data_3D48
#
_model_server_result.job_id            '_QgZjz0HA5JFwv1ORIRsWg' 
_model_server_result.datetime_utc      '2024-12-26 15:24:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3d48 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":213}' 
#
_entry.id    3D48 
#
_exptl.entry_id    3D48 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              60.009 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CARBONATE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3D48 
_cell.length_a            125.35 
_cell.length_b            125.35 
_cell.length_c            69.82 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3D48 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 47 P CYS 58 1_555 A SG CYS 163 P CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf2 B SG CYS 13 R CYS 12 1_555 B SG CYS 23 R CYS 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
disulf ? disulf3 B SG CYS 52 R CYS 51 1_555 B SG CYS 63 R CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? 
#
_chem_comp.formula           'C O3 -2' 
_chem_comp.formula_weight    60.009 
_chem_comp.id                CO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CARBONATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O1 CO3 doub 70 n n 
C O2 CO3 sing 71 n n 
C O3 CO3 sing 72 n n 
#
_atom_sites.entry_id                     3D48 
_atom_sites.fract_transf_matrix[1][1]    0.00798 
_atom_sites.fract_transf_matrix[1][2]    0.00461 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00921 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01432 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CO3 P 1 1 1 CO3 CO3 . 
D 3 CO3 R 1 211 3 CO3 CO3 . 
E 3 CO3 R 1 212 4 CO3 CO3 . 
F 3 CO3 R 1 213 5 CO3 CO3 . 
G 4 HOH P 1 200 10 HOH HOH . 
G 4 HOH P 2 201 13 HOH HOH . 
G 4 HOH P 3 202 20 HOH HOH . 
G 4 HOH P 4 203 22 HOH HOH . 
G 4 HOH P 5 204 33 HOH HOH . 
G 4 HOH P 6 205 37 HOH HOH . 
G 4 HOH P 7 206 38 HOH HOH . 
G 4 HOH P 8 207 46 HOH HOH . 
G 4 HOH P 9 208 47 HOH HOH . 
G 4 HOH P 10 209 49 HOH HOH . 
G 4 HOH P 11 210 60 HOH HOH . 
G 4 HOH P 12 211 64 HOH HOH . 
G 4 HOH P 13 212 66 HOH HOH . 
G 4 HOH P 14 213 68 HOH HOH . 
G 4 HOH P 15 214 75 HOH HOH . 
G 4 HOH P 16 215 76 HOH HOH . 
G 4 HOH P 17 216 78 HOH HOH . 
G 4 HOH P 18 217 83 HOH HOH . 
G 4 HOH P 19 218 86 HOH HOH . 
G 4 HOH P 20 219 88 HOH HOH . 
G 4 HOH P 21 220 94 HOH HOH . 
G 4 HOH P 22 221 96 HOH HOH . 
G 4 HOH P 23 222 108 HOH HOH . 
G 4 HOH P 24 223 110 HOH HOH . 
G 4 HOH P 25 224 113 HOH HOH . 
G 4 HOH P 26 225 118 HOH HOH . 
G 4 HOH P 27 226 128 HOH HOH . 
G 4 HOH P 28 227 130 HOH HOH . 
H 4 HOH R 1 214 1 HOH HOH . 
H 4 HOH R 2 215 2 HOH HOH . 
H 4 HOH R 3 216 3 HOH HOH . 
H 4 HOH R 4 217 4 HOH HOH . 
H 4 HOH R 5 218 5 HOH HOH . 
H 4 HOH R 6 219 6 HOH HOH . 
H 4 HOH R 7 220 7 HOH HOH . 
H 4 HOH R 8 221 8 HOH HOH . 
H 4 HOH R 9 222 12 HOH HOH . 
H 4 HOH R 10 223 14 HOH HOH . 
H 4 HOH R 11 224 15 HOH HOH . 
H 4 HOH R 12 225 16 HOH HOH . 
H 4 HOH R 13 226 17 HOH HOH . 
H 4 HOH R 14 227 18 HOH HOH . 
H 4 HOH R 15 228 19 HOH HOH . 
H 4 HOH R 16 229 21 HOH HOH . 
H 4 HOH R 17 230 25 HOH HOH . 
H 4 HOH R 18 231 26 HOH HOH . 
H 4 HOH R 19 232 27 HOH HOH . 
H 4 HOH R 20 233 28 HOH HOH . 
H 4 HOH R 21 234 29 HOH HOH . 
H 4 HOH R 22 235 30 HOH HOH . 
H 4 HOH R 23 236 31 HOH HOH . 
H 4 HOH R 24 237 32 HOH HOH . 
H 4 HOH R 25 238 35 HOH HOH . 
H 4 HOH R 26 239 36 HOH HOH . 
H 4 HOH R 27 240 39 HOH HOH . 
H 4 HOH R 28 241 40 HOH HOH . 
H 4 HOH R 29 242 41 HOH HOH . 
H 4 HOH R 30 243 43 HOH HOH . 
H 4 HOH R 31 244 44 HOH HOH . 
H 4 HOH R 32 245 45 HOH HOH . 
H 4 HOH R 33 246 50 HOH HOH . 
H 4 HOH R 34 247 51 HOH HOH . 
H 4 HOH R 35 248 52 HOH HOH . 
H 4 HOH R 36 249 53 HOH HOH . 
H 4 HOH R 37 250 54 HOH HOH . 
H 4 HOH R 38 251 55 HOH HOH . 
H 4 HOH R 39 252 57 HOH HOH . 
H 4 HOH R 40 253 58 HOH HOH . 
H 4 HOH R 41 254 62 HOH HOH . 
H 4 HOH R 42 255 63 HOH HOH . 
H 4 HOH R 43 256 65 HOH HOH . 
H 4 HOH R 44 257 70 HOH HOH . 
H 4 HOH R 45 258 71 HOH HOH . 
H 4 HOH R 46 259 72 HOH HOH . 
H 4 HOH R 47 260 73 HOH HOH . 
H 4 HOH R 48 261 74 HOH HOH . 
H 4 HOH R 49 262 77 HOH HOH . 
H 4 HOH R 50 263 79 HOH HOH . 
H 4 HOH R 51 264 85 HOH HOH . 
H 4 HOH R 52 265 87 HOH HOH . 
H 4 HOH R 53 266 90 HOH HOH . 
H 4 HOH R 54 267 92 HOH HOH . 
H 4 HOH R 55 268 93 HOH HOH . 
H 4 HOH R 56 269 95 HOH HOH . 
H 4 HOH R 57 270 97 HOH HOH . 
H 4 HOH R 58 271 98 HOH HOH . 
H 4 HOH R 59 272 99 HOH HOH . 
H 4 HOH R 60 273 101 HOH HOH . 
H 4 HOH R 61 274 102 HOH HOH . 
H 4 HOH R 62 275 103 HOH HOH . 
H 4 HOH R 63 276 104 HOH HOH . 
H 4 HOH R 64 277 105 HOH HOH . 
H 4 HOH R 65 278 106 HOH HOH . 
H 4 HOH R 66 279 112 HOH HOH . 
H 4 HOH R 67 280 116 HOH HOH . 
H 4 HOH R 68 281 119 HOH HOH . 
H 4 HOH R 69 282 120 HOH HOH . 
H 4 HOH R 70 283 123 HOH HOH . 
H 4 HOH R 71 284 125 HOH HOH . 
H 4 HOH R 72 285 126 HOH HOH . 
H 4 HOH R 73 286 127 HOH HOH . 
H 4 HOH R 74 287 133 HOH HOH . 
H 4 HOH R 75 288 134 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C CO3 . . . F 3 0.081 -24.203 -3.943 1 71.11 ? C CO3 213 R 1 
HETATM 2 O O1 CO3 . . . F 3 -0.154 -24.977 -2.874 1 70.4 ? O1 CO3 213 R 1 
HETATM 3 O O2 CO3 . . . F 3 -0.534 -23.051 -4.12 1 69.81 ? O2 CO3 213 R 1 
HETATM 4 O O3 CO3 . . . F 3 0.951 -24.559 -4.87 1 71.5 ? O3 CO3 213 R 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#