data_3D17 # _model_server_result.job_id b_37GvVfTx0irQMgObNd6g _model_server_result.datetime_utc '2024-10-22 21:52:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d17 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":142}' # _entry.id 3D17 # _exptl.entry_id 3D17 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 28.01 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CARBON MONOXIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3D17 _cell.length_a 87.282 _cell.length_b 87.282 _cell.length_c 174.466 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D17 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 K N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 E FE HEM . A HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc2 G C CMO . A CMO 142 1_555 E FE HEM . A HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc3 B NE2 HIS 92 B HIS 92 1_555 J FE HEM . B HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc4 K C CMO . B CMO 147 1_555 J FE HEM . B HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.878 ? metalc ? metalc5 C NE2 HIS 87 C HIS 87 1_555 L FE HEM . C HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc6 D NE2 HIS 92 D HIS 92 1_555 N FE HEM . D HEM 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc7 N FE HEM . D HEM 148 1_555 O C CMO . D CMO 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? # _chem_comp.formula 'C O' _chem_comp.formula_weight 28.01 _chem_comp.id CMO _chem_comp.mon_nstd_flag . _chem_comp.name 'CARBON MONOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 C _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id CMO _chem_comp_bond.value_order trip _chem_comp_bond.pdbx_ordinal 70 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 3D17 _atom_sites.fract_transf_matrix[1][1] 0.011457 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011457 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 143 143 HEM HEM . F 4 MBN A 1 144 1 MBN MBN . G 5 CMO A 1 142 142 CMO CO . H 6 PO4 B 1 148 1 PO4 PO4 . I 6 PO4 B 1 149 5 PO4 PO4 . J 3 HEM B 1 150 148 HEM HEM . K 5 CMO B 1 147 147 CMO CO . L 3 HEM C 1 143 143 HEM HEM . M 6 PO4 D 1 147 3 PO4 PO4 . N 3 HEM D 1 148 148 HEM HEM . O 5 CMO D 1 149 147 CMO CO . P 7 HOH A 1 145 1 HOH HOH . P 7 HOH A 2 146 2 HOH HOH . P 7 HOH A 3 147 3 HOH HOH . P 7 HOH A 4 148 4 HOH HOH . P 7 HOH A 5 149 10 HOH HOH . P 7 HOH A 6 150 11 HOH HOH . P 7 HOH A 7 151 17 HOH HOH . P 7 HOH A 8 152 18 HOH HOH . P 7 HOH A 9 153 19 HOH HOH . P 7 HOH A 10 154 20 HOH HOH . P 7 HOH A 11 155 21 HOH HOH . P 7 HOH A 12 156 22 HOH HOH . P 7 HOH A 13 157 25 HOH HOH . P 7 HOH A 14 158 26 HOH HOH . P 7 HOH A 15 159 37 HOH HOH . P 7 HOH A 16 160 38 HOH HOH . P 7 HOH A 17 161 39 HOH HOH . P 7 HOH A 18 162 41 HOH HOH . P 7 HOH A 19 163 42 HOH HOH . P 7 HOH A 20 164 43 HOH HOH . P 7 HOH A 21 165 44 HOH HOH . P 7 HOH A 22 166 45 HOH HOH . P 7 HOH A 23 167 58 HOH HOH . P 7 HOH A 24 168 63 HOH HOH . P 7 HOH A 25 169 66 HOH HOH . P 7 HOH A 26 170 67 HOH HOH . P 7 HOH A 27 171 72 HOH HOH . P 7 HOH A 28 172 73 HOH HOH . P 7 HOH A 29 173 84 HOH HOH . Q 7 HOH B 1 151 8 HOH HOH . Q 7 HOH B 2 152 9 HOH HOH . Q 7 HOH B 3 153 16 HOH HOH . Q 7 HOH B 4 154 24 HOH HOH . Q 7 HOH B 5 155 27 HOH HOH . Q 7 HOH B 6 156 28 HOH HOH . Q 7 HOH B 7 157 29 HOH HOH . Q 7 HOH B 8 158 30 HOH HOH . Q 7 HOH B 9 159 46 HOH HOH . Q 7 HOH B 10 160 48 HOH HOH . Q 7 HOH B 11 161 49 HOH HOH . Q 7 HOH B 12 162 50 HOH HOH . Q 7 HOH B 13 163 51 HOH HOH . Q 7 HOH B 14 164 56 HOH HOH . Q 7 HOH B 15 165 57 HOH HOH . Q 7 HOH B 16 166 64 HOH HOH . Q 7 HOH B 17 167 78 HOH HOH . Q 7 HOH B 18 168 79 HOH HOH . Q 7 HOH B 19 169 83 HOH HOH . Q 7 HOH B 20 170 87 HOH HOH . Q 7 HOH B 21 171 88 HOH HOH . R 7 HOH C 1 144 5 HOH HOH . R 7 HOH C 2 145 12 HOH HOH . R 7 HOH C 3 146 23 HOH HOH . R 7 HOH C 4 147 31 HOH HOH . R 7 HOH C 5 148 32 HOH HOH . R 7 HOH C 6 149 33 HOH HOH . R 7 HOH C 7 150 52 HOH HOH . R 7 HOH C 8 151 53 HOH HOH . R 7 HOH C 9 152 68 HOH HOH . R 7 HOH C 10 153 69 HOH HOH . R 7 HOH C 11 154 74 HOH HOH . R 7 HOH C 12 155 75 HOH HOH . R 7 HOH C 13 156 76 HOH HOH . R 7 HOH C 14 157 77 HOH HOH . R 7 HOH C 15 158 85 HOH HOH . R 7 HOH C 16 159 86 HOH HOH . S 7 HOH D 1 150 6 HOH HOH . S 7 HOH D 2 151 7 HOH HOH . S 7 HOH D 3 152 13 HOH HOH . S 7 HOH D 4 153 14 HOH HOH . S 7 HOH D 5 154 15 HOH HOH . S 7 HOH D 6 155 34 HOH HOH . S 7 HOH D 7 156 35 HOH HOH . S 7 HOH D 8 157 36 HOH HOH . S 7 HOH D 9 158 40 HOH HOH . S 7 HOH D 10 159 47 HOH HOH . S 7 HOH D 11 160 54 HOH HOH . S 7 HOH D 12 161 55 HOH HOH . S 7 HOH D 13 162 59 HOH HOH . S 7 HOH D 14 163 60 HOH HOH . S 7 HOH D 15 164 61 HOH HOH . S 7 HOH D 16 165 62 HOH HOH . S 7 HOH D 17 166 65 HOH HOH . S 7 HOH D 18 167 70 HOH HOH . S 7 HOH D 19 168 71 HOH HOH . S 7 HOH D 20 169 80 HOH HOH . S 7 HOH D 21 170 81 HOH HOH . S 7 HOH D 22 171 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C CMO . . . G 5 14.888 60.053 30.998 0.8 31.42 ? C CMO 142 A 1 HETATM 2 O O CMO . . . G 5 15.843 60.813 30.807 0.8 31.77 ? O CMO 142 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 2 #