data_3D2I
#
_model_server_result.job_id            BYyNIIH-nd1rxIgF2k3w5w 
_model_server_result.datetime_utc      '2025-02-16 12:06:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3d2i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    3D2I 
#
_exptl.entry_id    3D2I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              462.451 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-(5-{2-[(1-methyl-1H-pyrazolo[4,3-d]pyrimidin-7-yl)amino]ethyl}-1,3-thiazol-2-yl)-3-[3-(trifluoromethyl)phenyl]urea 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3D2I 
_cell.length_a            82.92 
_cell.length_b            82.92 
_cell.length_c            171.964 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3D2I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C19 H17 F3 N8 O S' 
_chem_comp.formula_weight    462.451 
_chem_comp.id                AK3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-(5-{2-[(1-methyl-1H-pyrazolo[4,3-d]pyrimidin-7-yl)amino]ethyl}-1,3-thiazol-2-yl)-3-[3-(trifluoromethyl)phenyl]urea 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C31 C15 AK3 sing 1 n y 
C31 N30 AK3 doub 2 n y 
N29 C14 AK3 sing 3 n y 
N29 C32 AK3 sing 4 n n 
N29 N30 AK3 sing 5 n y 
C24 C23 AK3 doub 6 n y 
C24 C19 AK3 sing 7 n y 
C23 C22 AK3 sing 8 n y 
C23 C25 AK3 sing 9 n n 
C22 C21 AK3 doub 10 n y 
C17 N16 AK3 doub 11 n y 
C17 N18 AK3 sing 12 n y 
C20 C21 AK3 sing 13 n y 
C20 C19 AK3 doub 14 n y 
C15 C14 AK3 doub 15 n y 
C15 N16 AK3 sing 16 n y 
C13 C14 AK3 sing 17 n y 
C13 N18 AK3 doub 18 n y 
C13 N1 AK3 sing 19 n n 
C10 N11 AK3 sing 20 n n 
C10 O12 AK3 doub 21 n n 
C10 N9 AK3 sing 22 n n 
C8 N7 AK3 doub 23 n y 
C8 S5 AK3 sing 24 n y 
C8 N9 AK3 sing 25 n n 
C4 C6 AK3 doub 26 n y 
C4 C3 AK3 sing 27 n n 
C4 S5 AK3 sing 28 n y 
C6 N7 AK3 sing 29 n y 
C3 C2 AK3 sing 30 n n 
C2 N1 AK3 sing 31 n n 
F28 C25 AK3 sing 32 n n 
C25 F26 AK3 sing 33 n n 
C25 F27 AK3 sing 34 n n 
C19 N11 AK3 sing 35 n n 
C31 H31 AK3 sing 36 n n 
C24 H24 AK3 sing 37 n n 
C22 H22 AK3 sing 38 n n 
C17 H17 AK3 sing 39 n n 
C20 H20 AK3 sing 40 n n 
C6 H6 AK3 sing 41 n n 
C3 H3 AK3 sing 42 n n 
C3 H3A AK3 sing 43 n n 
C2 H2 AK3 sing 44 n n 
C2 H2A AK3 sing 45 n n 
C32 H32 AK3 sing 46 n n 
C32 H32A AK3 sing 47 n n 
C32 H32B AK3 sing 48 n n 
N1 HN1 AK3 sing 49 n n 
C21 H21 AK3 sing 50 n n 
N11 HN11 AK3 sing 51 n n 
N9 HN9 AK3 sing 52 n n 
#
_atom_sites.entry_id                     3D2I 
_atom_sites.fract_transf_matrix[1][1]    0.01206 
_atom_sites.fract_transf_matrix[1][2]    0.006963 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013925 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005815 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AK3 A 1 1 1 AK3 FRG . 
C 3 HOH A 1 405 1 HOH HOH . 
C 3 HOH A 2 406 2 HOH HOH . 
C 3 HOH A 3 407 3 HOH HOH . 
C 3 HOH A 4 408 4 HOH HOH . 
C 3 HOH A 5 409 5 HOH HOH . 
C 3 HOH A 6 410 6 HOH HOH . 
C 3 HOH A 7 411 7 HOH HOH . 
C 3 HOH A 8 412 8 HOH HOH . 
C 3 HOH A 9 413 9 HOH HOH . 
C 3 HOH A 10 414 10 HOH HOH . 
C 3 HOH A 11 415 11 HOH HOH . 
C 3 HOH A 12 416 12 HOH HOH . 
C 3 HOH A 13 417 13 HOH HOH . 
C 3 HOH A 14 418 14 HOH HOH . 
C 3 HOH A 15 419 15 HOH HOH . 
C 3 HOH A 16 420 16 HOH HOH . 
C 3 HOH A 17 421 17 HOH HOH . 
C 3 HOH A 18 422 18 HOH HOH . 
C 3 HOH A 19 423 19 HOH HOH . 
C 3 HOH A 20 424 20 HOH HOH . 
C 3 HOH A 21 425 21 HOH HOH . 
C 3 HOH A 22 426 22 HOH HOH . 
C 3 HOH A 23 427 23 HOH HOH . 
C 3 HOH A 24 428 25 HOH HOH . 
C 3 HOH A 25 429 26 HOH HOH . 
C 3 HOH A 26 430 27 HOH HOH . 
C 3 HOH A 27 431 29 HOH HOH . 
C 3 HOH A 28 432 31 HOH HOH . 
C 3 HOH A 29 433 32 HOH HOH . 
C 3 HOH A 30 434 33 HOH HOH . 
C 3 HOH A 31 435 34 HOH HOH . 
C 3 HOH A 32 436 35 HOH HOH . 
C 3 HOH A 33 437 36 HOH HOH . 
C 3 HOH A 34 438 37 HOH HOH . 
C 3 HOH A 35 439 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C31 AK3 . . . B 2 3.44 32.905 6.19 1 57.87 ? C31 AK3 1 A 1 
HETATM 2 N N29 AK3 . . . B 2 4.61 31.243 5.299 1 58.36 ? N29 AK3 1 A 1 
HETATM 3 C C24 AK3 . . . B 2 12.703 20.396 8.921 1 64.91 ? C24 AK3 1 A 1 
HETATM 4 C C23 AK3 . . . B 2 13 19.283 8.13 1 67.04 ? C23 AK3 1 A 1 
HETATM 5 C C22 AK3 . . . B 2 12.251 19.012 6.989 1 67.34 ? C22 AK3 1 A 1 
HETATM 6 C C17 AK3 . . . B 2 4.306 31.07 9.438 1 57.92 ? C17 AK3 1 A 1 
HETATM 7 C C20 AK3 . . . B 2 10.912 20.966 7.429 1 66.83 ? C20 AK3 1 A 1 
HETATM 8 C C15 AK3 . . . B 2 3.914 32.066 7.184 1 57.92 ? C15 AK3 1 A 1 
HETATM 9 C C13 AK3 . . . B 2 5.265 29.974 7.464 1 58.86 ? C13 AK3 1 A 1 
HETATM 10 C C14 AK3 . . . B 2 4.637 31.029 6.616 1 58.52 ? C14 AK3 1 A 1 
HETATM 11 C C10 AK3 . . . B 2 10.707 23.406 8.94 1 63.52 ? C10 AK3 1 A 1 
HETATM 12 C C8 AK3 . . . B 2 9.895 25.541 9.574 1 63.59 ? C8 AK3 1 A 1 
HETATM 13 C C4 AK3 . . . B 2 8.736 27.364 8.911 1 63.51 ? C4 AK3 1 A 1 
HETATM 14 C C6 AK3 . . . B 2 9.139 27.56 10.206 1 63.74 ? C6 AK3 1 A 1 
HETATM 15 C C3 AK3 . . . B 2 7.943 28.416 8.158 1 62.52 ? C3 AK3 1 A 1 
HETATM 16 C C2 AK3 . . . B 2 6.625 27.87 7.619 1 58.61 ? C2 AK3 1 A 1 
HETATM 17 F F28 AK3 . . . B 2 13.628 17.29 9.09 1 70.1 ? F28 AK3 1 A 1 
HETATM 18 N N7 AK3 . . . B 2 9.755 26.51 10.459 1 62.92 ? N7 AK3 1 A 1 
HETATM 19 S S5 AK3 . . . B 2 9.182 25.962 8.28 1 63.23 ? S5 AK3 1 A 1 
HETATM 20 C C32 AK3 . . . B 2 5.177 30.553 4.11 1 58.46 ? C32 AK3 1 A 1 
HETATM 21 N N30 AK3 . . . B 2 3.872 32.396 5.009 1 58.07 ? N30 AK3 1 A 1 
HETATM 22 N N16 AK3 . . . B 2 3.772 32.078 8.532 1 57.8 ? N16 AK3 1 A 1 
HETATM 23 N N18 AK3 . . . B 2 5.092 30.038 8.786 1 58.36 ? N18 AK3 1 A 1 
HETATM 24 N N1 AK3 . . . B 2 5.969 28.975 6.926 1 57.44 ? N1 AK3 1 A 1 
HETATM 25 C C25 AK3 . . . B 2 14.122 18.355 8.488 1 68.52 ? C25 AK3 1 A 1 
HETATM 26 F F26 AK3 . . . B 2 14.727 17.98 7.376 1 69.68 ? F26 AK3 1 A 1 
HETATM 27 F F27 AK3 . . . B 2 14.991 18.959 9.285 1 68.19 ? F27 AK3 1 A 1 
HETATM 28 C C21 AK3 . . . B 2 11.208 19.859 6.636 1 68.19 ? C21 AK3 1 A 1 
HETATM 29 C C19 AK3 . . . B 2 11.652 21.244 8.58 1 63.83 ? C19 AK3 1 A 1 
HETATM 30 N N11 AK3 . . . B 2 11.391 22.33 9.356 1 63.32 ? N11 AK3 1 A 1 
HETATM 31 O O12 AK3 . . . B 2 10.237 23.481 7.811 1 63.4 ? O12 AK3 1 A 1 
HETATM 32 N N9 AK3 . . . B 2 10.551 24.4 9.82 1 63.3 ? N9 AK3 1 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           23 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           770 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           32 
#