data_3D5Z
#
_model_server_result.job_id            -jUHsCCs_vnfWlZpP_QoHA 
_model_server_result.datetime_utc      '2024-12-27 00:03:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3d5z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":400}' 
#
_entry.id    3D5Z 
#
_exptl.entry_id    3D5Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3D5Z 
_cell.length_a            84.682 
_cell.length_b            88.831 
_cell.length_c            75.265 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3D5Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 AHR FUB C1 O1 . O5 HO5 . sing 
2 ? 2 3 2 AHR AHR C1 O1 . O5 HO5 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B FUB 1 B 1 FUB A 402 FUB 
2 n B AHR 2 B 2 AHR A 403 AHR 
2 n B AHR 3 B 3 AHR A 404 AHR 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 220 A CYS 221 1_555 A SG CYS 221 A CYS 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
covale ? covale1 B O5 FUB . B FUB 1 1_555 B C1 AHR . B AHR 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? 
covale ? covale2 B O5 AHR . B AHR 2 1_555 B C1 AHR . B AHR 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3D5Z 
_atom_sites.fract_transf_matrix[1][1]    0.011809 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011257 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013286 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CA A 1 400 400 CA CA . 
D 4 HOH A 1 501 501 HOH HOH . 
D 4 HOH A 2 502 502 HOH HOH . 
D 4 HOH A 3 503 503 HOH HOH . 
D 4 HOH A 4 504 504 HOH HOH . 
D 4 HOH A 5 505 505 HOH HOH . 
D 4 HOH A 6 506 506 HOH HOH . 
D 4 HOH A 7 507 507 HOH HOH . 
D 4 HOH A 8 508 508 HOH HOH . 
D 4 HOH A 9 510 510 HOH HOH . 
D 4 HOH A 10 511 511 HOH HOH . 
D 4 HOH A 11 512 512 HOH HOH . 
D 4 HOH A 12 513 513 HOH HOH . 
D 4 HOH A 13 514 514 HOH HOH . 
D 4 HOH A 14 515 515 HOH HOH . 
D 4 HOH A 15 516 516 HOH HOH . 
D 4 HOH A 16 517 517 HOH HOH . 
D 4 HOH A 17 518 518 HOH HOH . 
D 4 HOH A 18 519 519 HOH HOH . 
D 4 HOH A 19 520 520 HOH HOH . 
D 4 HOH A 20 521 521 HOH HOH . 
D 4 HOH A 21 522 522 HOH HOH . 
D 4 HOH A 22 523 523 HOH HOH . 
D 4 HOH A 23 524 524 HOH HOH . 
D 4 HOH A 24 525 525 HOH HOH . 
D 4 HOH A 25 526 526 HOH HOH . 
D 4 HOH A 26 527 527 HOH HOH . 
D 4 HOH A 27 528 528 HOH HOH . 
D 4 HOH A 28 529 529 HOH HOH . 
D 4 HOH A 29 530 530 HOH HOH . 
D 4 HOH A 30 531 531 HOH HOH . 
D 4 HOH A 31 532 532 HOH HOH . 
D 4 HOH A 32 533 533 HOH HOH . 
D 4 HOH A 33 534 534 HOH HOH . 
D 4 HOH A 34 535 535 HOH HOH . 
D 4 HOH A 35 537 537 HOH HOH . 
D 4 HOH A 36 539 539 HOH HOH . 
D 4 HOH A 37 540 540 HOH HOH . 
D 4 HOH A 38 541 541 HOH HOH . 
D 4 HOH A 39 542 542 HOH HOH . 
D 4 HOH A 40 543 543 HOH HOH . 
D 4 HOH A 41 544 544 HOH HOH . 
D 4 HOH A 42 545 545 HOH HOH . 
D 4 HOH A 43 546 546 HOH HOH . 
D 4 HOH A 44 547 547 HOH HOH . 
D 4 HOH A 45 548 548 HOH HOH . 
D 4 HOH A 46 549 549 HOH HOH . 
D 4 HOH A 47 550 550 HOH HOH . 
D 4 HOH A 48 551 551 HOH HOH . 
D 4 HOH A 49 552 552 HOH HOH . 
D 4 HOH A 50 553 553 HOH HOH . 
D 4 HOH A 51 554 554 HOH HOH . 
D 4 HOH A 52 555 555 HOH HOH . 
D 4 HOH A 53 556 556 HOH HOH . 
D 4 HOH A 54 557 557 HOH HOH . 
D 4 HOH A 55 558 558 HOH HOH . 
D 4 HOH A 56 559 559 HOH HOH . 
D 4 HOH A 57 560 560 HOH HOH . 
D 4 HOH A 58 561 561 HOH HOH . 
D 4 HOH A 59 562 562 HOH HOH . 
D 4 HOH A 60 563 563 HOH HOH . 
D 4 HOH A 61 564 564 HOH HOH . 
D 4 HOH A 62 565 565 HOH HOH . 
D 4 HOH A 63 566 566 HOH HOH . 
D 4 HOH A 64 568 568 HOH HOH . 
D 4 HOH A 65 569 569 HOH HOH . 
D 4 HOH A 66 570 570 HOH HOH . 
D 4 HOH A 67 571 571 HOH HOH . 
D 4 HOH A 68 572 572 HOH HOH . 
D 4 HOH A 69 573 573 HOH HOH . 
D 4 HOH A 70 574 574 HOH HOH . 
D 4 HOH A 71 575 575 HOH HOH . 
D 4 HOH A 72 576 576 HOH HOH . 
D 4 HOH A 73 577 577 HOH HOH . 
D 4 HOH A 74 578 578 HOH HOH . 
D 4 HOH A 75 579 579 HOH HOH . 
D 4 HOH A 76 580 580 HOH HOH . 
D 4 HOH A 77 581 581 HOH HOH . 
D 4 HOH A 78 582 582 HOH HOH . 
D 4 HOH A 79 583 583 HOH HOH . 
D 4 HOH A 80 584 584 HOH HOH . 
D 4 HOH A 81 585 585 HOH HOH . 
D 4 HOH A 82 586 586 HOH HOH . 
D 4 HOH A 83 587 587 HOH HOH . 
D 4 HOH A 84 588 588 HOH HOH . 
D 4 HOH A 85 589 589 HOH HOH . 
D 4 HOH A 86 590 590 HOH HOH . 
D 4 HOH A 87 592 592 HOH HOH . 
D 4 HOH A 88 593 593 HOH HOH . 
D 4 HOH A 89 594 594 HOH HOH . 
D 4 HOH A 90 595 595 HOH HOH . 
D 4 HOH A 91 596 596 HOH HOH . 
D 4 HOH A 92 597 597 HOH HOH . 
D 4 HOH A 93 598 598 HOH HOH . 
D 4 HOH A 94 599 599 HOH HOH . 
D 4 HOH A 95 600 600 HOH HOH . 
D 4 HOH A 96 601 601 HOH HOH . 
D 4 HOH A 97 602 602 HOH HOH . 
D 4 HOH A 98 603 603 HOH HOH . 
D 4 HOH A 99 604 604 HOH HOH . 
D 4 HOH A 100 605 605 HOH HOH . 
D 4 HOH A 101 606 606 HOH HOH . 
D 4 HOH A 102 607 607 HOH HOH . 
D 4 HOH A 103 608 608 HOH HOH . 
D 4 HOH A 104 609 609 HOH HOH . 
D 4 HOH A 105 610 610 HOH HOH . 
D 4 HOH A 106 612 612 HOH HOH . 
D 4 HOH A 107 613 613 HOH HOH . 
D 4 HOH A 108 614 614 HOH HOH . 
D 4 HOH A 109 615 615 HOH HOH . 
D 4 HOH A 110 616 616 HOH HOH . 
D 4 HOH A 111 617 617 HOH HOH . 
D 4 HOH A 112 618 618 HOH HOH . 
D 4 HOH A 113 619 619 HOH HOH . 
D 4 HOH A 114 620 620 HOH HOH . 
D 4 HOH A 115 621 621 HOH HOH . 
D 4 HOH A 116 622 622 HOH HOH . 
D 4 HOH A 117 623 623 HOH HOH . 
D 4 HOH A 118 624 624 HOH HOH . 
D 4 HOH A 119 625 625 HOH HOH . 
D 4 HOH A 120 626 626 HOH HOH . 
D 4 HOH A 121 627 627 HOH HOH . 
D 4 HOH A 122 628 628 HOH HOH . 
D 4 HOH A 123 629 629 HOH HOH . 
D 4 HOH A 124 630 630 HOH HOH . 
D 4 HOH A 125 631 631 HOH HOH . 
D 4 HOH A 126 632 632 HOH HOH . 
D 4 HOH A 127 633 633 HOH HOH . 
D 4 HOH A 128 634 634 HOH HOH . 
D 4 HOH A 129 635 635 HOH HOH . 
D 4 HOH A 130 636 636 HOH HOH . 
D 4 HOH A 131 637 637 HOH HOH . 
D 4 HOH A 132 639 639 HOH HOH . 
D 4 HOH A 133 640 640 HOH HOH . 
D 4 HOH A 134 641 641 HOH HOH . 
D 4 HOH A 135 642 642 HOH HOH . 
D 4 HOH A 136 643 643 HOH HOH . 
D 4 HOH A 137 644 644 HOH HOH . 
D 4 HOH A 138 645 645 HOH HOH . 
D 4 HOH A 139 646 646 HOH HOH . 
D 4 HOH A 140 647 647 HOH HOH . 
D 4 HOH A 141 648 648 HOH HOH . 
D 4 HOH A 142 649 649 HOH HOH . 
D 4 HOH A 143 650 650 HOH HOH . 
D 4 HOH A 144 651 651 HOH HOH . 
D 4 HOH A 145 652 652 HOH HOH . 
D 4 HOH A 146 653 653 HOH HOH . 
D 4 HOH A 147 654 654 HOH HOH . 
D 4 HOH A 148 655 655 HOH HOH . 
D 4 HOH A 149 656 656 HOH HOH . 
D 4 HOH A 150 658 658 HOH HOH . 
D 4 HOH A 151 659 659 HOH HOH . 
D 4 HOH A 152 660 660 HOH HOH . 
D 4 HOH A 153 661 661 HOH HOH . 
D 4 HOH A 154 662 662 HOH HOH . 
D 4 HOH A 155 663 663 HOH HOH . 
D 4 HOH A 156 664 664 HOH HOH . 
D 4 HOH A 157 665 665 HOH HOH . 
D 4 HOH A 158 666 666 HOH HOH . 
D 4 HOH A 159 667 667 HOH HOH . 
D 4 HOH A 160 668 668 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -20.269 
_atom_site.Cartn_y               8.1 
_atom_site.Cartn_z               18.016 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        44.57 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           400 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#