data_3D27 # _model_server_result.job_id jBg0Gp_nSB5D012RjdCQvw _model_server_result.datetime_utc '2024-11-26 20:58:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d27 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":265}' # _entry.id 3D27 # _exptl.entry_id 3D27 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 220.287 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(3-ethylthiophen-2-yl)benzene-1,2-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.47 _cell.angle_gamma 90 _cell.entry_id 3D27 _cell.length_a 38.51 _cell.length_b 59.88 _cell.length_c 54.88 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D27 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B MN MN . A MN 1 1_555 A OD2 ASP 105 A ASP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc2 B MN MN . A MN 1 1_555 A OE2 GLU 201 A GLU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc3 B MN MN . A MN 1 1_555 A OE2 GLU 232 A GLU 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc4 B MN MN . A MN 1 1_555 D O1 W29 . A W29 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc5 B MN MN . A MN 1 1_555 D O2 W29 . A W29 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc6 C MN MN . A MN 2 1_555 A OD1 ASP 94 A ASP 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc7 C MN MN . A MN 2 1_555 A OD1 ASP 105 A ASP 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc8 C MN MN . A MN 2 1_555 A OE1 GLU 232 A GLU 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc9 C MN MN . A MN 2 1_555 D O2 W29 . A W29 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc10 C MN MN . A MN 2 1_555 E O HOH . A HOH 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? # _chem_comp.formula 'C12 H12 O2 S' _chem_comp.formula_weight 220.287 _chem_comp.id W29 _chem_comp.mon_nstd_flag . _chem_comp.name 4-(3-ethylthiophen-2-yl)benzene-1,2-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 O2 W29 sing 376 n n O2 HO2 W29 sing 377 n n C05 C10 W29 doub 378 n y C10 C06 W29 sing 379 n y O1 C05 W29 sing 380 n n C03 C05 W29 sing 381 n y O1 HO1 W29 sing 382 n n C03 C01 W29 doub 383 n y C03 H03 W29 sing 384 n n C04 C06 W29 doub 385 n y C06 H06 W29 sing 386 n n C01 C04 W29 sing 387 n y C04 H04 W29 sing 388 n n C02 C01 W29 sing 389 n y S C02 W29 sing 390 n y C02 C08 W29 doub 391 n y S C07 W29 sing 392 n y C07 C09 W29 doub 393 n y C07 H07 W29 sing 394 n n C09 C08 W29 sing 395 n y C09 H09 W29 sing 396 n n C08 C11 W29 sing 397 n n C11 C12 W29 sing 398 n n C11 H11 W29 sing 399 n n C11 H11A W29 sing 400 n n C12 H12 W29 sing 401 n n C12 H12A W29 sing 402 n n C12 H12B W29 sing 403 n n # _atom_sites.entry_id 3D27 _atom_sites.fract_transf_matrix[1][1] 0.025967 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007677 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0167 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019001 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 1 1 MN MN . C 2 MN A 1 2 2 MN MN . D 3 W29 A 1 265 1 W29 W29 . E 4 HOH A 1 266 1 HOH HOH . E 4 HOH A 2 267 2 HOH HOH . E 4 HOH A 3 268 3 HOH HOH . E 4 HOH A 4 269 4 HOH HOH . E 4 HOH A 5 270 5 HOH HOH . E 4 HOH A 6 271 6 HOH HOH . E 4 HOH A 7 272 7 HOH HOH . E 4 HOH A 8 273 8 HOH HOH . E 4 HOH A 9 274 9 HOH HOH . E 4 HOH A 10 275 10 HOH HOH . E 4 HOH A 11 276 11 HOH HOH . E 4 HOH A 12 277 12 HOH HOH . E 4 HOH A 13 278 13 HOH HOH . E 4 HOH A 14 279 14 HOH HOH . E 4 HOH A 15 280 15 HOH HOH . E 4 HOH A 16 281 16 HOH HOH . E 4 HOH A 17 282 17 HOH HOH . E 4 HOH A 18 283 18 HOH HOH . E 4 HOH A 19 284 19 HOH HOH . E 4 HOH A 20 285 20 HOH HOH . E 4 HOH A 21 286 21 HOH HOH . E 4 HOH A 22 287 23 HOH HOH . E 4 HOH A 23 288 24 HOH HOH . E 4 HOH A 24 289 25 HOH HOH . E 4 HOH A 25 290 26 HOH HOH . E 4 HOH A 26 291 27 HOH HOH . E 4 HOH A 27 292 28 HOH HOH . E 4 HOH A 28 293 29 HOH HOH . E 4 HOH A 29 294 30 HOH HOH . E 4 HOH A 30 295 31 HOH HOH . E 4 HOH A 31 296 32 HOH HOH . E 4 HOH A 32 297 33 HOH HOH . E 4 HOH A 33 298 34 HOH HOH . E 4 HOH A 34 299 35 HOH HOH . E 4 HOH A 35 300 36 HOH HOH . E 4 HOH A 36 301 37 HOH HOH . E 4 HOH A 37 302 38 HOH HOH . E 4 HOH A 38 303 39 HOH HOH . E 4 HOH A 39 304 40 HOH HOH . E 4 HOH A 40 305 41 HOH HOH . E 4 HOH A 41 306 42 HOH HOH . E 4 HOH A 42 307 44 HOH HOH . E 4 HOH A 43 308 46 HOH HOH . E 4 HOH A 44 309 47 HOH HOH . E 4 HOH A 45 310 48 HOH HOH . E 4 HOH A 46 311 49 HOH HOH . E 4 HOH A 47 312 50 HOH HOH . E 4 HOH A 48 313 51 HOH HOH . E 4 HOH A 49 314 52 HOH HOH . E 4 HOH A 50 315 54 HOH HOH . E 4 HOH A 51 316 55 HOH HOH . E 4 HOH A 52 317 56 HOH HOH . E 4 HOH A 53 318 57 HOH HOH . E 4 HOH A 54 319 58 HOH HOH . E 4 HOH A 55 320 60 HOH HOH . E 4 HOH A 56 321 61 HOH HOH . E 4 HOH A 57 322 62 HOH HOH . E 4 HOH A 58 323 63 HOH HOH . E 4 HOH A 59 324 64 HOH HOH . E 4 HOH A 60 325 65 HOH HOH . E 4 HOH A 61 326 66 HOH HOH . E 4 HOH A 62 327 69 HOH HOH . E 4 HOH A 63 328 70 HOH HOH . E 4 HOH A 64 329 71 HOH HOH . E 4 HOH A 65 330 72 HOH HOH . E 4 HOH A 66 331 73 HOH HOH . E 4 HOH A 67 332 74 HOH HOH . E 4 HOH A 68 333 75 HOH HOH . E 4 HOH A 69 334 76 HOH HOH . E 4 HOH A 70 335 77 HOH HOH . E 4 HOH A 71 336 78 HOH HOH . E 4 HOH A 72 337 79 HOH HOH . E 4 HOH A 73 338 80 HOH HOH . E 4 HOH A 74 339 81 HOH HOH . E 4 HOH A 75 340 82 HOH HOH . E 4 HOH A 76 341 85 HOH HOH . E 4 HOH A 77 342 87 HOH HOH . E 4 HOH A 78 343 88 HOH HOH . E 4 HOH A 79 344 89 HOH HOH . E 4 HOH A 80 345 90 HOH HOH . E 4 HOH A 81 346 91 HOH HOH . E 4 HOH A 82 347 92 HOH HOH . E 4 HOH A 83 348 93 HOH HOH . E 4 HOH A 84 349 94 HOH HOH . E 4 HOH A 85 350 95 HOH HOH . E 4 HOH A 86 351 96 HOH HOH . E 4 HOH A 87 352 97 HOH HOH . E 4 HOH A 88 353 98 HOH HOH . E 4 HOH A 89 354 99 HOH HOH . E 4 HOH A 90 355 100 HOH HOH . E 4 HOH A 91 356 101 HOH HOH . E 4 HOH A 92 357 102 HOH HOH . E 4 HOH A 93 358 103 HOH HOH . E 4 HOH A 94 359 104 HOH HOH . E 4 HOH A 95 360 106 HOH HOH . E 4 HOH A 96 361 107 HOH HOH . E 4 HOH A 97 362 108 HOH HOH . E 4 HOH A 98 363 109 HOH HOH . E 4 HOH A 99 364 112 HOH HOH . E 4 HOH A 100 365 113 HOH HOH . E 4 HOH A 101 366 114 HOH HOH . E 4 HOH A 102 367 115 HOH HOH . E 4 HOH A 103 368 116 HOH HOH . E 4 HOH A 104 369 117 HOH HOH . E 4 HOH A 105 370 118 HOH HOH . E 4 HOH A 106 371 119 HOH HOH . E 4 HOH A 107 372 120 HOH HOH . E 4 HOH A 108 373 121 HOH HOH . E 4 HOH A 109 374 122 HOH HOH . E 4 HOH A 110 375 124 HOH HOH . E 4 HOH A 111 376 125 HOH HOH . E 4 HOH A 112 377 126 HOH HOH . E 4 HOH A 113 378 127 HOH HOH . E 4 HOH A 114 379 128 HOH HOH . E 4 HOH A 115 380 129 HOH HOH . E 4 HOH A 116 381 130 HOH HOH . E 4 HOH A 117 382 131 HOH HOH . E 4 HOH A 118 383 132 HOH HOH . E 4 HOH A 119 384 133 HOH HOH . E 4 HOH A 120 385 134 HOH HOH . E 4 HOH A 121 386 135 HOH HOH . E 4 HOH A 122 387 136 HOH HOH . E 4 HOH A 123 388 137 HOH HOH . E 4 HOH A 124 389 138 HOH HOH . E 4 HOH A 125 390 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 W29 . . . D 3 1.333 14.475 9.517 1 32.93 ? O2 W29 265 A 1 HETATM 2 C C10 W29 . . . D 3 0.01 14.198 9.321 1 33.13 ? C10 W29 265 A 1 HETATM 3 C C05 W29 . . . D 3 -0.43 13.876 8.05 1 32.77 ? C05 W29 265 A 1 HETATM 4 O O1 W29 . . . D 3 0.459 13.844 7.027 1 32.92 ? O1 W29 265 A 1 HETATM 5 C C03 W29 . . . D 3 -1.772 13.585 7.818 1 33 ? C03 W29 265 A 1 HETATM 6 C C06 W29 . . . D 3 -0.901 14.236 10.38 1 33.18 ? C06 W29 265 A 1 HETATM 7 C C04 W29 . . . D 3 -2.248 13.945 10.149 1 33.25 ? C04 W29 265 A 1 HETATM 8 C C01 W29 . . . D 3 -2.69 13.618 8.864 1 33.35 ? C01 W29 265 A 1 HETATM 9 C C02 W29 . . . D 3 -4.131 13.311 8.596 1 33.38 ? C02 W29 265 A 1 HETATM 10 S S W29 . . . D 3 -4.499 11.953 7.587 1 33.89 ? S W29 265 A 1 HETATM 11 C C07 W29 . . . D 3 -6.225 12.126 7.658 1 33.73 ? C07 W29 265 A 1 HETATM 12 C C09 W29 . . . D 3 -6.518 13.235 8.459 1 34.05 ? C09 W29 265 A 1 HETATM 13 C C08 W29 . . . D 3 -5.422 13.934 9.006 1 33.67 ? C08 W29 265 A 1 HETATM 14 C C11 W29 . . . D 3 -5.544 15.153 9.89 1 33.74 ? C11 W29 265 A 1 HETATM 15 C C12 W29 . . . D 3 -5.574 14.708 11.33 1 32.99 ? C12 W29 265 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 39 _model_server_stats.element_count 15 #