data_3D0Q # _model_server_result.job_id npECy52YsqvXMwYOgz_2eA _model_server_result.datetime_utc '2025-09-07 00:28:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 3D0Q # _exptl.entry_id 3D0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 209.263 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3[N-MORPHOLINO]PROPANE SULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3D0Q _cell.length_a 106.654 _cell.length_b 119.267 _cell.length_c 155.942 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C HIS 20 A HIS -2 1_555 A N MSE 21 A MSE -1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 21 A MSE -1 1_555 A N ARG 22 A ARG 0 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C THR 122 A THR 100 1_555 A N MSE 123 A MSE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 123 A MSE 101 1_555 A N ALA 124 A ALA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C GLY 166 A GLY 144 1_555 A N MSE 167 A MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 167 A MSE 145 1_555 A N HIS 168 A HIS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 A C LEU 178 A LEU 156 1_555 A N MSE 179 A MSE 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale8 A C MSE 179 A MSE 157 1_555 A N ASP 180 A ASP 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale9 A C PHE 210 A PHE 188 1_555 A N MSE 211 A MSE 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale10 A C MSE 211 A MSE 189 1_555 A N ARG 212 A ARG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 A C THR 238 A THR 216 1_555 A N MSE 239 A MSE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 A C MSE 239 A MSE 217 1_555 A N GLY 240 A GLY 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale13 A C VAL 312 A VAL 290 1_555 A N MSE 313 A MSE 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale14 A C MSE 313 A MSE 291 1_555 A N THR 314 A THR 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale15 A C GLU 378 A GLU 356 1_555 A N MSE 379 A MSE 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale16 A C MSE 379 A MSE 357 1_555 A N VAL 380 A VAL 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale17 B C HIS 20 B HIS -2 1_555 B N MSE 21 B MSE -1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale18 B C MSE 21 B MSE -1 1_555 B N ARG 22 B ARG 0 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale19 B C THR 122 B THR 100 1_555 B N MSE 123 B MSE 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale20 B C MSE 123 B MSE 101 1_555 B N ALA 124 B ALA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale21 B C GLY 166 B GLY 144 1_555 B N MSE 167 B MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale22 B C MSE 167 B MSE 145 1_555 B N HIS 168 B HIS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale23 B C LEU 178 B LEU 156 1_555 B N MSE 179 B MSE 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale24 B C MSE 179 B MSE 157 1_555 B N ASP 180 B ASP 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale25 B C PHE 210 B PHE 188 1_555 B N MSE 211 B MSE 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale26 B C MSE 211 B MSE 189 1_555 B N ARG 212 B ARG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale27 B C THR 238 B THR 216 1_555 B N MSE 239 B MSE 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale28 B C MSE 239 B MSE 217 1_555 B N GLY 240 B GLY 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale29 B C VAL 312 B VAL 290 1_555 B N MSE 313 B MSE 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale30 B C MSE 313 B MSE 291 1_555 B N THR 314 B THR 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale31 B C GLU 378 B GLU 356 1_555 B N MSE 379 B MSE 357 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale32 B C MSE 379 B MSE 357 1_555 B N VAL 380 B VAL 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'C7 H15 N O4 S' _chem_comp.formula_weight 209.263 _chem_comp.id MPO _chem_comp.mon_nstd_flag . _chem_comp.name '3[N-MORPHOLINO]PROPANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 O1 MPO doub 218 n n S1 O2 MPO doub 219 n n S1 C1 MPO sing 220 n n S1 O3 MPO sing 221 n n O4 C5 MPO sing 222 n n O4 C6 MPO sing 223 n n N1 C3 MPO sing 224 n n N1 C4 MPO sing 225 n n N1 C7 MPO sing 226 n n C1 C2 MPO sing 227 n n C1 H11 MPO sing 228 n n C1 H12 MPO sing 229 n n O3 HO3 MPO sing 230 n n C2 C3 MPO sing 231 n n C2 H21 MPO sing 232 n n C2 H22 MPO sing 233 n n C3 H31 MPO sing 234 n n C3 H32 MPO sing 235 n n C4 C5 MPO sing 236 n n C4 H41 MPO sing 237 n n C4 H42 MPO sing 238 n n C5 H51 MPO sing 239 n n C5 H52 MPO sing 240 n n C6 C7 MPO sing 241 n n C6 H61 MPO sing 242 n n C6 H62 MPO sing 243 n n C7 H71 MPO sing 244 n n C7 H72 MPO sing 245 n n # _atom_sites.entry_id 3D0Q _atom_sites.fract_transf_matrix[1][1] 0.009376 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MPO A 1 401 401 MPO MPO . D 2 MPO B 1 401 401 MPO MPO . E 3 HOH A 1 402 1 HOH HOH . E 3 HOH A 2 403 2 HOH HOH . E 3 HOH A 3 404 3 HOH HOH . E 3 HOH A 4 405 4 HOH HOH . E 3 HOH A 5 406 5 HOH HOH . E 3 HOH A 6 407 6 HOH HOH . E 3 HOH A 7 408 7 HOH HOH . E 3 HOH A 8 409 8 HOH HOH . E 3 HOH A 9 410 9 HOH HOH . E 3 HOH A 10 411 10 HOH HOH . E 3 HOH A 11 412 11 HOH HOH . E 3 HOH A 12 413 12 HOH HOH . E 3 HOH A 13 414 13 HOH HOH . E 3 HOH A 14 415 15 HOH HOH . E 3 HOH A 15 416 16 HOH HOH . E 3 HOH A 16 417 18 HOH HOH . E 3 HOH A 17 418 19 HOH HOH . E 3 HOH A 18 419 21 HOH HOH . E 3 HOH A 19 420 22 HOH HOH . E 3 HOH A 20 421 43 HOH HOH . E 3 HOH A 21 422 44 HOH HOH . E 3 HOH A 22 423 45 HOH HOH . F 3 HOH B 1 402 14 HOH HOH . F 3 HOH B 2 403 17 HOH HOH . F 3 HOH B 3 404 20 HOH HOH . F 3 HOH B 4 405 23 HOH HOH . F 3 HOH B 5 406 24 HOH HOH . F 3 HOH B 6 407 25 HOH HOH . F 3 HOH B 7 408 26 HOH HOH . F 3 HOH B 8 409 27 HOH HOH . F 3 HOH B 9 410 28 HOH HOH . F 3 HOH B 10 411 29 HOH HOH . F 3 HOH B 11 412 30 HOH HOH . F 3 HOH B 12 413 31 HOH HOH . F 3 HOH B 13 414 32 HOH HOH . F 3 HOH B 14 415 33 HOH HOH . F 3 HOH B 15 416 34 HOH HOH . F 3 HOH B 16 417 35 HOH HOH . F 3 HOH B 17 418 36 HOH HOH . F 3 HOH B 18 419 37 HOH HOH . F 3 HOH B 19 420 38 HOH HOH . F 3 HOH B 20 421 39 HOH HOH . F 3 HOH B 21 422 40 HOH HOH . F 3 HOH B 22 423 41 HOH HOH . F 3 HOH B 23 424 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 MPO . . . D 2 -26.178 -37.772 18.314 1 45.62 ? S1 MPO 401 B 1 HETATM 2 O O1 MPO . . . D 2 -24.883 -37.198 18.787 1 53.2 ? O1 MPO 401 B 1 HETATM 3 O O2 MPO . . . D 2 -26.223 -37.513 16.843 1 56.24 ? O2 MPO 401 B 1 HETATM 4 O O4 MPO . . . D 2 -32.129 -33.576 18.715 1 40 ? O4 MPO 401 B 1 HETATM 5 N N1 MPO . . . D 2 -29.728 -34.372 19.461 1 37.8 ? N1 MPO 401 B 1 HETATM 6 C C1 MPO . . . D 2 -27.575 -36.923 19.133 1 35.77 ? C1 MPO 401 B 1 HETATM 7 O O3 MPO . . . D 2 -26.245 -39.251 18.596 1 34.02 ? O3 MPO 401 B 1 HETATM 8 C C2 MPO . . . D 2 -27.618 -35.441 18.784 1 23.37 ? C2 MPO 401 B 1 HETATM 9 C C3 MPO . . . D 2 -29.035 -35.049 18.344 1 35.86 ? C3 MPO 401 B 1 HETATM 10 C C4 MPO . . . D 2 -30.861 -35.207 19.984 1 38.27 ? C4 MPO 401 B 1 HETATM 11 C C5 MPO . . . D 2 -32.261 -34.724 19.574 1 40.37 ? C5 MPO 401 B 1 HETATM 12 C C6 MPO . . . D 2 -31.407 -32.566 19.417 1 29.87 ? C6 MPO 401 B 1 HETATM 13 C C7 MPO . . . D 2 -30.003 -32.974 19.04 1 32.82 ? C7 MPO 401 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #