data_3D41 # _model_server_result.job_id 3x2UAyBabWYd1cdN5ClmVA _model_server_result.datetime_utc '2025-03-04 08:54:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d41 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":267}' # _entry.id 3D41 # _exptl.entry_id 3D41 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3D41 _cell.length_a 85.656 _cell.length_b 85.656 _cell.length_c 78.979 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D41 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B MG MG . A MG 267 1_555 C O2G ANP . A ANP 1260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc2 B MG MG . A MG 267 1_555 C O2A ANP . A ANP 1260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc3 B MG MG . A MG 267 1_555 C O1B ANP . A ANP 1260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc4 B MG MG . A MG 267 1_555 E O HOH . A HOH 4002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc5 B MG MG . A MG 267 1_555 E O HOH . A HOH 4003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc6 B MG MG . A MG 267 1_555 E O HOH . A HOH 4004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.891 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3D41 _atom_sites.fract_transf_matrix[1][1] 0.011675 _atom_sites.fract_transf_matrix[1][2] 0.00674 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012662 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 267 26 MG MG . C 3 ANP A 1 1260 1260 ANP ANP . D 4 FCN A 1 4001 4001 FCN FCN . E 5 HOH A 1 4002 1 HOH HOH . E 5 HOH A 2 4003 2 HOH HOH . E 5 HOH A 3 4004 3 HOH HOH . E 5 HOH A 4 4005 4 HOH HOH . E 5 HOH A 5 4006 5 HOH HOH . E 5 HOH A 6 4007 6 HOH HOH . E 5 HOH A 7 4008 7 HOH HOH . E 5 HOH A 8 4009 8 HOH HOH . E 5 HOH A 9 4010 9 HOH HOH . E 5 HOH A 10 4011 10 HOH HOH . E 5 HOH A 11 4012 11 HOH HOH . E 5 HOH A 12 4013 12 HOH HOH . E 5 HOH A 13 4014 13 HOH HOH . E 5 HOH A 14 4015 14 HOH HOH . E 5 HOH A 15 4016 15 HOH HOH . E 5 HOH A 16 4017 16 HOH HOH . E 5 HOH A 17 4018 17 HOH HOH . E 5 HOH A 18 4019 18 HOH HOH . E 5 HOH A 19 4020 19 HOH HOH . E 5 HOH A 20 4021 20 HOH HOH . E 5 HOH A 21 4022 21 HOH HOH . E 5 HOH A 22 4023 22 HOH HOH . E 5 HOH A 23 4024 23 HOH HOH . E 5 HOH A 24 4025 24 HOH HOH . E 5 HOH A 25 4026 25 HOH HOH . E 5 HOH A 26 4027 26 HOH HOH . E 5 HOH A 27 4028 27 HOH HOH . E 5 HOH A 28 4029 28 HOH HOH . E 5 HOH A 29 4030 29 HOH HOH . E 5 HOH A 30 4031 30 HOH HOH . E 5 HOH A 31 4032 31 HOH HOH . E 5 HOH A 32 4033 32 HOH HOH . E 5 HOH A 33 4034 33 HOH HOH . E 5 HOH A 34 4035 34 HOH HOH . E 5 HOH A 35 4036 35 HOH HOH . E 5 HOH A 36 4037 36 HOH HOH . E 5 HOH A 37 4038 37 HOH HOH . E 5 HOH A 38 4039 38 HOH HOH . E 5 HOH A 39 4040 39 HOH HOH . E 5 HOH A 40 4041 40 HOH HOH . E 5 HOH A 41 4042 41 HOH HOH . E 5 HOH A 42 4043 42 HOH HOH . E 5 HOH A 43 4044 43 HOH HOH . E 5 HOH A 44 4045 44 HOH HOH . E 5 HOH A 45 4046 45 HOH HOH . E 5 HOH A 46 4047 46 HOH HOH . E 5 HOH A 47 4048 47 HOH HOH . E 5 HOH A 48 4049 48 HOH HOH . E 5 HOH A 49 4050 49 HOH HOH . E 5 HOH A 50 4051 50 HOH HOH . E 5 HOH A 51 4052 51 HOH HOH . E 5 HOH A 52 4053 52 HOH HOH . E 5 HOH A 53 4054 53 HOH HOH . E 5 HOH A 54 4055 54 HOH HOH . E 5 HOH A 55 4056 55 HOH HOH . E 5 HOH A 56 4057 56 HOH HOH . E 5 HOH A 57 4058 57 HOH HOH . E 5 HOH A 58 4059 58 HOH HOH . E 5 HOH A 59 4060 59 HOH HOH . E 5 HOH A 60 4061 60 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 29.826 _atom_site.Cartn_y 9.641 _atom_site.Cartn_z 1.188 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 267 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #