data_3D2K # _model_server_result.job_id lXvk4fWsnRZoH-PYBfDPtg _model_server_result.datetime_utc '2025-08-31 01:49:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3D2K # _exptl.entry_id 3D2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 472.908 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(7-{[2-(2-{[(3-chlorophenyl)carbamoyl]amino}-1,3-thiazol-5-yl)ethyl]amino}-1H-pyrazolo[4,3-d]pyrimidin-1-yl)acetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3D2K _cell.length_a 83.31 _cell.length_b 83.31 _cell.length_c 77.586 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H17 Cl N8 O3 S' _chem_comp.formula_weight 472.908 _chem_comp.id AK4 _chem_comp.mon_nstd_flag . _chem_comp.name '(7-{[2-(2-{[(3-chlorophenyl)carbamoyl]amino}-1,3-thiazol-5-yl)ethyl]amino}-1H-pyrazolo[4,3-d]pyrimidin-1-yl)acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O31 C30 AK4 doub 1 n n C29 C30 AK4 sing 2 n n C30 O32 AK4 sing 3 n n C15 C28 AK4 sing 4 n y C28 N27 AK4 doub 5 n y C28 H28 AK4 sing 6 n n C24 C19 AK4 doub 7 n y C24 C23 AK4 sing 8 n y C24 H24 AK4 sing 9 n n CL25 C23 AK4 sing 10 n n C23 C22 AK4 doub 11 n y C22 C21 AK4 sing 12 n y C22 H22 AK4 sing 13 n n C17 N18 AK4 doub 14 n y C17 N16 AK4 sing 15 n y C17 H17 AK4 sing 16 n n C19 C20 AK4 sing 17 n y C20 C21 AK4 doub 18 n y C20 H20 AK4 sing 19 n n N16 C15 AK4 doub 20 n y C15 C14 AK4 sing 21 n y N18 C13 AK4 sing 22 n y C13 N1 AK4 sing 23 n n C13 C14 AK4 doub 24 n y C14 N26 AK4 sing 25 n y N9 C10 AK4 sing 26 n n N11 C10 AK4 sing 27 n n C10 O12 AK4 doub 28 n n N7 C8 AK4 doub 29 n y N9 C8 AK4 sing 30 n n C8 S5 AK4 sing 31 n y C6 C4 AK4 doub 32 n y C4 S5 AK4 sing 33 n y C4 C3 AK4 sing 34 n n N7 C6 AK4 sing 35 n y C6 H6 AK4 sing 36 n n C3 C2 AK4 sing 37 n n C3 H3 AK4 sing 38 n n C3 H3A AK4 sing 39 n n C2 N1 AK4 sing 40 n n C2 H2 AK4 sing 41 n n C2 H2A AK4 sing 42 n n O32 HO32 AK4 sing 43 n n N26 C29 AK4 sing 44 n n C29 H29 AK4 sing 45 n n C29 H29A AK4 sing 46 n n N26 N27 AK4 sing 47 n y N1 HN1 AK4 sing 48 n n N9 HN9 AK4 sing 49 n n N11 C19 AK4 sing 50 n n N11 HN11 AK4 sing 51 n n C21 H21 AK4 sing 52 n n # _atom_sites.entry_id 3D2K _atom_sites.fract_transf_matrix[1][1] 0.012003 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012003 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012889 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AK4 A 1 1 1 AK4 FRG . C 3 HOH A 1 405 1 HOH HOH . C 3 HOH A 2 406 2 HOH HOH . C 3 HOH A 3 407 4 HOH HOH . C 3 HOH A 4 408 5 HOH HOH . C 3 HOH A 5 409 6 HOH HOH . C 3 HOH A 6 410 7 HOH HOH . C 3 HOH A 7 411 9 HOH HOH . C 3 HOH A 8 412 10 HOH HOH . C 3 HOH A 9 413 11 HOH HOH . C 3 HOH A 10 414 12 HOH HOH . C 3 HOH A 11 415 13 HOH HOH . C 3 HOH A 12 416 14 HOH HOH . C 3 HOH A 13 417 15 HOH HOH . C 3 HOH A 14 418 16 HOH HOH . C 3 HOH A 15 419 18 HOH HOH . C 3 HOH A 16 420 19 HOH HOH . C 3 HOH A 17 421 20 HOH HOH . C 3 HOH A 18 422 21 HOH HOH . C 3 HOH A 19 423 22 HOH HOH . C 3 HOH A 20 424 24 HOH HOH . C 3 HOH A 21 425 25 HOH HOH . C 3 HOH A 22 426 26 HOH HOH . C 3 HOH A 23 427 27 HOH HOH . C 3 HOH A 24 428 28 HOH HOH . C 3 HOH A 25 429 29 HOH HOH . C 3 HOH A 26 430 31 HOH HOH . C 3 HOH A 27 431 32 HOH HOH . C 3 HOH A 28 432 33 HOH HOH . C 3 HOH A 29 433 34 HOH HOH . C 3 HOH A 30 434 35 HOH HOH . C 3 HOH A 31 435 36 HOH HOH . C 3 HOH A 32 436 37 HOH HOH . C 3 HOH A 33 437 38 HOH HOH . C 3 HOH A 34 438 39 HOH HOH . C 3 HOH A 35 439 40 HOH HOH . C 3 HOH A 36 440 41 HOH HOH . C 3 HOH A 37 441 42 HOH HOH . C 3 HOH A 38 442 43 HOH HOH . C 3 HOH A 39 443 44 HOH HOH . C 3 HOH A 40 444 45 HOH HOH . C 3 HOH A 41 445 46 HOH HOH . C 3 HOH A 42 446 47 HOH HOH . C 3 HOH A 43 447 48 HOH HOH . C 3 HOH A 44 448 50 HOH HOH . C 3 HOH A 45 449 51 HOH HOH . C 3 HOH A 46 450 52 HOH HOH . C 3 HOH A 47 451 53 HOH HOH . C 3 HOH A 48 452 54 HOH HOH . C 3 HOH A 49 453 55 HOH HOH . C 3 HOH A 50 454 56 HOH HOH . C 3 HOH A 51 455 59 HOH HOH . C 3 HOH A 52 456 60 HOH HOH . C 3 HOH A 53 457 61 HOH HOH . C 3 HOH A 54 458 62 HOH HOH . C 3 HOH A 55 459 63 HOH HOH . C 3 HOH A 56 460 64 HOH HOH . C 3 HOH A 57 461 65 HOH HOH . C 3 HOH A 58 462 66 HOH HOH . C 3 HOH A 59 463 67 HOH HOH . C 3 HOH A 60 464 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C30 AK4 . . . B 2 22.68 15.402 25.047 1 23.18 ? C30 AK4 1 A 1 HETATM 2 C C28 AK4 . . . B 2 25.544 17.928 22.405 1 18.97 ? C28 AK4 1 A 1 HETATM 3 C C24 AK4 . . . B 2 16.465 5.382 19.332 1 45.65 ? C24 AK4 1 A 1 HETATM 4 C C23 AK4 . . . B 2 16.018 4.307 20.108 1 47.66 ? C23 AK4 1 A 1 HETATM 5 C C22 AK4 . . . B 2 16.272 4.279 21.476 1 47.95 ? C22 AK4 1 A 1 HETATM 6 C C17 AK4 . . . B 2 24.452 16.192 19.393 1 17.9 ? C17 AK4 1 A 1 HETATM 7 C C20 AK4 . . . B 2 17.419 6.393 21.287 1 47.84 ? C20 AK4 1 A 1 HETATM 8 C C15 AK4 . . . B 2 24.975 17.021 21.483 1 14.23 ? C15 AK4 1 A 1 HETATM 9 C C13 AK4 . . . B 2 23.732 14.986 21.305 1 19.98 ? C13 AK4 1 A 1 HETATM 10 C C14 AK4 . . . B 2 24.351 15.972 22.07 1 15.32 ? C14 AK4 1 A 1 HETATM 11 C C10 AK4 . . . B 2 18.244 8.619 19.523 1 42.81 ? C10 AK4 1 A 1 HETATM 12 C C8 AK4 . . . B 2 19.225 10.703 18.865 1 37.73 ? C8 AK4 1 A 1 HETATM 13 C C4 AK4 . . . B 2 20.347 12.499 19.71 1 28.25 ? C4 AK4 1 A 1 HETATM 14 C C6 AK4 . . . B 2 20.103 12.669 18.394 1 30.36 ? C6 AK4 1 A 1 HETATM 15 C C3 AK4 . . . B 2 21.087 13.491 20.587 1 27.24 ? C3 AK4 1 A 1 HETATM 16 C C2 AK4 . . . B 2 22.417 12.883 21.057 1 18.73 ? C2 AK4 1 A 1 HETATM 17 O O32 AK4 . . . B 2 22.422 15.392 26.28 1 24.26 ? O32 AK4 1 A 1 HETATM 18 O O31 AK4 . . . B 2 21.814 15.299 24.151 1 20.86 ? O31 AK4 1 A 1 HETATM 19 C C29 AK4 . . . B 2 24.129 15.528 24.653 1 18.83 ? C29 AK4 1 A 1 HETATM 20 N N26 AK4 . . . B 2 24.47 16.199 23.385 1 18.88 ? N26 AK4 1 A 1 HETATM 21 N N27 AK4 . . . B 2 25.209 17.372 23.599 1 20.31 ? N27 AK4 1 A 1 HETATM 22 N N18 AK4 . . . B 2 23.813 15.149 19.954 1 18.94 ? N18 AK4 1 A 1 HETATM 23 N N16 AK4 . . . B 2 25.042 17.138 20.141 1 18.73 ? N16 AK4 1 A 1 HETATM 24 N N1 AK4 . . . B 2 23.073 13.917 21.857 1 20.49 ? N1 AK4 1 A 1 HETATM 25 S S5 AK4 . . . B 2 19.8 11.142 20.271 1 28.99 ? S5 AK4 1 A 1 HETATM 26 N N7 AK4 . . . B 2 19.478 11.651 17.953 1 32.65 ? N7 AK4 1 A 1 HETATM 27 N N9 AK4 . . . B 2 18.578 9.545 18.601 1 36.97 ? N9 AK4 1 A 1 HETATM 28 O O12 AK4 . . . B 2 18.5 8.77 20.71 1 43.65 ? O12 AK4 1 A 1 HETATM 29 N N11 AK4 . . . B 2 17.608 7.515 19.101 1 46.56 ? N11 AK4 1 A 1 HETATM 30 C C19 AK4 . . . B 2 17.17 6.438 19.914 1 45.41 ? C19 AK4 1 A 1 HETATM 31 CL CL25 AK4 . . . B 2 15.106 2.949 19.357 1 47.92 ? CL25 AK4 1 A 1 HETATM 32 C C21 AK4 . . . B 2 16.977 5.325 22.065 1 48.67 ? C21 AK4 1 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 615 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 32 #