data_3D6U # _model_server_result.job_id vFxALpYbwKAZdMM4f6mSQQ _model_server_result.datetime_utc '2024-12-10 17:36:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":315}' # _entry.id 3D6U # _exptl.entry_id 3D6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 275.227 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[3-(TRIFLUOROMETHYL)DIAZIRIDIN-3-YL]-L-PHENYLALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3D6U _cell.length_a 102.779 _cell.length_b 102.779 _cell.length_c 70.78 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_554 y,x,-z-1 0 1 0 1 0 0 0 0 -1 0 0 -70.78 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 190 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 190 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id S2 _struct_conn.ptnr2_label_comp_id BME _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id BME _struct_conn.ptnr2_auth_seq_id 316 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.053 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C11 H12 F3 N3 O2' _chem_comp.formula_weight 275.227 _chem_comp.id T11 _chem_comp.mon_nstd_flag n _chem_comp.name 4-[3-(TRIFLUOROMETHYL)DIAZIRIDIN-3-YL]-L-PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3D6U _atom_sites.fract_transf_matrix[1][1] 0.00973 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00973 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014128 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 T11 A 1 315 308 T11 T11 . C 3 BME A 1 316 309 BME BME . D 4 HOH A 1 317 310 HOH HOH . D 4 HOH A 2 318 311 HOH HOH . D 4 HOH A 3 319 312 HOH HOH . D 4 HOH A 4 320 313 HOH HOH . D 4 HOH A 5 321 314 HOH HOH . D 4 HOH A 6 322 315 HOH HOH . D 4 HOH A 7 323 316 HOH HOH . D 4 HOH A 8 324 317 HOH HOH . D 4 HOH A 9 325 318 HOH HOH . D 4 HOH A 10 326 319 HOH HOH . D 4 HOH A 11 327 320 HOH HOH . D 4 HOH A 12 328 321 HOH HOH . D 4 HOH A 13 329 322 HOH HOH . D 4 HOH A 14 330 323 HOH HOH . D 4 HOH A 15 331 325 HOH HOH . D 4 HOH A 16 332 326 HOH HOH . D 4 HOH A 17 333 327 HOH HOH . D 4 HOH A 18 334 328 HOH HOH . D 4 HOH A 19 335 329 HOH HOH . D 4 HOH A 20 336 330 HOH HOH . D 4 HOH A 21 337 331 HOH HOH . D 4 HOH A 22 338 332 HOH HOH . D 4 HOH A 23 339 333 HOH HOH . D 4 HOH A 24 340 334 HOH HOH . D 4 HOH A 25 341 335 HOH HOH . D 4 HOH A 26 342 336 HOH HOH . D 4 HOH A 27 343 337 HOH HOH . D 4 HOH A 28 344 338 HOH HOH . D 4 HOH A 29 345 339 HOH HOH . D 4 HOH A 30 346 340 HOH HOH . D 4 HOH A 31 347 341 HOH HOH . D 4 HOH A 32 348 342 HOH HOH . D 4 HOH A 33 349 343 HOH HOH . D 4 HOH A 34 350 344 HOH HOH . D 4 HOH A 35 351 345 HOH HOH . D 4 HOH A 36 352 346 HOH HOH . D 4 HOH A 37 353 347 HOH HOH . D 4 HOH A 38 354 348 HOH HOH . D 4 HOH A 39 355 349 HOH HOH . D 4 HOH A 40 356 350 HOH HOH . D 4 HOH A 41 357 351 HOH HOH . D 4 HOH A 42 358 352 HOH HOH . D 4 HOH A 43 359 353 HOH HOH . D 4 HOH A 44 360 354 HOH HOH . D 4 HOH A 45 361 355 HOH HOH . D 4 HOH A 46 362 356 HOH HOH . D 4 HOH A 47 363 357 HOH HOH . D 4 HOH A 48 364 358 HOH HOH . D 4 HOH A 49 365 359 HOH HOH . D 4 HOH A 50 366 360 HOH HOH . D 4 HOH A 51 367 361 HOH HOH . D 4 HOH A 52 368 362 HOH HOH . D 4 HOH A 53 369 363 HOH HOH . D 4 HOH A 54 370 364 HOH HOH . D 4 HOH A 55 371 365 HOH HOH . D 4 HOH A 56 372 366 HOH HOH . D 4 HOH A 57 373 367 HOH HOH . D 4 HOH A 58 374 368 HOH HOH . D 4 HOH A 59 375 369 HOH HOH . D 4 HOH A 60 376 370 HOH HOH . D 4 HOH A 61 377 371 HOH HOH . D 4 HOH A 62 378 372 HOH HOH . D 4 HOH A 63 379 373 HOH HOH . D 4 HOH A 64 380 374 HOH HOH . D 4 HOH A 65 381 375 HOH HOH . D 4 HOH A 66 382 376 HOH HOH . D 4 HOH A 67 383 377 HOH HOH . D 4 HOH A 68 384 378 HOH HOH . D 4 HOH A 69 385 379 HOH HOH . D 4 HOH A 70 386 380 HOH HOH . D 4 HOH A 71 387 381 HOH HOH . D 4 HOH A 72 388 382 HOH HOH . D 4 HOH A 73 389 384 HOH HOH . D 4 HOH A 74 390 385 HOH HOH . D 4 HOH A 75 391 386 HOH HOH . D 4 HOH A 76 392 387 HOH HOH . D 4 HOH A 77 393 388 HOH HOH . D 4 HOH A 78 394 389 HOH HOH . D 4 HOH A 79 395 390 HOH HOH . D 4 HOH A 80 396 391 HOH HOH . D 4 HOH A 81 397 392 HOH HOH . D 4 HOH A 82 398 393 HOH HOH . D 4 HOH A 83 399 394 HOH HOH . D 4 HOH A 84 400 395 HOH HOH . D 4 HOH A 85 401 397 HOH HOH . D 4 HOH A 86 402 398 HOH HOH . D 4 HOH A 87 403 399 HOH HOH . D 4 HOH A 88 404 400 HOH HOH . D 4 HOH A 89 405 401 HOH HOH . D 4 HOH A 90 406 402 HOH HOH . D 4 HOH A 91 407 403 HOH HOH . D 4 HOH A 92 408 404 HOH HOH . D 4 HOH A 93 409 405 HOH HOH . D 4 HOH A 94 410 406 HOH HOH . D 4 HOH A 95 411 408 HOH HOH . D 4 HOH A 96 412 409 HOH HOH . D 4 HOH A 97 413 410 HOH HOH . D 4 HOH A 98 414 411 HOH HOH . D 4 HOH A 99 415 412 HOH HOH . D 4 HOH A 100 416 413 HOH HOH . D 4 HOH A 101 417 414 HOH HOH . D 4 HOH A 102 418 415 HOH HOH . D 4 HOH A 103 419 417 HOH HOH . D 4 HOH A 104 420 418 HOH HOH . D 4 HOH A 105 421 419 HOH HOH . D 4 HOH A 106 422 421 HOH HOH . D 4 HOH A 107 423 422 HOH HOH . D 4 HOH A 108 424 423 HOH HOH . D 4 HOH A 109 425 424 HOH HOH . D 4 HOH A 110 426 425 HOH HOH . D 4 HOH A 111 427 426 HOH HOH . D 4 HOH A 112 428 427 HOH HOH . D 4 HOH A 113 429 429 HOH HOH . D 4 HOH A 114 430 430 HOH HOH . D 4 HOH A 115 431 431 HOH HOH . D 4 HOH A 116 432 432 HOH HOH . D 4 HOH A 117 433 433 HOH HOH . D 4 HOH A 118 434 434 HOH HOH . D 4 HOH A 119 435 435 HOH HOH . D 4 HOH A 120 436 436 HOH HOH . D 4 HOH A 121 437 437 HOH HOH . D 4 HOH A 122 438 438 HOH HOH . D 4 HOH A 123 439 439 HOH HOH . D 4 HOH A 124 440 440 HOH HOH . D 4 HOH A 125 441 441 HOH HOH . D 4 HOH A 126 442 442 HOH HOH . D 4 HOH A 127 443 443 HOH HOH . D 4 HOH A 128 444 444 HOH HOH . D 4 HOH A 129 445 445 HOH HOH . D 4 HOH A 130 446 446 HOH HOH . D 4 HOH A 131 447 448 HOH HOH . D 4 HOH A 132 448 449 HOH HOH . D 4 HOH A 133 449 450 HOH HOH . D 4 HOH A 134 450 452 HOH HOH . D 4 HOH A 135 451 453 HOH HOH . D 4 HOH A 136 452 454 HOH HOH . D 4 HOH A 137 453 455 HOH HOH . D 4 HOH A 138 454 456 HOH HOH . D 4 HOH A 139 455 457 HOH HOH . D 4 HOH A 140 456 458 HOH HOH . D 4 HOH A 141 457 459 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F17 T11 . . . B 2 -4.668 -22.822 -24.421 1 39.24 ? F17 T11 315 A 1 HETATM 2 C C14 T11 . . . B 2 -5.7 -23.146 -23.665 1 37.91 ? C14 T11 315 A 1 HETATM 3 F F15 T11 . . . B 2 -5.511 -24.366 -23.282 1 36.88 ? F15 T11 315 A 1 HETATM 4 F F16 T11 . . . B 2 -5.712 -22.439 -22.56 1 43.22 ? F16 T11 315 A 1 HETATM 5 C C13 T11 . . . B 2 -7.055 -23.146 -24.367 1 30.72 ? C13 T11 315 A 1 HETATM 6 N N19 T11 . . . B 2 -7.09 -23.304 -25.807 1 34.94 ? N19 T11 315 A 1 HETATM 7 N N18 T11 . . . B 2 -7.297 -22.146 -25.383 1 36.1 ? N18 T11 315 A 1 HETATM 8 C C1 T11 . . . B 2 -8.26 -23.094 -23.487 1 29.34 ? C1 T11 315 A 1 HETATM 9 C C6 T11 . . . B 2 -9.12 -21.996 -23.481 1 29.57 ? C6 T11 315 A 1 HETATM 10 C C5 T11 . . . B 2 -10.211 -22.018 -22.598 1 24.53 ? C5 T11 315 A 1 HETATM 11 C C4 T11 . . . B 2 -10.427 -23.128 -21.789 1 26.75 ? C4 T11 315 A 1 HETATM 12 C C3 T11 . . . B 2 -9.564 -24.228 -21.824 1 25.24 ? C3 T11 315 A 1 HETATM 13 C C2 T11 . . . B 2 -8.493 -24.202 -22.686 1 25.11 ? C2 T11 315 A 1 HETATM 14 C C7 T11 . . . B 2 -11.62 -23.161 -20.854 1 24.84 ? C7 T11 315 A 1 HETATM 15 C CA T11 . . . B 2 -12.291 -24.509 -20.856 1 24.78 ? CA T11 315 A 1 HETATM 16 N N T11 . . . B 2 -12.984 -24.829 -22.111 1 22.76 ? N T11 315 A 1 HETATM 17 C C T11 . . . B 2 -13.315 -24.455 -19.761 1 25.47 ? C T11 315 A 1 HETATM 18 O O T11 . . . B 2 -14.332 -25.225 -19.873 1 27.75 ? O T11 315 A 1 HETATM 19 O OXT T11 . . . B 2 -13.125 -23.631 -18.835 1 26.59 ? OXT T11 315 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 19 #