data_3D27 # _model_server_result.job_id DNGc4Sjny_5L8RLIBtmV7w _model_server_result.datetime_utc '2024-11-05 04:57:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d27 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2}' # _entry.id 3D27 # _exptl.entry_id 3D27 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.47 _cell.angle_gamma 90 _cell.entry_id 3D27 _cell.length_a 38.51 _cell.length_b 59.88 _cell.length_c 54.88 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D27 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B MN MN . A MN 1 1_555 A OD2 ASP 105 A ASP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc2 B MN MN . A MN 1 1_555 A OE2 GLU 201 A GLU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 B MN MN . A MN 1 1_555 A OE2 GLU 232 A GLU 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc4 B MN MN . A MN 1 1_555 D O1 W29 . A W29 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc5 B MN MN . A MN 1 1_555 D O2 W29 . A W29 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc6 C MN MN . A MN 2 1_555 A OD1 ASP 94 A ASP 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc7 C MN MN . A MN 2 1_555 A OD1 ASP 105 A ASP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc8 C MN MN . A MN 2 1_555 A OE1 GLU 232 A GLU 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc9 C MN MN . A MN 2 1_555 D O2 W29 . A W29 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc10 C MN MN . A MN 2 1_555 E O HOH . A HOH 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3D27 _atom_sites.fract_transf_matrix[1][1] 0.025967 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007677 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0167 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019001 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 1 1 MN MN . C 2 MN A 1 2 2 MN MN . D 3 W29 A 1 265 1 W29 W29 . E 4 HOH A 1 266 1 HOH HOH . E 4 HOH A 2 267 2 HOH HOH . E 4 HOH A 3 268 3 HOH HOH . E 4 HOH A 4 269 4 HOH HOH . E 4 HOH A 5 270 5 HOH HOH . E 4 HOH A 6 271 6 HOH HOH . E 4 HOH A 7 272 7 HOH HOH . E 4 HOH A 8 273 8 HOH HOH . E 4 HOH A 9 274 9 HOH HOH . E 4 HOH A 10 275 10 HOH HOH . E 4 HOH A 11 276 11 HOH HOH . E 4 HOH A 12 277 12 HOH HOH . E 4 HOH A 13 278 13 HOH HOH . E 4 HOH A 14 279 14 HOH HOH . E 4 HOH A 15 280 15 HOH HOH . E 4 HOH A 16 281 16 HOH HOH . E 4 HOH A 17 282 17 HOH HOH . E 4 HOH A 18 283 18 HOH HOH . E 4 HOH A 19 284 19 HOH HOH . E 4 HOH A 20 285 20 HOH HOH . E 4 HOH A 21 286 21 HOH HOH . E 4 HOH A 22 287 23 HOH HOH . E 4 HOH A 23 288 24 HOH HOH . E 4 HOH A 24 289 25 HOH HOH . E 4 HOH A 25 290 26 HOH HOH . E 4 HOH A 26 291 27 HOH HOH . E 4 HOH A 27 292 28 HOH HOH . E 4 HOH A 28 293 29 HOH HOH . E 4 HOH A 29 294 30 HOH HOH . E 4 HOH A 30 295 31 HOH HOH . E 4 HOH A 31 296 32 HOH HOH . E 4 HOH A 32 297 33 HOH HOH . E 4 HOH A 33 298 34 HOH HOH . E 4 HOH A 34 299 35 HOH HOH . E 4 HOH A 35 300 36 HOH HOH . E 4 HOH A 36 301 37 HOH HOH . E 4 HOH A 37 302 38 HOH HOH . E 4 HOH A 38 303 39 HOH HOH . E 4 HOH A 39 304 40 HOH HOH . E 4 HOH A 40 305 41 HOH HOH . E 4 HOH A 41 306 42 HOH HOH . E 4 HOH A 42 307 44 HOH HOH . E 4 HOH A 43 308 46 HOH HOH . E 4 HOH A 44 309 47 HOH HOH . E 4 HOH A 45 310 48 HOH HOH . E 4 HOH A 46 311 49 HOH HOH . E 4 HOH A 47 312 50 HOH HOH . E 4 HOH A 48 313 51 HOH HOH . E 4 HOH A 49 314 52 HOH HOH . E 4 HOH A 50 315 54 HOH HOH . E 4 HOH A 51 316 55 HOH HOH . E 4 HOH A 52 317 56 HOH HOH . E 4 HOH A 53 318 57 HOH HOH . E 4 HOH A 54 319 58 HOH HOH . E 4 HOH A 55 320 60 HOH HOH . E 4 HOH A 56 321 61 HOH HOH . E 4 HOH A 57 322 62 HOH HOH . E 4 HOH A 58 323 63 HOH HOH . E 4 HOH A 59 324 64 HOH HOH . E 4 HOH A 60 325 65 HOH HOH . E 4 HOH A 61 326 66 HOH HOH . E 4 HOH A 62 327 69 HOH HOH . E 4 HOH A 63 328 70 HOH HOH . E 4 HOH A 64 329 71 HOH HOH . E 4 HOH A 65 330 72 HOH HOH . E 4 HOH A 66 331 73 HOH HOH . E 4 HOH A 67 332 74 HOH HOH . E 4 HOH A 68 333 75 HOH HOH . E 4 HOH A 69 334 76 HOH HOH . E 4 HOH A 70 335 77 HOH HOH . E 4 HOH A 71 336 78 HOH HOH . E 4 HOH A 72 337 79 HOH HOH . E 4 HOH A 73 338 80 HOH HOH . E 4 HOH A 74 339 81 HOH HOH . E 4 HOH A 75 340 82 HOH HOH . E 4 HOH A 76 341 85 HOH HOH . E 4 HOH A 77 342 87 HOH HOH . E 4 HOH A 78 343 88 HOH HOH . E 4 HOH A 79 344 89 HOH HOH . E 4 HOH A 80 345 90 HOH HOH . E 4 HOH A 81 346 91 HOH HOH . E 4 HOH A 82 347 92 HOH HOH . E 4 HOH A 83 348 93 HOH HOH . E 4 HOH A 84 349 94 HOH HOH . E 4 HOH A 85 350 95 HOH HOH . E 4 HOH A 86 351 96 HOH HOH . E 4 HOH A 87 352 97 HOH HOH . E 4 HOH A 88 353 98 HOH HOH . E 4 HOH A 89 354 99 HOH HOH . E 4 HOH A 90 355 100 HOH HOH . E 4 HOH A 91 356 101 HOH HOH . E 4 HOH A 92 357 102 HOH HOH . E 4 HOH A 93 358 103 HOH HOH . E 4 HOH A 94 359 104 HOH HOH . E 4 HOH A 95 360 106 HOH HOH . E 4 HOH A 96 361 107 HOH HOH . E 4 HOH A 97 362 108 HOH HOH . E 4 HOH A 98 363 109 HOH HOH . E 4 HOH A 99 364 112 HOH HOH . E 4 HOH A 100 365 113 HOH HOH . E 4 HOH A 101 366 114 HOH HOH . E 4 HOH A 102 367 115 HOH HOH . E 4 HOH A 103 368 116 HOH HOH . E 4 HOH A 104 369 117 HOH HOH . E 4 HOH A 105 370 118 HOH HOH . E 4 HOH A 106 371 119 HOH HOH . E 4 HOH A 107 372 120 HOH HOH . E 4 HOH A 108 373 121 HOH HOH . E 4 HOH A 109 374 122 HOH HOH . E 4 HOH A 110 375 124 HOH HOH . E 4 HOH A 111 376 125 HOH HOH . E 4 HOH A 112 377 126 HOH HOH . E 4 HOH A 113 378 127 HOH HOH . E 4 HOH A 114 379 128 HOH HOH . E 4 HOH A 115 380 129 HOH HOH . E 4 HOH A 116 381 130 HOH HOH . E 4 HOH A 117 382 131 HOH HOH . E 4 HOH A 118 383 132 HOH HOH . E 4 HOH A 119 384 133 HOH HOH . E 4 HOH A 120 385 134 HOH HOH . E 4 HOH A 121 386 135 HOH HOH . E 4 HOH A 122 387 136 HOH HOH . E 4 HOH A 123 388 137 HOH HOH . E 4 HOH A 124 389 138 HOH HOH . E 4 HOH A 125 390 139 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 2.124 _atom_site.Cartn_y 15.879 _atom_site.Cartn_z 10.723 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.67 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 2 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 95 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #