data_3D6V # _model_server_result.job_id 5FAdcSJsEKVQrysAFREXmw _model_server_result.datetime_utc '2024-10-18 23:28:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d6v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 3D6V # _exptl.entry_id 3D6V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.214 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(2,2,2-TRIFLUOROETHYL)-L-PHENYLALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3D6V _cell.length_a 104.155 _cell.length_b 104.155 _cell.length_c 70.826 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D6V _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1 A,B,C,D 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/2 0 -1 0 -1 0 0 0 0 -1 0 0 35.413 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H12 F3 N O2' _chem_comp.formula_weight 247.214 _chem_comp.id TFQ _chem_comp.mon_nstd_flag n _chem_comp.name 4-(2,2,2-TRIFLUOROETHYL)-L-PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F16 C14 TFQ sing 299 n n C14 F15 TFQ sing 300 n n C14 F17 TFQ sing 301 n n C14 C13 TFQ sing 302 n n C13 C1 TFQ sing 303 n n C13 H131 TFQ sing 304 n n C13 H132 TFQ sing 305 n n C1 C2 TFQ doub 306 n y C1 C6 TFQ sing 307 n y C6 C5 TFQ doub 308 n y C6 H6 TFQ sing 309 n n C5 C4 TFQ sing 310 n y C5 H5 TFQ sing 311 n n C2 C3 TFQ sing 312 n y C2 H2 TFQ sing 313 n n C3 C4 TFQ doub 314 n y C3 H3 TFQ sing 315 n n C4 C7 TFQ sing 316 n n C7 C8 TFQ sing 317 n n C7 H71 TFQ sing 318 n n C7 H72 TFQ sing 319 n n C8 C10 TFQ sing 320 n n C8 N9 TFQ sing 321 n n C8 H8 TFQ sing 322 n n N9 HN91 TFQ sing 323 n n N9 HN92 TFQ sing 324 n n C10 O12 TFQ doub 325 n n C10 O11 TFQ sing 326 n n O11 HO11 TFQ sing 327 n n # _atom_sites.entry_id 3D6V _atom_sites.fract_transf_matrix[1][1] 0.009601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TFQ A 1 400 400 TFQ TFQ . C 3 BME A 1 401 401 BME BME . D 4 HOH A 1 402 402 HOH HOH . D 4 HOH A 2 403 403 HOH HOH . D 4 HOH A 3 404 404 HOH HOH . D 4 HOH A 4 405 405 HOH HOH . D 4 HOH A 5 406 406 HOH HOH . D 4 HOH A 6 407 407 HOH HOH . D 4 HOH A 7 408 408 HOH HOH . D 4 HOH A 8 409 409 HOH HOH . D 4 HOH A 9 410 410 HOH HOH . D 4 HOH A 10 411 411 HOH HOH . D 4 HOH A 11 412 412 HOH HOH . D 4 HOH A 12 413 413 HOH HOH . D 4 HOH A 13 414 414 HOH HOH . D 4 HOH A 14 415 415 HOH HOH . D 4 HOH A 15 416 416 HOH HOH . D 4 HOH A 16 417 417 HOH HOH . D 4 HOH A 17 418 418 HOH HOH . D 4 HOH A 18 419 419 HOH HOH . D 4 HOH A 19 420 420 HOH HOH . D 4 HOH A 20 421 421 HOH HOH . D 4 HOH A 21 422 422 HOH HOH . D 4 HOH A 22 423 423 HOH HOH . D 4 HOH A 23 424 424 HOH HOH . D 4 HOH A 24 425 425 HOH HOH . D 4 HOH A 25 426 426 HOH HOH . D 4 HOH A 26 427 427 HOH HOH . D 4 HOH A 27 428 428 HOH HOH . D 4 HOH A 28 429 429 HOH HOH . D 4 HOH A 29 431 431 HOH HOH . D 4 HOH A 30 432 432 HOH HOH . D 4 HOH A 31 433 433 HOH HOH . D 4 HOH A 32 434 434 HOH HOH . D 4 HOH A 33 435 435 HOH HOH . D 4 HOH A 34 436 436 HOH HOH . D 4 HOH A 35 437 437 HOH HOH . D 4 HOH A 36 438 438 HOH HOH . D 4 HOH A 37 439 439 HOH HOH . D 4 HOH A 38 440 440 HOH HOH . D 4 HOH A 39 441 441 HOH HOH . D 4 HOH A 40 442 442 HOH HOH . D 4 HOH A 41 443 443 HOH HOH . D 4 HOH A 42 444 444 HOH HOH . D 4 HOH A 43 445 445 HOH HOH . D 4 HOH A 44 446 446 HOH HOH . D 4 HOH A 45 447 447 HOH HOH . D 4 HOH A 46 448 448 HOH HOH . D 4 HOH A 47 449 449 HOH HOH . D 4 HOH A 48 450 450 HOH HOH . D 4 HOH A 49 451 451 HOH HOH . D 4 HOH A 50 452 452 HOH HOH . D 4 HOH A 51 453 453 HOH HOH . D 4 HOH A 52 454 454 HOH HOH . D 4 HOH A 53 455 455 HOH HOH . D 4 HOH A 54 456 456 HOH HOH . D 4 HOH A 55 457 457 HOH HOH . D 4 HOH A 56 458 458 HOH HOH . D 4 HOH A 57 459 459 HOH HOH . D 4 HOH A 58 460 460 HOH HOH . D 4 HOH A 59 461 461 HOH HOH . D 4 HOH A 60 462 462 HOH HOH . D 4 HOH A 61 463 463 HOH HOH . D 4 HOH A 62 464 464 HOH HOH . D 4 HOH A 63 465 465 HOH HOH . D 4 HOH A 64 466 466 HOH HOH . D 4 HOH A 65 467 467 HOH HOH . D 4 HOH A 66 468 468 HOH HOH . D 4 HOH A 67 469 469 HOH HOH . D 4 HOH A 68 470 470 HOH HOH . D 4 HOH A 69 471 471 HOH HOH . D 4 HOH A 70 472 472 HOH HOH . D 4 HOH A 71 473 473 HOH HOH . D 4 HOH A 72 474 474 HOH HOH . D 4 HOH A 73 475 475 HOH HOH . D 4 HOH A 74 476 476 HOH HOH . D 4 HOH A 75 477 477 HOH HOH . D 4 HOH A 76 478 478 HOH HOH . D 4 HOH A 77 479 479 HOH HOH . D 4 HOH A 78 480 480 HOH HOH . D 4 HOH A 79 481 481 HOH HOH . D 4 HOH A 80 483 483 HOH HOH . D 4 HOH A 81 484 484 HOH HOH . D 4 HOH A 82 485 485 HOH HOH . D 4 HOH A 83 486 486 HOH HOH . D 4 HOH A 84 487 487 HOH HOH . D 4 HOH A 85 488 488 HOH HOH . D 4 HOH A 86 489 489 HOH HOH . D 4 HOH A 87 490 490 HOH HOH . D 4 HOH A 88 491 491 HOH HOH . D 4 HOH A 89 492 492 HOH HOH . D 4 HOH A 90 493 493 HOH HOH . D 4 HOH A 91 494 494 HOH HOH . D 4 HOH A 92 495 495 HOH HOH . D 4 HOH A 93 496 496 HOH HOH . D 4 HOH A 94 497 497 HOH HOH . D 4 HOH A 95 499 499 HOH HOH . D 4 HOH A 96 500 500 HOH HOH . D 4 HOH A 97 501 501 HOH HOH . D 4 HOH A 98 502 502 HOH HOH . D 4 HOH A 99 503 503 HOH HOH . D 4 HOH A 100 504 504 HOH HOH . D 4 HOH A 101 505 505 HOH HOH . D 4 HOH A 102 506 506 HOH HOH . D 4 HOH A 103 507 507 HOH HOH . D 4 HOH A 104 508 508 HOH HOH . D 4 HOH A 105 509 509 HOH HOH . D 4 HOH A 106 510 510 HOH HOH . D 4 HOH A 107 511 511 HOH HOH . D 4 HOH A 108 512 512 HOH HOH . D 4 HOH A 109 513 513 HOH HOH . D 4 HOH A 110 514 514 HOH HOH . D 4 HOH A 111 515 515 HOH HOH . D 4 HOH A 112 516 516 HOH HOH . D 4 HOH A 113 517 517 HOH HOH . D 4 HOH A 114 518 518 HOH HOH . D 4 HOH A 115 519 519 HOH HOH . D 4 HOH A 116 520 520 HOH HOH . D 4 HOH A 117 521 521 HOH HOH . D 4 HOH A 118 522 522 HOH HOH . D 4 HOH A 119 523 523 HOH HOH . D 4 HOH A 120 524 524 HOH HOH . D 4 HOH A 121 525 525 HOH HOH . D 4 HOH A 122 526 526 HOH HOH . D 4 HOH A 123 527 527 HOH HOH . D 4 HOH A 124 528 528 HOH HOH . D 4 HOH A 125 529 529 HOH HOH . D 4 HOH A 126 530 530 HOH HOH . D 4 HOH A 127 531 531 HOH HOH . D 4 HOH A 128 532 532 HOH HOH . D 4 HOH A 129 533 533 HOH HOH . D 4 HOH A 130 534 534 HOH HOH . D 4 HOH A 131 535 535 HOH HOH . D 4 HOH A 132 536 536 HOH HOH . D 4 HOH A 133 537 537 HOH HOH . D 4 HOH A 134 538 538 HOH HOH . D 4 HOH A 135 539 539 HOH HOH . D 4 HOH A 136 540 540 HOH HOH . D 4 HOH A 137 542 542 HOH HOH . D 4 HOH A 138 547 547 HOH HOH . D 4 HOH A 139 548 548 HOH HOH . D 4 HOH A 140 549 549 HOH HOH . D 4 HOH A 141 550 550 HOH HOH . D 4 HOH A 142 551 551 HOH HOH . D 4 HOH A 143 552 552 HOH HOH . D 4 HOH A 144 553 553 HOH HOH . D 4 HOH A 145 554 554 HOH HOH . D 4 HOH A 146 555 555 HOH HOH . D 4 HOH A 147 557 557 HOH HOH . D 4 HOH A 148 558 558 HOH HOH . D 4 HOH A 149 559 559 HOH HOH . D 4 HOH A 150 560 560 HOH HOH . D 4 HOH A 151 561 561 HOH HOH . D 4 HOH A 152 562 562 HOH HOH . D 4 HOH A 153 563 563 HOH HOH . D 4 HOH A 154 564 564 HOH HOH . D 4 HOH A 155 565 565 HOH HOH . D 4 HOH A 156 566 566 HOH HOH . D 4 HOH A 157 571 571 HOH HOH . D 4 HOH A 158 572 572 HOH HOH . D 4 HOH A 159 573 573 HOH HOH . D 4 HOH A 160 574 574 HOH HOH . D 4 HOH A 161 575 575 HOH HOH . D 4 HOH A 162 576 576 HOH HOH . D 4 HOH A 163 577 577 HOH HOH . D 4 HOH A 164 578 578 HOH HOH . D 4 HOH A 165 579 579 HOH HOH . D 4 HOH A 166 581 581 HOH HOH . D 4 HOH A 167 582 582 HOH HOH . D 4 HOH A 168 583 583 HOH HOH . D 4 HOH A 169 584 584 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F16 TFQ . . . B 2 -5.742 22.276 5.581 1 67.06 ? F16 TFQ 400 A 1 HETATM 2 C C14 TFQ . . . B 2 -5.609 23.391 6.24 1 65.92 ? C14 TFQ 400 A 1 HETATM 3 F F17 TFQ . . . B 2 -4.461 23.294 6.888 1 66.87 ? F17 TFQ 400 A 1 HETATM 4 F F15 TFQ . . . B 2 -5.468 24.402 5.376 1 65.85 ? F15 TFQ 400 A 1 HETATM 5 C C13 TFQ . . . B 2 -6.875 23.51 7.142 1 55.17 ? C13 TFQ 400 A 1 HETATM 6 C C1 TFQ . . . B 2 -8.041 23.367 6.188 1 51.72 ? C1 TFQ 400 A 1 HETATM 7 C C6 TFQ . . . B 2 -8.924 22.296 6.227 1 52.91 ? C6 TFQ 400 A 1 HETATM 8 C C5 TFQ . . . B 2 -10.007 22.238 5.289 1 49.14 ? C5 TFQ 400 A 1 HETATM 9 C C2 TFQ . . . B 2 -8.295 24.362 5.221 1 50.42 ? C2 TFQ 400 A 1 HETATM 10 C C3 TFQ . . . B 2 -9.376 24.295 4.311 1 49.96 ? C3 TFQ 400 A 1 HETATM 11 C C4 TFQ . . . B 2 -10.276 23.231 4.348 1 50.27 ? C4 TFQ 400 A 1 HETATM 12 C C7 TFQ . . . B 2 -11.458 23.157 3.329 1 49.54 ? C7 TFQ 400 A 1 HETATM 13 C C8 TFQ . . . B 2 -12.211 24.489 3.132 1 51.1 ? C8 TFQ 400 A 1 HETATM 14 N N9 TFQ . . . B 2 -13.106 24.945 4.243 1 50.29 ? N9 TFQ 400 A 1 HETATM 15 C C10 TFQ . . . B 2 -13.148 24.379 1.985 1 50.54 ? C10 TFQ 400 A 1 HETATM 16 O O12 TFQ . . . B 2 -12.875 23.589 1.062 1 49.98 ? O12 TFQ 400 A 1 HETATM 17 O O11 TFQ . . . B 2 -14.196 25.091 2.057 1 56.24 ? O11 TFQ 400 A 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 17 #