data_3D0J
#
_model_server_result.job_id            U8vUkrMuJweWbc-oZ_xm3g 
_model_server_result.datetime_utc      '2024-12-22 01:14:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3d0j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":141}' 
#
_entry.id    3D0J 
#
_exptl.entry_id    3D0J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.025 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FORMIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3D0J 
_cell.length_a            52.878 
_cell.length_b            52.878 
_cell.length_c            112.28 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3D0J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 37.426667 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 18 A CYS 15 1_555 A SG CYS 28 A CYS 25 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.003 ? 
covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.321 ? 
covale ? covale2 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.337 ? 
covale ? covale3 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.334 ? 
covale ? covale4 A C MSE 4 A MSE 1 1_555 A N LYS 5 A LYS 2 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.316 ? 
covale ? covale5 A C LEU 79 A LEU 76 1_555 A N MSE 80 A MSE 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale6 A C MSE 80 A MSE 77 1_555 A N GLU 81 A GLU 78 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.336 ? 
covale ? covale7 A C MSE 80 A MSE 77 1_555 A N GLU 81 A GLU 78 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.336 ? 
covale ? covale8 A C LYS 103 A LYS 100 1_555 A N MSE 104 A MSE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale9 A C MSE 104 A MSE 101 1_555 A N MSE 105 A MSE 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale10 A C MSE 105 A MSE 102 1_555 A N TYR 106 A TYR 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale11 A C SER 113 A SER 110 1_555 A N MSE 114 A MSE 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale12 A C MSE 114 A MSE 111 1_555 A N ASP 115 A ASP 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
#
_chem_comp.formula           'C H2 O2' 
_chem_comp.formula_weight    46.025 
_chem_comp.id                FMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FORMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O1 FMT doub 83 n n 
C O2 FMT sing 84 n n 
C H FMT sing 85 n n 
O2 HO2 FMT sing 86 n n 
#
_atom_sites.entry_id                     3D0J 
_atom_sites.fract_transf_matrix[1][1]    0.018911 
_atom_sites.fract_transf_matrix[1][2]    0.010919 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021837 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008906 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMT A 1 138 1 FMT FMT . 
C 2 FMT A 1 139 2 FMT FMT . 
D 2 FMT A 1 140 3 FMT FMT . 
E 2 FMT A 1 141 4 FMT FMT . 
F 3 GOL A 1 142 5 GOL GOL . 
G 4 HOH A 1 143 1 HOH HOH . 
G 4 HOH A 2 144 2 HOH HOH . 
G 4 HOH A 3 145 3 HOH HOH . 
G 4 HOH A 4 146 4 HOH HOH . 
G 4 HOH A 5 147 5 HOH HOH . 
G 4 HOH A 6 148 6 HOH HOH . 
G 4 HOH A 7 149 7 HOH HOH . 
G 4 HOH A 8 150 8 HOH HOH . 
G 4 HOH A 9 151 9 HOH HOH . 
G 4 HOH A 10 152 10 HOH HOH . 
G 4 HOH A 11 153 11 HOH HOH . 
G 4 HOH A 12 154 12 HOH HOH . 
G 4 HOH A 13 155 13 HOH HOH . 
G 4 HOH A 14 156 14 HOH HOH . 
G 4 HOH A 15 157 15 HOH HOH . 
G 4 HOH A 16 158 16 HOH HOH . 
G 4 HOH A 17 159 17 HOH HOH . 
G 4 HOH A 18 160 18 HOH HOH . 
G 4 HOH A 19 161 19 HOH HOH . 
G 4 HOH A 20 162 20 HOH HOH . 
G 4 HOH A 21 163 21 HOH HOH . 
G 4 HOH A 22 164 22 HOH HOH . 
G 4 HOH A 23 165 23 HOH HOH . 
G 4 HOH A 24 166 24 HOH HOH . 
G 4 HOH A 25 167 25 HOH HOH . 
G 4 HOH A 26 168 26 HOH HOH . 
G 4 HOH A 27 169 27 HOH HOH . 
G 4 HOH A 28 170 28 HOH HOH . 
G 4 HOH A 29 171 29 HOH HOH . 
G 4 HOH A 30 172 30 HOH HOH . 
G 4 HOH A 31 173 31 HOH HOH . 
G 4 HOH A 32 174 32 HOH HOH . 
G 4 HOH A 33 175 33 HOH HOH . 
G 4 HOH A 34 176 34 HOH HOH . 
G 4 HOH A 35 177 35 HOH HOH . 
G 4 HOH A 36 178 36 HOH HOH . 
G 4 HOH A 37 179 37 HOH HOH . 
G 4 HOH A 38 180 38 HOH HOH . 
G 4 HOH A 39 181 39 HOH HOH . 
G 4 HOH A 40 182 40 HOH HOH . 
G 4 HOH A 41 183 41 HOH HOH . 
G 4 HOH A 42 184 42 HOH HOH . 
G 4 HOH A 43 185 43 HOH HOH . 
G 4 HOH A 44 186 44 HOH HOH . 
G 4 HOH A 45 187 45 HOH HOH . 
G 4 HOH A 46 188 46 HOH HOH . 
G 4 HOH A 47 189 47 HOH HOH . 
G 4 HOH A 48 190 48 HOH HOH . 
G 4 HOH A 49 191 49 HOH HOH . 
G 4 HOH A 50 192 50 HOH HOH . 
G 4 HOH A 51 193 51 HOH HOH . 
G 4 HOH A 52 194 52 HOH HOH . 
G 4 HOH A 53 195 53 HOH HOH . 
G 4 HOH A 54 196 54 HOH HOH . 
G 4 HOH A 55 197 55 HOH HOH . 
G 4 HOH A 56 198 56 HOH HOH . 
G 4 HOH A 57 199 57 HOH HOH . 
G 4 HOH A 58 200 58 HOH HOH . 
G 4 HOH A 59 201 59 HOH HOH . 
G 4 HOH A 60 202 60 HOH HOH . 
G 4 HOH A 61 203 61 HOH HOH . 
G 4 HOH A 62 204 62 HOH HOH . 
G 4 HOH A 63 205 63 HOH HOH . 
G 4 HOH A 64 206 64 HOH HOH . 
G 4 HOH A 65 207 65 HOH HOH . 
G 4 HOH A 66 208 66 HOH HOH . 
G 4 HOH A 67 209 67 HOH HOH . 
G 4 HOH A 68 210 68 HOH HOH . 
G 4 HOH A 69 211 69 HOH HOH . 
G 4 HOH A 70 212 70 HOH HOH . 
G 4 HOH A 71 213 71 HOH HOH . 
G 4 HOH A 72 214 72 HOH HOH . 
G 4 HOH A 73 215 73 HOH HOH . 
G 4 HOH A 74 216 74 HOH HOH . 
G 4 HOH A 75 217 75 HOH HOH . 
G 4 HOH A 76 218 76 HOH HOH . 
G 4 HOH A 77 219 77 HOH HOH . 
G 4 HOH A 78 220 78 HOH HOH . 
G 4 HOH A 79 221 79 HOH HOH . 
G 4 HOH A 80 222 80 HOH HOH . 
G 4 HOH A 81 223 81 HOH HOH . 
G 4 HOH A 82 224 82 HOH HOH . 
G 4 HOH A 83 225 83 HOH HOH . 
G 4 HOH A 84 226 84 HOH HOH . 
G 4 HOH A 85 227 85 HOH HOH . 
G 4 HOH A 86 228 86 HOH HOH . 
G 4 HOH A 87 229 87 HOH HOH . 
G 4 HOH A 88 230 88 HOH HOH . 
G 4 HOH A 89 231 89 HOH HOH . 
G 4 HOH A 90 232 90 HOH HOH . 
G 4 HOH A 91 233 91 HOH HOH . 
G 4 HOH A 92 234 92 HOH HOH . 
G 4 HOH A 93 235 93 HOH HOH . 
G 4 HOH A 94 236 94 HOH HOH . 
G 4 HOH A 95 237 95 HOH HOH . 
G 4 HOH A 96 238 96 HOH HOH . 
G 4 HOH A 97 239 97 HOH HOH . 
G 4 HOH A 98 240 98 HOH HOH . 
G 4 HOH A 99 241 99 HOH HOH . 
G 4 HOH A 100 242 100 HOH HOH . 
G 4 HOH A 101 243 101 HOH HOH . 
G 4 HOH A 102 244 102 HOH HOH . 
G 4 HOH A 103 245 103 HOH HOH . 
G 4 HOH A 104 246 104 HOH HOH . 
G 4 HOH A 105 247 105 HOH HOH . 
G 4 HOH A 106 248 106 HOH HOH . 
G 4 HOH A 107 249 107 HOH HOH . 
G 4 HOH A 108 250 108 HOH HOH . 
G 4 HOH A 109 251 109 HOH HOH . 
G 4 HOH A 110 252 110 HOH HOH . 
G 4 HOH A 111 253 111 HOH HOH . 
G 4 HOH A 112 254 112 HOH HOH . 
G 4 HOH A 113 255 113 HOH HOH . 
G 4 HOH A 114 256 114 HOH HOH . 
G 4 HOH A 115 257 115 HOH HOH . 
G 4 HOH A 116 258 116 HOH HOH . 
G 4 HOH A 117 259 117 HOH HOH . 
G 4 HOH A 118 260 118 HOH HOH . 
G 4 HOH A 119 261 119 HOH HOH . 
G 4 HOH A 120 262 120 HOH HOH . 
G 4 HOH A 121 263 121 HOH HOH . 
G 4 HOH A 122 264 122 HOH HOH . 
G 4 HOH A 123 265 123 HOH HOH . 
G 4 HOH A 124 266 124 HOH HOH . 
G 4 HOH A 125 267 125 HOH HOH . 
G 4 HOH A 126 268 126 HOH HOH . 
G 4 HOH A 127 269 127 HOH HOH . 
G 4 HOH A 128 270 128 HOH HOH . 
G 4 HOH A 129 271 129 HOH HOH . 
G 4 HOH A 130 272 130 HOH HOH . 
G 4 HOH A 131 273 131 HOH HOH . 
G 4 HOH A 132 274 132 HOH HOH . 
G 4 HOH A 133 275 133 HOH HOH . 
G 4 HOH A 134 276 134 HOH HOH . 
G 4 HOH A 135 277 135 HOH HOH . 
G 4 HOH A 136 278 136 HOH HOH . 
G 4 HOH A 137 279 137 HOH HOH . 
G 4 HOH A 138 280 138 HOH HOH . 
G 4 HOH A 139 281 139 HOH HOH . 
G 4 HOH A 140 282 140 HOH HOH . 
G 4 HOH A 141 283 141 HOH HOH . 
G 4 HOH A 142 284 142 HOH HOH . 
G 4 HOH A 143 285 143 HOH HOH . 
G 4 HOH A 144 286 144 HOH HOH . 
G 4 HOH A 145 287 145 HOH HOH . 
G 4 HOH A 146 288 146 HOH HOH . 
G 4 HOH A 147 289 147 HOH HOH . 
G 4 HOH A 148 290 148 HOH HOH . 
G 4 HOH A 149 291 149 HOH HOH . 
G 4 HOH A 150 292 150 HOH HOH . 
G 4 HOH A 151 293 151 HOH HOH . 
G 4 HOH A 152 294 152 HOH HOH . 
G 4 HOH A 153 295 153 HOH HOH . 
G 4 HOH A 154 296 154 HOH HOH . 
G 4 HOH A 155 297 155 HOH HOH . 
G 4 HOH A 156 298 156 HOH HOH . 
G 4 HOH A 157 299 157 HOH HOH . 
G 4 HOH A 158 300 158 HOH HOH . 
G 4 HOH A 159 301 159 HOH HOH . 
G 4 HOH A 160 302 160 HOH HOH . 
G 4 HOH A 161 303 161 HOH HOH . 
G 4 HOH A 162 304 162 HOH HOH . 
G 4 HOH A 163 305 163 HOH HOH . 
G 4 HOH A 164 306 164 HOH HOH . 
G 4 HOH A 165 307 165 HOH HOH . 
G 4 HOH A 166 308 166 HOH HOH . 
G 4 HOH A 167 309 167 HOH HOH . 
G 4 HOH A 168 310 168 HOH HOH . 
G 4 HOH A 169 311 169 HOH HOH . 
G 4 HOH A 170 312 170 HOH HOH . 
G 4 HOH A 171 313 171 HOH HOH . 
G 4 HOH A 172 314 172 HOH HOH . 
G 4 HOH A 173 315 173 HOH HOH . 
G 4 HOH A 174 316 174 HOH HOH . 
G 4 HOH A 175 317 175 HOH HOH . 
G 4 HOH A 176 318 176 HOH HOH . 
G 4 HOH A 177 319 177 HOH HOH . 
G 4 HOH A 178 320 178 HOH HOH . 
G 4 HOH A 179 321 179 HOH HOH . 
G 4 HOH A 180 322 180 HOH HOH . 
G 4 HOH A 181 323 181 HOH HOH . 
G 4 HOH A 182 324 182 HOH HOH . 
G 4 HOH A 183 325 183 HOH HOH . 
G 4 HOH A 184 326 184 HOH HOH . 
G 4 HOH A 185 327 185 HOH HOH . 
G 4 HOH A 186 328 186 HOH HOH . 
G 4 HOH A 187 329 187 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C FMT . . . E 2 24.167 -11.77 9.979 1 29.26 ? C FMT 141 A 1 
HETATM 2 O O1 FMT . . . E 2 24.262 -11.455 11.167 1 24.41 ? O1 FMT 141 A 1 
HETATM 3 O O2 FMT . . . E 2 24.013 -12.97 9.615 1 31.69 ? O2 FMT 141 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           3 
#