data_3D3E # _model_server_result.job_id 36fFlBtyUENBftE-k-mBBQ _model_server_result.datetime_utc '2024-10-18 15:23:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":293}' # _entry.id 3D3E # _exptl.entry_id 3D3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 432.479 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-cyclopropyl-N-(trans-4-pyridin-3-ylcyclohexyl)-4-[(1S)-2,2,2-trifluoro-1-hydroxy-1-methylethyl]benzamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.11 _cell.angle_gamma 90 _cell.entry_id 3D3E _cell.length_a 56.7 _cell.length_b 152.846 _cell.length_c 73.708 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C24 H27 F3 N2 O2' _chem_comp.formula_weight 432.479 _chem_comp.id D3E _chem_comp.mon_nstd_flag . _chem_comp.name N-cyclopropyl-N-(trans-4-pyridin-3-ylcyclohexyl)-4-[(1S)-2,2,2-trifluoro-1-hydroxy-1-methylethyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F25 C21 D3E sing 83 n n C21 F23 D3E sing 84 n n C21 F24 D3E sing 85 n n C21 C2 D3E sing 86 n n C2 C1 D3E sing 87 n n C2 O22 D3E sing 88 n n C2 C3 D3E sing 89 n n C3 C8 D3E doub 90 n y C3 C4 D3E sing 91 n y C8 C7 D3E sing 92 n y C7 C6 D3E doub 93 n y C6 C5 D3E sing 94 n y C6 C9 D3E sing 95 n n C5 C4 D3E doub 96 n y C9 O11 D3E doub 97 n n C9 N10 D3E sing 98 n n N10 C12 D3E sing 99 n n N10 C15 D3E sing 100 n n C12 C14 D3E sing 101 n n C12 C13 D3E sing 102 n n C14 C13 D3E sing 103 n n C15 C20 D3E sing 104 n n C15 C16 D3E sing 105 n n C20 C19 D3E sing 106 n n C19 C18 D3E sing 107 n n C18 C17 D3E sing 108 n n C18 C26 D3E sing 109 n n C17 C16 D3E sing 110 n n C26 C31 D3E doub 111 n y C26 C27 D3E sing 112 n y C31 C30 D3E sing 113 n y C30 C29 D3E doub 114 n y C29 N28 D3E sing 115 n y N28 C27 D3E doub 116 n y C1 H1 D3E sing 117 n n C1 H1A D3E sing 118 n n C1 H1B D3E sing 119 n n O22 HO22 D3E sing 120 n n C8 H8 D3E sing 121 n n C7 H7 D3E sing 122 n n C5 H5 D3E sing 123 n n C4 H4 D3E sing 124 n n C12 H12 D3E sing 125 n n C14 H14 D3E sing 126 n n C14 H14A D3E sing 127 n n C13 H13 D3E sing 128 n n C13 H13A D3E sing 129 n n C15 H15 D3E sing 130 n n C20 H20 D3E sing 131 n n C20 H20A D3E sing 132 n n C19 H19 D3E sing 133 n n C19 H19A D3E sing 134 n n C18 H18 D3E sing 135 n n C17 H17 D3E sing 136 n n C17 H17A D3E sing 137 n n C16 H16 D3E sing 138 n n C16 H16A D3E sing 139 n n C31 H31 D3E sing 140 n n C30 H30 D3E sing 141 n n C29 H29 D3E sing 142 n n C27 H27 D3E sing 143 n n # _atom_sites.entry_id 3D3E _atom_sites.fract_transf_matrix[1][1] 0.017637 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00065 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006543 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013576 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAP A 1 1 1 NAP NAP . F 3 D3E A 1 293 293 D3E D3E . G 2 NAP B 1 2 2 NAP NAP . H 3 D3E B 1 293 293 D3E D3E . I 2 NAP C 1 3 3 NAP NAP . J 3 D3E C 1 293 293 D3E D3E . K 2 NAP D 1 4 4 NAP NAP . L 3 D3E D 1 293 293 D3E D3E . M 4 HOH A 1 294 294 HOH HOH . M 4 HOH A 2 295 295 HOH HOH . M 4 HOH A 3 296 296 HOH HOH . M 4 HOH A 4 297 297 HOH HOH . M 4 HOH A 5 298 298 HOH HOH . M 4 HOH A 6 299 299 HOH HOH . M 4 HOH A 7 300 300 HOH HOH . M 4 HOH A 8 301 301 HOH HOH . M 4 HOH A 9 302 302 HOH HOH . M 4 HOH A 10 303 303 HOH HOH . N 4 HOH B 1 294 294 HOH HOH . N 4 HOH B 2 295 295 HOH HOH . N 4 HOH B 3 296 296 HOH HOH . N 4 HOH B 4 297 297 HOH HOH . N 4 HOH B 5 298 298 HOH HOH . N 4 HOH B 6 299 299 HOH HOH . N 4 HOH B 7 300 300 HOH HOH . N 4 HOH B 8 302 302 HOH HOH . N 4 HOH B 9 303 303 HOH HOH . N 4 HOH B 10 304 304 HOH HOH . N 4 HOH B 11 305 305 HOH HOH . N 4 HOH B 12 307 307 HOH HOH . N 4 HOH B 13 308 308 HOH HOH . N 4 HOH B 14 309 309 HOH HOH . N 4 HOH B 15 310 310 HOH HOH . N 4 HOH B 16 311 311 HOH HOH . N 4 HOH B 17 312 312 HOH HOH . N 4 HOH B 18 313 313 HOH HOH . N 4 HOH B 19 314 314 HOH HOH . O 4 HOH C 1 294 294 HOH HOH . O 4 HOH C 2 295 295 HOH HOH . O 4 HOH C 3 296 296 HOH HOH . O 4 HOH C 4 299 299 HOH HOH . O 4 HOH C 5 300 300 HOH HOH . O 4 HOH C 6 301 301 HOH HOH . O 4 HOH C 7 302 302 HOH HOH . O 4 HOH C 8 303 303 HOH HOH . O 4 HOH C 9 304 304 HOH HOH . O 4 HOH C 10 305 305 HOH HOH . O 4 HOH C 11 306 306 HOH HOH . O 4 HOH C 12 307 307 HOH HOH . P 4 HOH D 1 294 294 HOH HOH . P 4 HOH D 2 295 295 HOH HOH . P 4 HOH D 3 296 296 HOH HOH . P 4 HOH D 4 297 297 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F25 D3E . . . F 3 7.589 -4.593 13.98 1 54.65 ? F25 D3E 293 A 1 HETATM 2 C C21 D3E . . . F 3 8.43 -4.565 15.003 1 55.98 ? C21 D3E 293 A 1 HETATM 3 F F23 D3E . . . F 3 9.508 -3.863 14.719 1 56.03 ? F23 D3E 293 A 1 HETATM 4 F F24 D3E . . . F 3 8.845 -5.795 15.245 1 56.79 ? F24 D3E 293 A 1 HETATM 5 C C2 D3E . . . F 3 7.824 -3.908 16.28 1 55.76 ? C2 D3E 293 A 1 HETATM 6 C C1 D3E . . . F 3 6.977 -4.854 17.151 1 55.27 ? C1 D3E 293 A 1 HETATM 7 O O22 D3E . . . F 3 9.01 -3.611 16.979 1 54.55 ? O22 D3E 293 A 1 HETATM 8 C C3 D3E . . . F 3 7.085 -2.608 15.975 1 55.99 ? C3 D3E 293 A 1 HETATM 9 C C8 D3E . . . F 3 5.796 -2.591 15.434 1 56.86 ? C8 D3E 293 A 1 HETATM 10 C C7 D3E . . . F 3 5.139 -1.389 15.166 1 57.19 ? C7 D3E 293 A 1 HETATM 11 C C6 D3E . . . F 3 5.746 -0.163 15.413 1 57.08 ? C6 D3E 293 A 1 HETATM 12 C C5 D3E . . . F 3 7.025 -0.182 15.955 1 56.61 ? C5 D3E 293 A 1 HETATM 13 C C4 D3E . . . F 3 7.682 -1.377 16.23 1 56.14 ? C4 D3E 293 A 1 HETATM 14 C C9 D3E . . . F 3 5.056 1.127 15.162 1 57.07 ? C9 D3E 293 A 1 HETATM 15 O O11 D3E . . . F 3 4.178 1.486 15.94 1 56.73 ? O11 D3E 293 A 1 HETATM 16 N N10 D3E . . . F 3 5.407 1.961 14.103 1 57.01 ? N10 D3E 293 A 1 HETATM 17 C C12 D3E . . . F 3 5.837 3.312 14.41 1 57.05 ? C12 D3E 293 A 1 HETATM 18 C C14 D3E . . . F 3 4.791 4.084 15.163 1 56.84 ? C14 D3E 293 A 1 HETATM 19 C C13 D3E . . . F 3 4.803 4.137 13.692 1 57.17 ? C13 D3E 293 A 1 HETATM 20 C C15 D3E . . . F 3 5.845 1.383 12.799 1 56.4 ? C15 D3E 293 A 1 HETATM 21 C C20 D3E . . . F 3 7.169 2.059 12.381 1 55.99 ? C20 D3E 293 A 1 HETATM 22 C C19 D3E . . . F 3 7.735 1.496 11.074 1 55.85 ? C19 D3E 293 A 1 HETATM 23 C C18 D3E . . . F 3 6.685 1.587 9.967 1 55.72 ? C18 D3E 293 A 1 HETATM 24 C C17 D3E . . . F 3 5.429 0.838 10.409 1 55.66 ? C17 D3E 293 A 1 HETATM 25 C C16 D3E . . . F 3 4.836 1.506 11.651 1 55.82 ? C16 D3E 293 A 1 HETATM 26 C C26 D3E . . . F 3 7.147 1.02 8.656 1 55.82 ? C26 D3E 293 A 1 HETATM 27 C C31 D3E . . . F 3 7.832 -0.182 8.582 1 55.53 ? C31 D3E 293 A 1 HETATM 28 C C30 D3E . . . F 3 8.212 -0.661 7.337 1 55.29 ? C30 D3E 293 A 1 HETATM 29 C C29 D3E . . . F 3 7.878 0.066 6.201 1 54.83 ? C29 D3E 293 A 1 HETATM 30 N N28 D3E . . . F 3 7.207 1.219 6.252 1 55.46 ? N28 D3E 293 A 1 HETATM 31 C C27 D3E . . . F 3 6.849 1.674 7.46 1 55.64 ? C27 D3E 293 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #