data_3D00 # _model_server_result.job_id KUfFiDIxVEySECWjH6ZxQw _model_server_result.datetime_utc '2024-12-26 21:59:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d00 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 3D00 # _exptl.entry_id 3D00 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3D00 _cell.length_a 54.356 _cell.length_b 54.356 _cell.length_c 136.719 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D00 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 136.719 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 2 A MSE 1 1_555 A N THR 3 A THR 2 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale2 A C MSE 2 A MSE 1 1_555 A N THR 3 A THR 2 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.395 ? covale ? covale3 A C PHE 35 A PHE 34 1_555 A N MSE 36 A MSE 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale4 A C MSE 36 A MSE 35 1_555 A N VAL 37 A VAL 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale5 A C PRO 81 A PRO 80 1_555 A N MSE 82 A MSE 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 82 A MSE 81 1_555 A N GLY 83 A GLY 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale7 A C LYS 106 A LYS 105 1_555 A N MSE 107 A MSE 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale8 A C MSE 107 A MSE 106 1_555 A N GLY 108 A GLY 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A SG CYS 166 A CYS 165 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc2 A SG CYS 169 A CYS 168 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc3 A SG CYS 181 A CYS 180 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc4 A SG CYS 184 A CYS 183 1_555 B ZN ZN . A ZN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3D00 _atom_sites.fract_transf_matrix[1][1] 0.018397 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018397 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007314 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 200 200 ZN ZN . C 3 CL A 1 201 1 CL CL . D 4 HOH A 1 202 2 HOH HOH . D 4 HOH A 2 203 3 HOH HOH . D 4 HOH A 3 204 4 HOH HOH . D 4 HOH A 4 205 5 HOH HOH . D 4 HOH A 5 206 6 HOH HOH . D 4 HOH A 6 207 7 HOH HOH . D 4 HOH A 7 208 8 HOH HOH . D 4 HOH A 8 209 9 HOH HOH . D 4 HOH A 9 210 10 HOH HOH . D 4 HOH A 10 211 11 HOH HOH . D 4 HOH A 11 212 12 HOH HOH . D 4 HOH A 12 213 13 HOH HOH . D 4 HOH A 13 214 14 HOH HOH . D 4 HOH A 14 215 15 HOH HOH . D 4 HOH A 15 216 16 HOH HOH . D 4 HOH A 16 217 17 HOH HOH . D 4 HOH A 17 218 18 HOH HOH . D 4 HOH A 18 219 19 HOH HOH . D 4 HOH A 19 220 20 HOH HOH . D 4 HOH A 20 221 21 HOH HOH . D 4 HOH A 21 222 22 HOH HOH . D 4 HOH A 22 223 23 HOH HOH . D 4 HOH A 23 224 24 HOH HOH . D 4 HOH A 24 225 25 HOH HOH . D 4 HOH A 25 226 26 HOH HOH . D 4 HOH A 26 227 27 HOH HOH . D 4 HOH A 27 228 28 HOH HOH . D 4 HOH A 28 229 29 HOH HOH . D 4 HOH A 29 230 30 HOH HOH . D 4 HOH A 30 231 31 HOH HOH . D 4 HOH A 31 232 32 HOH HOH . D 4 HOH A 32 233 33 HOH HOH . D 4 HOH A 33 234 34 HOH HOH . D 4 HOH A 34 235 35 HOH HOH . D 4 HOH A 35 236 36 HOH HOH . D 4 HOH A 36 237 37 HOH HOH . D 4 HOH A 37 238 38 HOH HOH . D 4 HOH A 38 239 39 HOH HOH . D 4 HOH A 39 240 40 HOH HOH . D 4 HOH A 40 241 41 HOH HOH . D 4 HOH A 41 242 42 HOH HOH . D 4 HOH A 42 243 43 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.733 _atom_site.Cartn_y 2.841 _atom_site.Cartn_z 83.723 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 38.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 200 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #