data_3D57
#
_model_server_result.job_id            jpQcu_ioFqQLKKAPFkyerw 
_model_server_result.datetime_utc      '2024-11-16 17:47:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3d57 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":500}' 
#
_entry.id    3D57 
#
_exptl.entry_id    3D57 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              621.932 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.02 
_cell.angle_gamma         90 
_cell.entry_id            3D57 
_cell.length_a            55.557 
_cell.length_b            92.963 
_cell.length_c            58.808 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3D57 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C14 H9 I3 O4' 
_chem_comp.formula_weight    621.932 
_chem_comp.id                4HY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C3 4HY doub 1 n y 
C1 C11 4HY sing 2 n y 
C1 C13 4HY sing 3 n n 
C2 C4 4HY doub 4 n y 
C2 C12 4HY sing 5 n y 
C2 O2 4HY sing 6 n n 
C3 C5 4HY sing 7 n y 
C3 HC31 4HY sing 8 n n 
C4 C6 4HY sing 9 n y 
C4 HC41 4HY sing 10 n n 
C5 C7 4HY doub 11 n y 
C5 I1 4HY sing 12 n n 
C6 C8 4HY doub 13 n y 
C6 I2 4HY sing 14 n n 
C7 C9 4HY sing 15 n y 
C7 O2 4HY sing 16 n n 
C8 C10 4HY sing 17 n y 
C8 O1 4HY sing 18 n n 
C9 C11 4HY doub 19 n y 
C9 I3 4HY sing 20 n n 
C10 C12 4HY doub 21 n y 
C10 H101 4HY sing 22 n n 
C11 H111 4HY sing 23 n n 
C12 H121 4HY sing 24 n n 
C13 C14 4HY sing 25 n n 
C13 H131 4HY sing 26 n n 
C13 H132 4HY sing 27 n n 
C14 O3 4HY doub 28 n n 
C14 O4 4HY sing 29 n n 
O1 HO11 4HY sing 30 n n 
O4 HO41 4HY sing 31 n n 
#
_atom_sites.entry_id                     3D57 
_atom_sites.fract_transf_matrix[1][1]    0.018 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006558 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010757 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018098 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 4HY A 1 500 500 4HY 4HY . 
D 2 4HY B 1 500 500 4HY 4HY . 
E 3 SO4 B 1 501 501 SO4 SO4 . 
F 4 HOH A 1 501 501 HOH HOH . 
F 4 HOH A 2 502 502 HOH HOH . 
F 4 HOH A 3 503 503 HOH HOH . 
F 4 HOH A 4 504 504 HOH HOH . 
F 4 HOH A 5 506 506 HOH HOH . 
F 4 HOH A 6 507 507 HOH HOH . 
F 4 HOH A 7 508 508 HOH HOH . 
F 4 HOH A 8 509 509 HOH HOH . 
F 4 HOH A 9 510 510 HOH HOH . 
F 4 HOH A 10 511 511 HOH HOH . 
F 4 HOH A 11 512 512 HOH HOH . 
F 4 HOH A 12 513 513 HOH HOH . 
F 4 HOH A 13 514 514 HOH HOH . 
F 4 HOH A 14 515 515 HOH HOH . 
F 4 HOH A 15 516 516 HOH HOH . 
F 4 HOH A 16 517 517 HOH HOH . 
F 4 HOH A 17 518 518 HOH HOH . 
F 4 HOH A 18 519 519 HOH HOH . 
F 4 HOH A 19 520 520 HOH HOH . 
F 4 HOH A 20 521 521 HOH HOH . 
F 4 HOH A 21 522 522 HOH HOH . 
F 4 HOH A 22 523 523 HOH HOH . 
F 4 HOH A 23 524 524 HOH HOH . 
F 4 HOH A 24 525 525 HOH HOH . 
F 4 HOH A 25 526 526 HOH HOH . 
F 4 HOH A 26 527 527 HOH HOH . 
F 4 HOH A 27 529 529 HOH HOH . 
F 4 HOH A 28 530 530 HOH HOH . 
F 4 HOH A 29 532 532 HOH HOH . 
F 4 HOH A 30 533 533 HOH HOH . 
F 4 HOH A 31 534 534 HOH HOH . 
F 4 HOH A 32 535 535 HOH HOH . 
F 4 HOH A 33 536 536 HOH HOH . 
F 4 HOH A 34 537 537 HOH HOH . 
F 4 HOH A 35 538 538 HOH HOH . 
F 4 HOH A 36 539 539 HOH HOH . 
F 4 HOH A 37 540 540 HOH HOH . 
F 4 HOH A 38 542 542 HOH HOH . 
F 4 HOH A 39 543 543 HOH HOH . 
F 4 HOH A 40 544 544 HOH HOH . 
F 4 HOH A 41 545 545 HOH HOH . 
F 4 HOH A 42 546 546 HOH HOH . 
F 4 HOH A 43 547 547 HOH HOH . 
F 4 HOH A 44 548 548 HOH HOH . 
F 4 HOH A 45 549 549 HOH HOH . 
F 4 HOH A 46 550 550 HOH HOH . 
F 4 HOH A 47 551 551 HOH HOH . 
F 4 HOH A 48 553 553 HOH HOH . 
F 4 HOH A 49 554 554 HOH HOH . 
F 4 HOH A 50 555 555 HOH HOH . 
F 4 HOH A 51 559 559 HOH HOH . 
F 4 HOH A 52 560 560 HOH HOH . 
F 4 HOH A 53 561 561 HOH HOH . 
F 4 HOH A 54 563 563 HOH HOH . 
F 4 HOH A 55 564 564 HOH HOH . 
G 4 HOH B 1 502 502 HOH HOH . 
G 4 HOH B 2 504 504 HOH HOH . 
G 4 HOH B 3 505 505 HOH HOH . 
G 4 HOH B 4 506 506 HOH HOH . 
G 4 HOH B 5 507 507 HOH HOH . 
G 4 HOH B 6 508 508 HOH HOH . 
G 4 HOH B 7 509 509 HOH HOH . 
G 4 HOH B 8 511 511 HOH HOH . 
G 4 HOH B 9 512 512 HOH HOH . 
G 4 HOH B 10 513 513 HOH HOH . 
G 4 HOH B 11 514 514 HOH HOH . 
G 4 HOH B 12 515 515 HOH HOH . 
G 4 HOH B 13 516 516 HOH HOH . 
G 4 HOH B 14 517 517 HOH HOH . 
G 4 HOH B 15 518 518 HOH HOH . 
G 4 HOH B 16 519 519 HOH HOH . 
G 4 HOH B 17 520 520 HOH HOH . 
G 4 HOH B 18 521 521 HOH HOH . 
G 4 HOH B 19 522 522 HOH HOH . 
G 4 HOH B 20 523 523 HOH HOH . 
G 4 HOH B 21 524 524 HOH HOH . 
G 4 HOH B 22 525 525 HOH HOH . 
G 4 HOH B 23 526 526 HOH HOH . 
G 4 HOH B 24 527 527 HOH HOH . 
G 4 HOH B 25 529 529 HOH HOH . 
G 4 HOH B 26 530 530 HOH HOH . 
G 4 HOH B 27 532 532 HOH HOH . 
G 4 HOH B 28 533 533 HOH HOH . 
G 4 HOH B 29 534 534 HOH HOH . 
G 4 HOH B 30 535 535 HOH HOH . 
G 4 HOH B 31 536 536 HOH HOH . 
G 4 HOH B 32 537 537 HOH HOH . 
G 4 HOH B 33 539 539 HOH HOH . 
G 4 HOH B 34 540 540 HOH HOH . 
G 4 HOH B 35 541 541 HOH HOH . 
G 4 HOH B 36 543 543 HOH HOH . 
G 4 HOH B 37 544 544 HOH HOH . 
G 4 HOH B 38 545 545 HOH HOH . 
G 4 HOH B 39 546 546 HOH HOH . 
G 4 HOH B 40 547 547 HOH HOH . 
G 4 HOH B 41 548 548 HOH HOH . 
G 4 HOH B 42 549 549 HOH HOH . 
G 4 HOH B 43 551 551 HOH HOH . 
G 4 HOH B 44 553 553 HOH HOH . 
G 4 HOH B 45 554 554 HOH HOH . 
G 4 HOH B 46 555 555 HOH HOH . 
G 4 HOH B 47 556 556 HOH HOH . 
G 4 HOH B 48 558 558 HOH HOH . 
G 4 HOH B 49 559 559 HOH HOH . 
G 4 HOH B 50 560 560 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 4HY . . . D 2 17.243 -26.465 34.722 1 18.33 ? C1 4HY 500 B 1 
HETATM 2 C C2 4HY . . . D 2 18.44 -27.896 39.516 1 25.5 ? C2 4HY 500 B 1 
HETATM 3 C C3 4HY . . . D 2 16.203 -26.517 35.755 1 19.27 ? C3 4HY 500 B 1 
HETATM 4 C C4 4HY . . . D 2 18.37 -27.818 40.884 1 25.9 ? C4 4HY 500 B 1 
HETATM 5 C C5 4HY . . . D 2 16.577 -26.562 37.111 1 19.68 ? C5 4HY 500 B 1 
HETATM 6 C C6 4HY . . . D 2 18.514 -28.926 41.676 1 28.64 ? C6 4HY 500 B 1 
HETATM 7 C C7 4HY . . . D 2 17.934 -26.557 37.493 1 20.56 ? C7 4HY 500 B 1 
HETATM 8 C C8 4HY . . . D 2 18.739 -30.202 41.075 1 26.72 ? C8 4HY 500 B 1 
HETATM 9 C C9 4HY . . . D 2 18.961 -26.498 36.461 1 20.52 ? C9 4HY 500 B 1 
HETATM 10 C C10 4HY . . . D 2 18.811 -30.315 39.663 1 27.78 ? C10 4HY 500 B 1 
HETATM 11 C C11 4HY . . . D 2 18.568 -26.451 35.064 1 17.76 ? C11 4HY 500 B 1 
HETATM 12 C C12 4HY . . . D 2 18.661 -29.151 38.872 1 25.82 ? C12 4HY 500 B 1 
HETATM 13 C C13 4HY . . . D 2 16.857 -26.445 33.272 1 18.54 ? C13 4HY 500 B 1 
HETATM 14 C C14 4HY . . . D 2 16.69 -25.022 32.588 1 20.28 ? C14 4HY 500 B 1 
HETATM 15 I I1 4HY . . . D 2 15.076 -26.612 38.639 1 22.68 ? I1 4HY 500 B 1 
HETATM 16 I I2 4HY . . . D 2 18.418 -28.718 43.739 1 32.43 ? I2 4HY 500 B 1 
HETATM 17 I I3 4HY . . . D 2 21.044 -26.472 36.975 1 26.98 ? I3 4HY 500 B 1 
HETATM 18 O O3 4HY . . . D 2 17.335 -24.044 33.059 1 18.23 ? O3 4HY 500 B 1 
HETATM 19 O O2 4HY . . . D 2 18.311 -26.668 38.827 1 24.11 ? O2 4HY 500 B 1 
HETATM 20 O O1 4HY . . . D 2 18.89 -31.321 41.898 1 26.29 ? O1 4HY 500 B 1 
HETATM 21 O O4 4HY . . . D 2 15.918 -24.975 31.606 1 21.63 ? O4 4HY 500 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           21 
#