data_3D8Z
#
_model_server_result.job_id            0ys3QZeCYY4oHAUu4YCzow 
_model_server_result.datetime_utc      '2024-12-21 12:39:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3d8z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":125}' 
#
_entry.id    3D8Z 
#
_exptl.entry_id    3D8Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              189.1 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRATE ANION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.51 
_cell.angle_gamma         90 
_cell.entry_id            3D8Z 
_cell.length_a            100.102 
_cell.length_b            32.678 
_cell.length_c            72.562 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3D8Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
disulf ? disulf5 B SG CYS 26 B CYS 26 1_555 B SG CYS 84 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 B SG CYS 40 B CYS 40 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf7 B SG CYS 58 B CYS 58 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
disulf ? disulf8 B SG CYS 65 B CYS 65 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
#
_chem_comp.formula           'C6 H5 O7 -3' 
_chem_comp.formula_weight    189.1 
_chem_comp.id                FLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRATE ANION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAC CA FLC sing 83 n n 
CAC OA1 FLC doub 84 n n 
CAC OA2 FLC sing 85 n n 
CA CB FLC sing 86 n n 
CA HA1 FLC sing 87 n n 
CA HA2 FLC sing 88 n n 
CB CBC FLC sing 89 n n 
CB CG FLC sing 90 n n 
CB OHB FLC sing 91 n n 
CBC OB1 FLC doub 92 n n 
CBC OB2 FLC sing 93 n n 
CG CGC FLC sing 94 n n 
CG HG1 FLC sing 95 n n 
CG HG2 FLC sing 96 n n 
CGC OG1 FLC doub 97 n n 
CGC OG2 FLC sing 98 n n 
OHB HOB FLC sing 99 n n 
#
_atom_sites.entry_id                     3D8Z 
_atom_sites.fract_transf_matrix[1][1]    0.00999 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000088 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.030602 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013782 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TXS A 1 125 1 TXS T4S . 
D 3 FLC B 1 125 1 FLC FLC . 
E 4 HOH A 1 126 8 HOH HOH . 
E 4 HOH A 2 127 11 HOH HOH . 
E 4 HOH A 3 128 12 HOH HOH . 
E 4 HOH A 4 129 13 HOH HOH . 
E 4 HOH A 5 130 14 HOH HOH . 
E 4 HOH A 6 131 18 HOH HOH . 
E 4 HOH A 7 132 19 HOH HOH . 
E 4 HOH A 8 133 21 HOH HOH . 
E 4 HOH A 9 134 22 HOH HOH . 
E 4 HOH A 10 135 23 HOH HOH . 
E 4 HOH A 11 136 24 HOH HOH . 
E 4 HOH A 12 137 25 HOH HOH . 
E 4 HOH A 13 138 31 HOH HOH . 
E 4 HOH A 14 139 32 HOH HOH . 
E 4 HOH A 15 140 37 HOH HOH . 
E 4 HOH A 16 141 46 HOH HOH . 
E 4 HOH A 17 142 47 HOH HOH . 
E 4 HOH A 18 143 49 HOH HOH . 
E 4 HOH A 19 144 53 HOH HOH . 
E 4 HOH A 20 145 54 HOH HOH . 
E 4 HOH A 21 146 56 HOH HOH . 
E 4 HOH A 22 147 61 HOH HOH . 
E 4 HOH A 23 148 62 HOH HOH . 
E 4 HOH A 24 149 64 HOH HOH . 
E 4 HOH A 25 150 65 HOH HOH . 
E 4 HOH A 26 151 67 HOH HOH . 
E 4 HOH A 27 152 71 HOH HOH . 
E 4 HOH A 28 153 73 HOH HOH . 
E 4 HOH A 29 154 74 HOH HOH . 
E 4 HOH A 30 155 76 HOH HOH . 
E 4 HOH A 31 156 77 HOH HOH . 
E 4 HOH A 32 157 78 HOH HOH . 
E 4 HOH A 33 158 80 HOH HOH . 
E 4 HOH A 34 159 81 HOH HOH . 
E 4 HOH A 35 160 84 HOH HOH . 
E 4 HOH A 36 161 85 HOH HOH . 
E 4 HOH A 37 162 89 HOH HOH . 
E 4 HOH A 38 163 92 HOH HOH . 
E 4 HOH A 39 164 93 HOH HOH . 
E 4 HOH A 40 165 96 HOH HOH . 
E 4 HOH A 41 166 97 HOH HOH . 
E 4 HOH A 42 167 98 HOH HOH . 
E 4 HOH A 43 168 101 HOH HOH . 
E 4 HOH A 44 169 107 HOH HOH . 
E 4 HOH A 45 170 109 HOH HOH . 
E 4 HOH A 46 171 110 HOH HOH . 
E 4 HOH A 47 172 111 HOH HOH . 
E 4 HOH A 48 173 112 HOH HOH . 
E 4 HOH A 49 174 113 HOH HOH . 
E 4 HOH A 50 175 121 HOH HOH . 
E 4 HOH A 51 176 122 HOH HOH . 
E 4 HOH A 52 177 123 HOH HOH . 
E 4 HOH A 53 178 125 HOH HOH . 
E 4 HOH A 54 179 126 HOH HOH . 
E 4 HOH A 55 180 127 HOH HOH . 
E 4 HOH A 56 181 128 HOH HOH . 
E 4 HOH A 57 182 129 HOH HOH . 
E 4 HOH A 58 183 130 HOH HOH . 
E 4 HOH A 59 184 131 HOH HOH . 
E 4 HOH A 60 185 132 HOH HOH . 
E 4 HOH A 61 186 133 HOH HOH . 
E 4 HOH A 62 187 134 HOH HOH . 
E 4 HOH A 63 188 135 HOH HOH . 
E 4 HOH A 64 189 136 HOH HOH . 
E 4 HOH A 65 190 137 HOH HOH . 
E 4 HOH A 66 191 138 HOH HOH . 
E 4 HOH A 67 192 139 HOH HOH . 
E 4 HOH A 68 193 140 HOH HOH . 
E 4 HOH A 69 194 156 HOH HOH . 
E 4 HOH A 70 195 158 HOH HOH . 
E 4 HOH A 71 196 159 HOH HOH . 
E 4 HOH A 72 197 163 HOH HOH . 
E 4 HOH A 73 199 166 HOH HOH . 
F 4 HOH B 1 198 164 HOH HOH . 
F 4 HOH B 2 199 1 HOH HOH . 
F 4 HOH B 3 200 2 HOH HOH . 
F 4 HOH B 4 201 3 HOH HOH . 
F 4 HOH B 5 202 4 HOH HOH . 
F 4 HOH B 6 203 5 HOH HOH . 
F 4 HOH B 7 204 6 HOH HOH . 
F 4 HOH B 8 205 7 HOH HOH . 
F 4 HOH B 9 206 9 HOH HOH . 
F 4 HOH B 10 207 10 HOH HOH . 
F 4 HOH B 11 208 15 HOH HOH . 
F 4 HOH B 12 209 16 HOH HOH . 
F 4 HOH B 13 210 17 HOH HOH . 
F 4 HOH B 14 211 20 HOH HOH . 
F 4 HOH B 15 212 26 HOH HOH . 
F 4 HOH B 16 213 27 HOH HOH . 
F 4 HOH B 17 214 28 HOH HOH . 
F 4 HOH B 18 215 29 HOH HOH . 
F 4 HOH B 19 216 30 HOH HOH . 
F 4 HOH B 20 217 33 HOH HOH . 
F 4 HOH B 21 218 34 HOH HOH . 
F 4 HOH B 22 219 35 HOH HOH . 
F 4 HOH B 23 220 36 HOH HOH . 
F 4 HOH B 24 221 38 HOH HOH . 
F 4 HOH B 25 222 39 HOH HOH . 
F 4 HOH B 26 223 40 HOH HOH . 
F 4 HOH B 27 224 41 HOH HOH . 
F 4 HOH B 28 225 42 HOH HOH . 
F 4 HOH B 29 226 43 HOH HOH . 
F 4 HOH B 30 227 44 HOH HOH . 
F 4 HOH B 31 228 45 HOH HOH . 
F 4 HOH B 32 229 48 HOH HOH . 
F 4 HOH B 33 230 50 HOH HOH . 
F 4 HOH B 34 231 51 HOH HOH . 
F 4 HOH B 35 232 52 HOH HOH . 
F 4 HOH B 36 233 55 HOH HOH . 
F 4 HOH B 37 234 57 HOH HOH . 
F 4 HOH B 38 235 58 HOH HOH . 
F 4 HOH B 39 236 59 HOH HOH . 
F 4 HOH B 40 237 60 HOH HOH . 
F 4 HOH B 41 238 63 HOH HOH . 
F 4 HOH B 42 239 66 HOH HOH . 
F 4 HOH B 43 240 68 HOH HOH . 
F 4 HOH B 44 241 69 HOH HOH . 
F 4 HOH B 45 242 70 HOH HOH . 
F 4 HOH B 46 243 72 HOH HOH . 
F 4 HOH B 47 244 75 HOH HOH . 
F 4 HOH B 48 245 79 HOH HOH . 
F 4 HOH B 49 246 82 HOH HOH . 
F 4 HOH B 50 247 83 HOH HOH . 
F 4 HOH B 51 248 86 HOH HOH . 
F 4 HOH B 52 249 87 HOH HOH . 
F 4 HOH B 53 250 88 HOH HOH . 
F 4 HOH B 54 251 90 HOH HOH . 
F 4 HOH B 55 252 91 HOH HOH . 
F 4 HOH B 56 253 94 HOH HOH . 
F 4 HOH B 57 254 95 HOH HOH . 
F 4 HOH B 58 255 99 HOH HOH . 
F 4 HOH B 59 256 100 HOH HOH . 
F 4 HOH B 60 257 102 HOH HOH . 
F 4 HOH B 61 258 103 HOH HOH . 
F 4 HOH B 62 259 104 HOH HOH . 
F 4 HOH B 63 260 105 HOH HOH . 
F 4 HOH B 64 261 106 HOH HOH . 
F 4 HOH B 65 262 108 HOH HOH . 
F 4 HOH B 66 263 114 HOH HOH . 
F 4 HOH B 67 264 115 HOH HOH . 
F 4 HOH B 68 265 116 HOH HOH . 
F 4 HOH B 69 266 117 HOH HOH . 
F 4 HOH B 70 267 118 HOH HOH . 
F 4 HOH B 71 268 119 HOH HOH . 
F 4 HOH B 72 269 120 HOH HOH . 
F 4 HOH B 73 270 124 HOH HOH . 
F 4 HOH B 74 271 141 HOH HOH . 
F 4 HOH B 75 272 142 HOH HOH . 
F 4 HOH B 76 273 143 HOH HOH . 
F 4 HOH B 77 274 144 HOH HOH . 
F 4 HOH B 78 275 145 HOH HOH . 
F 4 HOH B 79 276 146 HOH HOH . 
F 4 HOH B 80 277 147 HOH HOH . 
F 4 HOH B 81 278 148 HOH HOH . 
F 4 HOH B 82 279 149 HOH HOH . 
F 4 HOH B 83 280 150 HOH HOH . 
F 4 HOH B 84 281 151 HOH HOH . 
F 4 HOH B 85 282 152 HOH HOH . 
F 4 HOH B 86 283 153 HOH HOH . 
F 4 HOH B 87 284 154 HOH HOH . 
F 4 HOH B 88 285 155 HOH HOH . 
F 4 HOH B 89 286 157 HOH HOH . 
F 4 HOH B 90 287 160 HOH HOH . 
F 4 HOH B 91 288 161 HOH HOH . 
F 4 HOH B 92 289 162 HOH HOH . 
F 4 HOH B 93 290 165 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAC FLC . . . D 3 4.564 -5.693 34.55 1 76.15 ? CAC FLC 125 B 1 
HETATM 2 C CA FLC . . . D 3 6.054 -5.602 34.306 1 76.16 ? CA FLC 125 B 1 
HETATM 3 C CB FLC . . . D 3 6.564 -6.476 33.156 1 76.24 ? CB FLC 125 B 1 
HETATM 4 C CBC FLC . . . D 3 6.884 -5.837 31.816 1 76.2 ? CBC FLC 125 B 1 
HETATM 5 C CG FLC . . . D 3 7.086 -7.919 33.417 1 76.33 ? CG FLC 125 B 1 
HETATM 6 C CGC FLC . . . D 3 8.539 -8.075 33.844 1 76.5 ? CGC FLC 125 B 1 
HETATM 7 O OA1 FLC . . . D 3 3.983 -4.651 34.926 1 76.06 ? OA1 FLC 125 B 1 
HETATM 8 O OA2 FLC . . . D 3 3.97 -6.783 34.39 1 75.97 ? OA2 FLC 125 B 1 
HETATM 9 O OB1 FLC . . . D 3 7.793 -6.336 31.111 1 76.06 ? OB1 FLC 125 B 1 
HETATM 10 O OB2 FLC . . . D 3 6.222 -4.837 31.456 1 75.66 ? OB2 FLC 125 B 1 
HETATM 11 O OG1 FLC . . . D 3 8.809 -9 34.641 1 76.43 ? OG1 FLC 125 B 1 
HETATM 12 O OG2 FLC . . . D 3 9.424 -7.302 33.406 1 76.47 ? OG2 FLC 125 B 1 
HETATM 13 O OHB FLC . . . D 3 7.818 -5.935 33.599 1 76.42 ? OHB FLC 125 B 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           250 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           13 
#