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc9 A OD2 ASP 64 X ASP 63 1_555 C CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc10 A OD1 ASP 66 X ASP 65 1_555 C CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc11 A O GLU 68 X GLU 67 1_555 C CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc12 A OE1 GLU 73 X GLU 72 1_555 C CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc13 A OE2 GLU 73 X GLU 72 1_555 C CA CA . X CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc14 A NE2 HIS 86 X HIS 85 1_555 E ZN ZN . X ZN 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc15 A NE2 HIS 91 X HIS 90 1_555 E ZN ZN . X ZN 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? metalc ? metalc16 B CA CA . X CA 92 1_555 F O HOH . X HOH 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc17 C CA CA . X CA 93 1_555 F O HOH . X HOH 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc18 D CA CA . X CA 94 1_555 F O HOH . X HOH 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc19 D CA CA . X CA 94 1_555 F O HOH . X HOH 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3CZT _atom_sites.fract_transf_matrix[1][1] 0.028588 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016784 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA X 1 92 1 CA CA . C 2 CA X 1 93 3 CA CA . D 2 CA X 1 94 5 CA CA . E 3 ZN X 1 95 1 ZN ZN . F 4 HOH X 1 96 1 HOH HOH . F 4 HOH X 2 97 2 HOH HOH . F 4 HOH X 3 98 3 HOH HOH . F 4 HOH X 4 99 4 HOH HOH . F 4 HOH X 5 100 5 HOH HOH . F 4 HOH X 6 101 6 HOH HOH . F 4 HOH X 7 102 7 HOH HOH . F 4 HOH X 8 103 8 HOH HOH . F 4 HOH X 9 104 9 HOH HOH . F 4 HOH X 10 105 10 HOH HOH . F 4 HOH X 11 106 11 HOH HOH . F 4 HOH X 12 107 12 HOH HOH . F 4 HOH X 13 108 13 HOH HOH . F 4 HOH X 14 109 14 HOH HOH . F 4 HOH X 15 110 15 HOH HOH . F 4 HOH X 16 111 16 HOH HOH . F 4 HOH X 17 112 17 HOH HOH . F 4 HOH X 18 113 18 HOH HOH . F 4 HOH X 19 114 19 HOH HOH . F 4 HOH X 20 115 20 HOH HOH . F 4 HOH X 21 116 21 HOH HOH . F 4 HOH X 22 117 22 HOH HOH . F 4 HOH X 23 118 23 HOH HOH . F 4 HOH X 24 119 24 HOH HOH . F 4 HOH X 25 120 25 HOH HOH . F 4 HOH X 26 121 26 HOH HOH . F 4 HOH X 27 122 27 HOH HOH . F 4 HOH X 28 123 28 HOH HOH . F 4 HOH X 29 124 29 HOH HOH . F 4 HOH X 30 125 30 HOH HOH . F 4 HOH X 31 126 31 HOH HOH . F 4 HOH X 32 127 32 HOH HOH . F 4 HOH X 33 128 33 HOH HOH . F 4 HOH X 34 129 34 HOH HOH . F 4 HOH X 35 130 36 HOH HOH . F 4 HOH X 36 131 37 HOH HOH . F 4 HOH X 37 132 38 HOH HOH . F 4 HOH X 38 133 39 HOH HOH . F 4 HOH X 39 134 40 HOH HOH . F 4 HOH X 40 135 41 HOH HOH . F 4 HOH X 41 136 42 HOH HOH . F 4 HOH X 42 137 43 HOH HOH . F 4 HOH X 43 138 44 HOH HOH . F 4 HOH X 44 139 45 HOH HOH . F 4 HOH X 45 140 46 HOH HOH . F 4 HOH X 46 141 47 HOH HOH . F 4 HOH X 47 142 48 HOH HOH . F 4 HOH X 48 143 49 HOH HOH . F 4 HOH X 49 144 50 HOH HOH . F 4 HOH X 50 145 51 HOH HOH . F 4 HOH X 51 146 52 HOH HOH . F 4 HOH X 52 147 53 HOH HOH . F 4 HOH X 53 148 54 HOH HOH . F 4 HOH X 54 149 55 HOH HOH . F 4 HOH X 55 150 56 HOH HOH . F 4 HOH X 56 151 57 HOH HOH . F 4 HOH X 57 152 58 HOH HOH . F 4 HOH X 58 153 59 HOH HOH . F 4 HOH X 59 154 60 HOH HOH . F 4 HOH X 60 155 61 HOH HOH . F 4 HOH X 61 156 62 HOH HOH . F 4 HOH X 62 157 63 HOH HOH . F 4 HOH X 63 158 64 HOH HOH . F 4 HOH X 64 159 65 HOH HOH . F 4 HOH X 65 160 66 HOH HOH . F 4 HOH X 66 161 67 HOH HOH . F 4 HOH X 67 162 68 HOH HOH . F 4 HOH X 68 163 69 HOH HOH . F 4 HOH X 69 164 70 HOH HOH . F 4 HOH X 70 165 71 HOH HOH . F 4 HOH X 71 166 72 HOH HOH . F 4 HOH X 72 167 73 HOH HOH . F 4 HOH X 73 168 74 HOH HOH . F 4 HOH X 74 169 75 HOH HOH . F 4 HOH X 75 170 76 HOH HOH . F 4 HOH X 76 171 77 HOH HOH . F 4 HOH X 77 172 78 HOH HOH . F 4 HOH X 78 173 79 HOH HOH . F 4 HOH X 79 174 81 HOH HOH . F 4 HOH X 80 175 82 HOH HOH . F 4 HOH X 81 176 83 HOH HOH . F 4 HOH X 82 177 84 HOH HOH . F 4 HOH X 83 178 85 HOH HOH . F 4 HOH X 84 179 86 HOH HOH . F 4 HOH X 85 180 87 HOH HOH . F 4 HOH X 86 181 88 HOH HOH . F 4 HOH X 87 182 89 HOH HOH . F 4 HOH X 88 183 90 HOH HOH . F 4 HOH X 89 184 92 HOH HOH . F 4 HOH X 90 185 93 HOH HOH . F 4 HOH X 91 186 94 HOH HOH . F 4 HOH X 92 187 95 HOH HOH . F 4 HOH X 93 188 96 HOH HOH . F 4 HOH X 94 189 97 HOH HOH . F 4 HOH X 95 190 98 HOH HOH . F 4 HOH X 96 191 99 HOH HOH . F 4 HOH X 97 192 100 HOH HOH . F 4 HOH X 98 193 101 HOH HOH . F 4 HOH X 99 194 102 HOH HOH . F 4 HOH X 100 195 103 HOH HOH . F 4 HOH X 101 196 104 HOH HOH . F 4 HOH X 102 197 105 HOH HOH . F 4 HOH X 103 198 106 HOH HOH . F 4 HOH X 104 199 107 HOH HOH . F 4 HOH X 105 200 108 HOH HOH . F 4 HOH X 106 201 109 HOH HOH . F 4 HOH X 107 202 110 HOH HOH . F 4 HOH X 108 203 111 HOH HOH . F 4 HOH X 109 204 112 HOH HOH . F 4 HOH X 110 205 113 HOH HOH . F 4 HOH X 111 206 114 HOH HOH . F 4 HOH X 112 207 115 HOH HOH . F 4 HOH X 113 208 116 HOH HOH . F 4 HOH X 114 209 117 HOH HOH . F 4 HOH X 115 210 118 HOH HOH . F 4 HOH X 116 211 120 HOH HOH . F 4 HOH X 117 212 121 HOH HOH . F 4 HOH X 118 213 122 HOH HOH . F 4 HOH X 119 214 123 HOH HOH . F 4 HOH X 120 215 124 HOH HOH . F 4 HOH X 121 216 125 HOH HOH . F 4 HOH X 122 217 126 HOH HOH . F 4 HOH X 123 218 127 HOH HOH . F 4 HOH X 124 219 128 HOH HOH . F 4 HOH X 125 220 130 HOH HOH . F 4 HOH X 126 221 131 HOH HOH . F 4 HOH X 127 222 132 HOH HOH . F 4 HOH X 128 223 133 HOH HOH . F 4 HOH X 129 224 135 HOH HOH . F 4 HOH X 130 225 136 HOH HOH . F 4 HOH X 131 226 137 HOH HOH . F 4 HOH X 132 227 138 HOH HOH . F 4 HOH X 133 228 139 HOH HOH . F 4 HOH X 134 229 140 HOH HOH . F 4 HOH X 135 230 141 HOH HOH . F 4 HOH X 136 231 142 HOH HOH . F 4 HOH X 137 232 143 HOH HOH . F 4 HOH X 138 233 144 HOH HOH . F 4 HOH X 139 234 145 HOH HOH . F 4 HOH X 140 235 146 HOH HOH . F 4 HOH X 141 236 147 HOH HOH . F 4 HOH X 142 237 148 HOH HOH . F 4 HOH X 143 238 149 HOH HOH . F 4 HOH X 144 239 154 HOH HOH . F 4 HOH X 145 240 156 HOH HOH . F 4 HOH X 146 241 157 HOH HOH . F 4 HOH X 147 242 158 HOH HOH . F 4 HOH X 148 243 159 HOH HOH . F 4 HOH X 149 244 160 HOH HOH . F 4 HOH X 150 245 161 HOH HOH . F 4 HOH X 151 246 162 HOH HOH . F 4 HOH X 152 247 163 HOH HOH . F 4 HOH X 153 248 164 HOH HOH . F 4 HOH X 154 249 165 HOH HOH . F 4 HOH X 155 250 166 HOH HOH . F 4 HOH X 156 251 167 HOH HOH . F 4 HOH X 157 252 168 HOH HOH . F 4 HOH X 158 253 169 HOH HOH . F 4 HOH X 159 254 170 HOH HOH . F 4 HOH X 160 255 171 HOH HOH . F 4 HOH X 161 256 172 HOH HOH . F 4 HOH X 162 257 173 HOH HOH . F 4 HOH X 163 258 174 HOH HOH . F 4 HOH X 164 259 175 HOH HOH . F 4 HOH X 165 260 176 HOH HOH . F 4 HOH X 166 261 178 HOH HOH . F 4 HOH X 167 262 179 HOH HOH . F 4 HOH X 168 263 180 HOH HOH . F 4 HOH X 169 264 181 HOH HOH . F 4 HOH X 170 265 182 HOH HOH . F 4 HOH X 171 266 183 HOH HOH . F 4 HOH X 172 267 184 HOH HOH . F 4 HOH X 173 268 185 HOH HOH . F 4 HOH X 174 269 186 HOH HOH . F 4 HOH X 175 270 187 HOH HOH . F 4 HOH X 176 271 188 HOH HOH . F 4 HOH X 177 272 189 HOH HOH . F 4 HOH X 178 273 190 HOH HOH . F 4 HOH X 179 274 191 HOH HOH . F 4 HOH X 180 275 192 HOH HOH . F 4 HOH X 181 276 193 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -34.98 _atom_site.Cartn_y 18.305 _atom_site.Cartn_z 14.895 _atom_site.occupancy 0.45 _atom_site.B_iso_or_equiv 18.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 94 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #