data_3D94 # _model_server_result.job_id mjGGMPtetqDgrw8xhh6PRQ _model_server_result.datetime_utc '2024-11-04 22:19:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3d94 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":2}' # _entry.id 3D94 # _exptl.entry_id 3D94 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3D94 _cell.length_a 208.182 _cell.length_b 208.182 _cell.length_c 50.853 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3D94 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C CYS 156 A CYS 1111 1_555 A N MHO 157 A MHO 1112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MHO 157 A MHO 1112 1_555 A N VAL 158 A VAL 1113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? metalc ? metalc1 B CA CA . A CA 2 1_555 A OE2 GLU 58 A GLU 1013 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 B CA CA . A CA 2 1_555 A OD1 ASP 174 A ASP 1129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc3 B CA CA . A CA 2 1_555 A OD2 ASP 174 A ASP 1129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc4 B CA CA . A CA 2 1_555 A O TYR 176 A TYR 1131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc5 B CA CA . A CA 2 1_555 D O HOH . A HOH 1366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc6 B CA CA . A CA 2 1_555 D O HOH . A HOH 1373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3D94 _atom_sites.fract_transf_matrix[1][1] 0.004803 _atom_sites.fract_transf_matrix[1][2] 0.002773 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005547 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019665 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 2 2 CA CA . C 3 D94 A 1 1 1 D94 D94 . D 4 HOH A 1 1257 1 HOH HOH . D 4 HOH A 2 1258 2 HOH HOH . D 4 HOH A 3 1259 3 HOH HOH . D 4 HOH A 4 1260 4 HOH HOH . D 4 HOH A 5 1261 5 HOH HOH . D 4 HOH A 6 1262 6 HOH HOH . D 4 HOH A 7 1263 7 HOH HOH . D 4 HOH A 8 1264 8 HOH HOH . D 4 HOH A 9 1265 9 HOH HOH . D 4 HOH A 10 1266 10 HOH HOH . D 4 HOH A 11 1267 11 HOH HOH . D 4 HOH A 12 1268 12 HOH HOH . D 4 HOH A 13 1269 13 HOH HOH . D 4 HOH A 14 1270 14 HOH HOH . D 4 HOH A 15 1271 15 HOH HOH . D 4 HOH A 16 1272 16 HOH HOH . D 4 HOH A 17 1273 17 HOH HOH . D 4 HOH A 18 1274 18 HOH HOH . D 4 HOH A 19 1275 19 HOH HOH . D 4 HOH A 20 1276 20 HOH HOH . D 4 HOH A 21 1277 21 HOH HOH . D 4 HOH A 22 1278 22 HOH HOH . D 4 HOH A 23 1279 23 HOH HOH . D 4 HOH A 24 1280 24 HOH HOH . D 4 HOH A 25 1281 25 HOH HOH . D 4 HOH A 26 1282 26 HOH HOH . D 4 HOH A 27 1283 27 HOH HOH . D 4 HOH A 28 1284 28 HOH HOH . D 4 HOH A 29 1285 29 HOH HOH . D 4 HOH A 30 1286 30 HOH HOH . D 4 HOH A 31 1287 31 HOH HOH . D 4 HOH A 32 1288 32 HOH HOH . D 4 HOH A 33 1289 33 HOH HOH . D 4 HOH A 34 1290 34 HOH HOH . D 4 HOH A 35 1291 35 HOH HOH . D 4 HOH A 36 1292 36 HOH HOH . D 4 HOH A 37 1293 37 HOH HOH . D 4 HOH A 38 1294 38 HOH HOH . D 4 HOH A 39 1295 39 HOH HOH . D 4 HOH A 40 1296 40 HOH HOH . D 4 HOH A 41 1297 41 HOH HOH . D 4 HOH A 42 1298 42 HOH HOH . D 4 HOH A 43 1299 43 HOH HOH . D 4 HOH A 44 1300 44 HOH HOH . D 4 HOH A 45 1301 45 HOH HOH . D 4 HOH A 46 1302 46 HOH HOH . D 4 HOH A 47 1303 47 HOH HOH . D 4 HOH A 48 1304 48 HOH HOH . D 4 HOH A 49 1305 49 HOH HOH . D 4 HOH A 50 1306 50 HOH HOH . D 4 HOH A 51 1307 51 HOH HOH . D 4 HOH A 52 1308 52 HOH HOH . D 4 HOH A 53 1309 53 HOH HOH . D 4 HOH A 54 1310 54 HOH HOH . D 4 HOH A 55 1311 55 HOH HOH . D 4 HOH A 56 1312 56 HOH HOH . D 4 HOH A 57 1313 57 HOH HOH . D 4 HOH A 58 1314 58 HOH HOH . D 4 HOH A 59 1315 59 HOH HOH . D 4 HOH A 60 1316 60 HOH HOH . D 4 HOH A 61 1317 61 HOH HOH . D 4 HOH A 62 1318 62 HOH HOH . D 4 HOH A 63 1319 63 HOH HOH . D 4 HOH A 64 1320 64 HOH HOH . D 4 HOH A 65 1321 65 HOH HOH . D 4 HOH A 66 1322 66 HOH HOH . D 4 HOH A 67 1323 67 HOH HOH . D 4 HOH A 68 1324 68 HOH HOH . D 4 HOH A 69 1325 69 HOH HOH . D 4 HOH A 70 1326 70 HOH HOH . D 4 HOH A 71 1327 71 HOH HOH . D 4 HOH A 72 1328 72 HOH HOH . D 4 HOH A 73 1329 73 HOH HOH . D 4 HOH A 74 1330 74 HOH HOH . D 4 HOH A 75 1331 76 HOH HOH . D 4 HOH A 76 1332 77 HOH HOH . D 4 HOH A 77 1333 78 HOH HOH . D 4 HOH A 78 1334 79 HOH HOH . D 4 HOH A 79 1335 80 HOH HOH . D 4 HOH A 80 1336 81 HOH HOH . D 4 HOH A 81 1337 82 HOH HOH . D 4 HOH A 82 1338 83 HOH HOH . D 4 HOH A 83 1339 84 HOH HOH . D 4 HOH A 84 1340 85 HOH HOH . D 4 HOH A 85 1341 86 HOH HOH . D 4 HOH A 86 1342 87 HOH HOH . D 4 HOH A 87 1343 88 HOH HOH . D 4 HOH A 88 1344 89 HOH HOH . D 4 HOH A 89 1345 90 HOH HOH . D 4 HOH A 90 1346 91 HOH HOH . D 4 HOH A 91 1347 92 HOH HOH . D 4 HOH A 92 1348 93 HOH HOH . D 4 HOH A 93 1349 94 HOH HOH . D 4 HOH A 94 1350 95 HOH HOH . D 4 HOH A 95 1351 96 HOH HOH . D 4 HOH A 96 1352 97 HOH HOH . D 4 HOH A 97 1353 98 HOH HOH . D 4 HOH A 98 1354 99 HOH HOH . D 4 HOH A 99 1355 100 HOH HOH . D 4 HOH A 100 1356 101 HOH HOH . D 4 HOH A 101 1357 102 HOH HOH . D 4 HOH A 102 1358 103 HOH HOH . D 4 HOH A 103 1359 104 HOH HOH . D 4 HOH A 104 1360 105 HOH HOH . D 4 HOH A 105 1361 106 HOH HOH . D 4 HOH A 106 1362 107 HOH HOH . D 4 HOH A 107 1363 108 HOH HOH . D 4 HOH A 108 1364 109 HOH HOH . D 4 HOH A 109 1365 110 HOH HOH . D 4 HOH A 110 1366 111 HOH HOH . D 4 HOH A 111 1367 112 HOH HOH . D 4 HOH A 112 1368 113 HOH HOH . D 4 HOH A 113 1369 114 HOH HOH . D 4 HOH A 114 1370 116 HOH HOH . D 4 HOH A 115 1371 117 HOH HOH . D 4 HOH A 116 1372 118 HOH HOH . D 4 HOH A 117 1373 119 HOH HOH . D 4 HOH A 118 1374 120 HOH HOH . D 4 HOH A 119 1375 121 HOH HOH . D 4 HOH A 120 1376 122 HOH HOH . D 4 HOH A 121 1377 124 HOH HOH . D 4 HOH A 122 1378 125 HOH HOH . D 4 HOH A 123 1379 126 HOH HOH . D 4 HOH A 124 1380 127 HOH HOH . D 4 HOH A 125 1381 128 HOH HOH . D 4 HOH A 126 1382 129 HOH HOH . D 4 HOH A 127 1383 130 HOH HOH . D 4 HOH A 128 1384 131 HOH HOH . D 4 HOH A 129 1385 132 HOH HOH . D 4 HOH A 130 1386 133 HOH HOH . D 4 HOH A 131 1387 134 HOH HOH . D 4 HOH A 132 1388 135 HOH HOH . D 4 HOH A 133 1389 136 HOH HOH . D 4 HOH A 134 1390 137 HOH HOH . D 4 HOH A 135 1391 138 HOH HOH . D 4 HOH A 136 1392 139 HOH HOH . D 4 HOH A 137 1393 140 HOH HOH . D 4 HOH A 138 1394 141 HOH HOH . D 4 HOH A 139 1395 142 HOH HOH . D 4 HOH A 140 1396 143 HOH HOH . D 4 HOH A 141 1397 145 HOH HOH . D 4 HOH A 142 1398 146 HOH HOH . D 4 HOH A 143 1399 149 HOH HOH . D 4 HOH A 144 1400 150 HOH HOH . D 4 HOH A 145 1401 151 HOH HOH . D 4 HOH A 146 1402 152 HOH HOH . D 4 HOH A 147 1403 153 HOH HOH . D 4 HOH A 148 1404 154 HOH HOH . D 4 HOH A 149 1405 155 HOH HOH . D 4 HOH A 150 1406 156 HOH HOH . D 4 HOH A 151 1407 157 HOH HOH . D 4 HOH A 152 1408 158 HOH HOH . D 4 HOH A 153 1409 159 HOH HOH . D 4 HOH A 154 1410 160 HOH HOH . D 4 HOH A 155 1411 161 HOH HOH . D 4 HOH A 156 1412 162 HOH HOH . D 4 HOH A 157 1413 163 HOH HOH . D 4 HOH A 158 1414 164 HOH HOH . D 4 HOH A 159 1415 165 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.831 _atom_site.Cartn_y 30.048 _atom_site.Cartn_z -6.727 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 2 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #