data_3D9P
#
_model_server_result.job_id            u-tqZ-KGcPgdX3DoRsu4fQ 
_model_server_result.datetime_utc      '2024-10-12 19:26:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3d9p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":147}' 
#
_entry.id    3D9P 
#
_exptl.entry_id    3D9P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3D9P 
_cell.length_a            57.52 
_cell.length_b            57.52 
_cell.length_c            106.79 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3D9P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        78 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,D,K,L,M,N,P,R 1 1 
A,C,E,F,G,H,I,J,O,Q 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C TYR 8 Y TYR 1 1_555 C N SEP 9 Y SEP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale2 C C SEP 9 Y SEP 2 1_555 C N PRO 10 Y PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
covale ? covale3 D C TYR 8 Z TYR 1 1_555 D N SEP 9 Z SEP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale4 D C SEP 9 Z SEP 2 1_555 D N PRO 10 Z PRO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? 
covale ? covale5 D C THR 11 Z THR 4 1_555 D N SEP 12 Z SEP 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale6 D C SEP 12 Z SEP 5 1_555 D N PRO 13 Z PRO 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.353 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 308 n n 
S O2 SO4 doub 309 n n 
S O3 SO4 sing 310 n n 
S O4 SO4 sing 311 n n 
#
_atom_sites.entry_id                     3D9P 
_atom_sites.fract_transf_matrix[1][1]    0.017385 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017385 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009364 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 A 1 146 2 SO4 SO4 . 
F 3 SO4 A 1 147 6 SO4 SO4 . 
G 3 SO4 A 1 148 7 SO4 SO4 . 
H 3 SO4 A 1 149 11 SO4 SO4 . 
I 3 SO4 A 1 150 13 SO4 SO4 . 
J 3 SO4 A 1 151 15 SO4 SO4 . 
K 3 SO4 B 1 146 1 SO4 SO4 . 
L 3 SO4 B 1 147 3 SO4 SO4 . 
M 3 SO4 B 1 148 5 SO4 SO4 . 
N 3 SO4 B 1 149 10 SO4 SO4 . 
O 4 HOH A 1 152 2 HOH HOH . 
O 4 HOH A 2 153 3 HOH HOH . 
O 4 HOH A 3 154 11 HOH HOH . 
O 4 HOH A 4 155 14 HOH HOH . 
O 4 HOH A 5 156 15 HOH HOH . 
O 4 HOH A 6 157 17 HOH HOH . 
O 4 HOH A 7 158 21 HOH HOH . 
O 4 HOH A 8 159 22 HOH HOH . 
O 4 HOH A 9 160 29 HOH HOH . 
O 4 HOH A 10 161 32 HOH HOH . 
O 4 HOH A 11 162 42 HOH HOH . 
O 4 HOH A 12 163 44 HOH HOH . 
O 4 HOH A 13 164 45 HOH HOH . 
O 4 HOH A 14 165 47 HOH HOH . 
O 4 HOH A 15 166 48 HOH HOH . 
O 4 HOH A 16 167 49 HOH HOH . 
O 4 HOH A 17 168 50 HOH HOH . 
O 4 HOH A 18 169 57 HOH HOH . 
O 4 HOH A 19 170 58 HOH HOH . 
O 4 HOH A 20 171 59 HOH HOH . 
O 4 HOH A 21 172 60 HOH HOH . 
O 4 HOH A 22 173 63 HOH HOH . 
O 4 HOH A 23 174 70 HOH HOH . 
O 4 HOH A 24 175 72 HOH HOH . 
O 4 HOH A 25 176 73 HOH HOH . 
O 4 HOH A 26 177 82 HOH HOH . 
O 4 HOH A 27 178 84 HOH HOH . 
O 4 HOH A 28 179 87 HOH HOH . 
O 4 HOH A 29 180 88 HOH HOH . 
O 4 HOH A 30 181 91 HOH HOH . 
O 4 HOH A 31 182 99 HOH HOH . 
O 4 HOH A 32 183 103 HOH HOH . 
O 4 HOH A 33 184 104 HOH HOH . 
O 4 HOH A 34 185 116 HOH HOH . 
O 4 HOH A 35 186 120 HOH HOH . 
O 4 HOH A 36 187 122 HOH HOH . 
O 4 HOH A 37 188 125 HOH HOH . 
O 4 HOH A 38 189 126 HOH HOH . 
O 4 HOH A 39 190 127 HOH HOH . 
O 4 HOH A 40 191 128 HOH HOH . 
O 4 HOH A 41 192 129 HOH HOH . 
O 4 HOH A 42 193 152 HOH HOH . 
O 4 HOH A 43 194 154 HOH HOH . 
O 4 HOH A 44 195 157 HOH HOH . 
O 4 HOH A 45 196 160 HOH HOH . 
O 4 HOH A 46 197 163 HOH HOH . 
O 4 HOH A 47 198 165 HOH HOH . 
O 4 HOH A 48 199 171 HOH HOH . 
O 4 HOH A 49 200 175 HOH HOH . 
O 4 HOH A 50 201 176 HOH HOH . 
O 4 HOH A 51 202 180 HOH HOH . 
O 4 HOH A 52 203 205 HOH HOH . 
O 4 HOH A 53 204 209 HOH HOH . 
O 4 HOH A 54 205 213 HOH HOH . 
O 4 HOH A 55 206 227 HOH HOH . 
O 4 HOH A 56 207 228 HOH HOH . 
O 4 HOH A 57 208 229 HOH HOH . 
O 4 HOH A 58 209 230 HOH HOH . 
O 4 HOH A 59 210 232 HOH HOH . 
O 4 HOH A 60 211 233 HOH HOH . 
O 4 HOH A 61 212 234 HOH HOH . 
O 4 HOH A 62 213 235 HOH HOH . 
O 4 HOH A 63 214 236 HOH HOH . 
O 4 HOH A 64 215 237 HOH HOH . 
O 4 HOH A 65 216 238 HOH HOH . 
O 4 HOH A 66 217 258 HOH HOH . 
O 4 HOH A 67 218 261 HOH HOH . 
O 4 HOH A 68 219 270 HOH HOH . 
O 4 HOH A 69 220 278 HOH HOH . 
O 4 HOH A 70 221 286 HOH HOH . 
O 4 HOH A 71 222 290 HOH HOH . 
O 4 HOH A 72 223 308 HOH HOH . 
O 4 HOH A 73 224 315 HOH HOH . 
O 4 HOH A 74 225 324 HOH HOH . 
O 4 HOH A 75 226 336 HOH HOH . 
O 4 HOH A 76 227 352 HOH HOH . 
O 4 HOH A 77 228 360 HOH HOH . 
P 4 HOH B 1 150 4 HOH HOH . 
P 4 HOH B 2 151 5 HOH HOH . 
P 4 HOH B 3 152 6 HOH HOH . 
P 4 HOH B 4 153 7 HOH HOH . 
P 4 HOH B 5 154 8 HOH HOH . 
P 4 HOH B 6 155 9 HOH HOH . 
P 4 HOH B 7 156 10 HOH HOH . 
P 4 HOH B 8 157 16 HOH HOH . 
P 4 HOH B 9 158 19 HOH HOH . 
P 4 HOH B 10 159 20 HOH HOH . 
P 4 HOH B 11 160 23 HOH HOH . 
P 4 HOH B 12 161 24 HOH HOH . 
P 4 HOH B 13 162 25 HOH HOH . 
P 4 HOH B 14 163 26 HOH HOH . 
P 4 HOH B 15 164 27 HOH HOH . 
P 4 HOH B 16 165 30 HOH HOH . 
P 4 HOH B 17 166 31 HOH HOH . 
P 4 HOH B 18 167 33 HOH HOH . 
P 4 HOH B 19 168 34 HOH HOH . 
P 4 HOH B 20 169 37 HOH HOH . 
P 4 HOH B 21 170 39 HOH HOH . 
P 4 HOH B 22 171 40 HOH HOH . 
P 4 HOH B 23 172 41 HOH HOH . 
P 4 HOH B 24 173 51 HOH HOH . 
P 4 HOH B 25 174 66 HOH HOH . 
P 4 HOH B 26 175 67 HOH HOH . 
P 4 HOH B 27 176 68 HOH HOH . 
P 4 HOH B 28 177 71 HOH HOH . 
P 4 HOH B 29 178 75 HOH HOH . 
P 4 HOH B 30 179 76 HOH HOH . 
P 4 HOH B 31 180 77 HOH HOH . 
P 4 HOH B 32 181 78 HOH HOH . 
P 4 HOH B 33 182 86 HOH HOH . 
P 4 HOH B 34 183 90 HOH HOH . 
P 4 HOH B 35 184 94 HOH HOH . 
P 4 HOH B 36 185 100 HOH HOH . 
P 4 HOH B 37 186 101 HOH HOH . 
P 4 HOH B 38 187 102 HOH HOH . 
P 4 HOH B 39 188 109 HOH HOH . 
P 4 HOH B 40 189 110 HOH HOH . 
P 4 HOH B 41 190 111 HOH HOH . 
P 4 HOH B 42 191 112 HOH HOH . 
P 4 HOH B 43 192 115 HOH HOH . 
P 4 HOH B 44 193 117 HOH HOH . 
P 4 HOH B 45 194 133 HOH HOH . 
P 4 HOH B 46 195 134 HOH HOH . 
P 4 HOH B 47 196 136 HOH HOH . 
P 4 HOH B 48 197 137 HOH HOH . 
P 4 HOH B 49 198 138 HOH HOH . 
P 4 HOH B 50 199 139 HOH HOH . 
P 4 HOH B 51 200 141 HOH HOH . 
P 4 HOH B 52 201 142 HOH HOH . 
P 4 HOH B 53 202 143 HOH HOH . 
P 4 HOH B 54 203 146 HOH HOH . 
P 4 HOH B 55 204 151 HOH HOH . 
P 4 HOH B 56 205 161 HOH HOH . 
P 4 HOH B 57 206 167 HOH HOH . 
P 4 HOH B 58 207 172 HOH HOH . 
P 4 HOH B 59 208 182 HOH HOH . 
P 4 HOH B 60 209 197 HOH HOH . 
P 4 HOH B 61 210 217 HOH HOH . 
P 4 HOH B 62 211 218 HOH HOH . 
P 4 HOH B 63 212 221 HOH HOH . 
P 4 HOH B 64 213 222 HOH HOH . 
P 4 HOH B 65 214 223 HOH HOH . 
P 4 HOH B 66 215 240 HOH HOH . 
P 4 HOH B 67 216 241 HOH HOH . 
P 4 HOH B 68 217 242 HOH HOH . 
P 4 HOH B 69 218 243 HOH HOH . 
P 4 HOH B 70 219 244 HOH HOH . 
P 4 HOH B 71 220 245 HOH HOH . 
P 4 HOH B 72 221 246 HOH HOH . 
P 4 HOH B 73 222 247 HOH HOH . 
P 4 HOH B 74 223 248 HOH HOH . 
P 4 HOH B 75 224 249 HOH HOH . 
P 4 HOH B 76 225 250 HOH HOH . 
P 4 HOH B 77 226 251 HOH HOH . 
P 4 HOH B 78 227 252 HOH HOH . 
P 4 HOH B 79 228 253 HOH HOH . 
P 4 HOH B 80 229 254 HOH HOH . 
P 4 HOH B 81 230 263 HOH HOH . 
P 4 HOH B 82 231 273 HOH HOH . 
P 4 HOH B 83 232 303 HOH HOH . 
P 4 HOH B 84 233 314 HOH HOH . 
P 4 HOH B 85 234 321 HOH HOH . 
P 4 HOH B 86 235 323 HOH HOH . 
P 4 HOH B 87 236 332 HOH HOH . 
P 4 HOH B 88 237 346 HOH HOH . 
P 4 HOH B 89 238 361 HOH HOH . 
Q 4 HOH Y 1 74 74 HOH HOH . 
Q 4 HOH Y 2 255 255 HOH HOH . 
R 4 HOH Z 1 81 81 HOH HOH . 
R 4 HOH Z 2 131 131 HOH HOH . 
R 4 HOH Z 3 145 145 HOH HOH . 
R 4 HOH Z 4 342 342 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . F 3 59.456 -1.43 17.99 1 56.28 ? S SO4 147 A 1 
HETATM 2 O O1 SO4 . . . F 3 59.909 -0.844 16.729 1 56.84 ? O1 SO4 147 A 1 
HETATM 3 O O2 SO4 . . . F 3 58.163 -2.094 17.818 1 55.08 ? O2 SO4 147 A 1 
HETATM 4 O O3 SO4 . . . F 3 60.458 -2.406 18.418 1 56.58 ? O3 SO4 147 A 1 
HETATM 5 O O4 SO4 . . . F 3 59.338 -0.376 18.996 1 56.36 ? O4 SO4 147 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#