data_3DAT
#
_model_server_result.job_id            VAsdaRih3UmqA3WF6dbpRA 
_model_server_result.datetime_utc      '2024-11-23 08:55:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dat 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    3DAT 
#
_exptl.entry_id    3DAT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          119.31 
_cell.angle_gamma         90 
_cell.entry_id            3DAT 
_cell.length_a            81.9 
_cell.length_b            43.156 
_cell.length_c            67.87 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DAT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 294 n n 
PA O2A NDP sing 295 n n 
PA O5B NDP sing 296 n n 
PA O3 NDP sing 297 n n 
O2A HOA2 NDP sing 298 n n 
O5B C5B NDP sing 299 n n 
C5B C4B NDP sing 300 n n 
C5B H51A NDP sing 301 n n 
C5B H52A NDP sing 302 n n 
C4B O4B NDP sing 303 n n 
C4B C3B NDP sing 304 n n 
C4B H4B NDP sing 305 n n 
O4B C1B NDP sing 306 n n 
C3B O3B NDP sing 307 n n 
C3B C2B NDP sing 308 n n 
C3B H3B NDP sing 309 n n 
O3B HO3A NDP sing 310 n n 
C2B O2B NDP sing 311 n n 
C2B C1B NDP sing 312 n n 
C2B H2B NDP sing 313 n n 
O2B P2B NDP sing 314 n n 
C1B N9A NDP sing 315 n n 
C1B H1B NDP sing 316 n n 
N9A C8A NDP sing 317 n y 
N9A C4A NDP sing 318 n y 
C8A N7A NDP doub 319 n y 
C8A H8A NDP sing 320 n n 
N7A C5A NDP sing 321 n y 
C5A C6A NDP sing 322 n y 
C5A C4A NDP doub 323 n y 
C6A N6A NDP sing 324 n n 
C6A N1A NDP doub 325 n y 
N6A H61A NDP sing 326 n n 
N6A H62A NDP sing 327 n n 
N1A C2A NDP sing 328 n y 
C2A N3A NDP doub 329 n y 
C2A H2A NDP sing 330 n n 
N3A C4A NDP sing 331 n y 
O3 PN NDP sing 332 n n 
PN O1N NDP doub 333 n n 
PN O2N NDP sing 334 n n 
PN O5D NDP sing 335 n n 
O2N H21N NDP sing 336 n n 
O5D C5D NDP sing 337 n n 
C5D C4D NDP sing 338 n n 
C5D H51N NDP sing 339 n n 
C5D H52N NDP sing 340 n n 
C4D O4D NDP sing 341 n n 
C4D C3D NDP sing 342 n n 
C4D H4D NDP sing 343 n n 
O4D C1D NDP sing 344 n n 
C3D O3D NDP sing 345 n n 
C3D C2D NDP sing 346 n n 
C3D H3D NDP sing 347 n n 
O3D HO3N NDP sing 348 n n 
C2D O2D NDP sing 349 n n 
C2D C1D NDP sing 350 n n 
C2D H2D NDP sing 351 n n 
O2D HO2N NDP sing 352 n n 
C1D N1N NDP sing 353 n n 
C1D H1D NDP sing 354 n n 
N1N C2N NDP sing 355 n n 
N1N C6N NDP sing 356 n n 
C2N C3N NDP doub 357 n n 
C2N H2N NDP sing 358 n n 
C3N C7N NDP sing 359 n n 
C3N C4N NDP sing 360 n n 
C7N O7N NDP doub 361 n n 
C7N N7N NDP sing 362 n n 
N7N H71N NDP sing 363 n n 
N7N H72N NDP sing 364 n n 
C4N C5N NDP sing 365 n n 
C4N H41N NDP sing 366 n n 
C4N H42N NDP sing 367 n n 
C5N C6N NDP doub 368 n n 
C5N H5N NDP sing 369 n n 
C6N H6N NDP sing 370 n n 
P2B O1X NDP doub 371 n n 
P2B O2X NDP sing 372 n n 
P2B O3X NDP sing 373 n n 
O2X HOP2 NDP sing 374 n n 
O3X HOP3 NDP sing 375 n n 
#
_atom_sites.entry_id                     3DAT 
_atom_sites.fract_transf_matrix[1][1]    0.01221 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006854 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023172 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016897 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MTX A 1 201 201 MTX MTX . 
C 3 NDP A 1 202 202 NDP NAP . 
D 4 HOH A 1 203 1 HOH HOH . 
D 4 HOH A 2 204 2 HOH HOH . 
D 4 HOH A 3 205 3 HOH HOH . 
D 4 HOH A 4 206 4 HOH HOH . 
D 4 HOH A 5 207 5 HOH HOH . 
D 4 HOH A 6 208 6 HOH HOH . 
D 4 HOH A 7 209 7 HOH HOH . 
D 4 HOH A 8 210 8 HOH HOH . 
D 4 HOH A 9 211 9 HOH HOH . 
D 4 HOH A 10 212 10 HOH HOH . 
D 4 HOH A 11 213 11 HOH HOH . 
D 4 HOH A 12 214 12 HOH HOH . 
D 4 HOH A 13 215 13 HOH HOH . 
D 4 HOH A 14 216 14 HOH HOH . 
D 4 HOH A 15 217 16 HOH HOH . 
D 4 HOH A 16 218 17 HOH HOH . 
D 4 HOH A 17 219 18 HOH HOH . 
D 4 HOH A 18 220 20 HOH HOH . 
D 4 HOH A 19 221 21 HOH HOH . 
D 4 HOH A 20 222 22 HOH HOH . 
D 4 HOH A 21 223 24 HOH HOH . 
D 4 HOH A 22 224 25 HOH HOH . 
D 4 HOH A 23 225 26 HOH HOH . 
D 4 HOH A 24 226 30 HOH HOH . 
D 4 HOH A 25 227 31 HOH HOH . 
D 4 HOH A 26 228 32 HOH HOH . 
D 4 HOH A 27 229 33 HOH HOH . 
D 4 HOH A 28 230 34 HOH HOH . 
D 4 HOH A 29 231 35 HOH HOH . 
D 4 HOH A 30 232 36 HOH HOH . 
D 4 HOH A 31 233 37 HOH HOH . 
D 4 HOH A 32 234 38 HOH HOH . 
D 4 HOH A 33 235 39 HOH HOH . 
D 4 HOH A 34 236 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . C 3 -16.412 -3.466 12.621 1 28.41 ? PA NDP 202 A 1 
HETATM 2 O O1A NDP . . . C 3 -16.879 -4.883 12.817 1 26.3 ? O1A NDP 202 A 1 
HETATM 3 O O2A NDP . . . C 3 -14.932 -3.362 12.51 1 28.66 ? O2A NDP 202 A 1 
HETATM 4 O O5B NDP . . . C 3 -17.057 -2.957 11.264 1 26.5 ? O5B NDP 202 A 1 
HETATM 5 C C5B NDP . . . C 3 -18.461 -2.903 11.232 1 29.61 ? C5B NDP 202 A 1 
HETATM 6 C C4B NDP . . . C 3 -18.953 -2.724 9.809 1 29.24 ? C4B NDP 202 A 1 
HETATM 7 O O4B NDP . . . C 3 -18.903 -3.951 9.107 1 25.69 ? O4B NDP 202 A 1 
HETATM 8 C C3B NDP . . . C 3 -20.436 -2.372 9.803 1 31 ? C3B NDP 202 A 1 
HETATM 9 O O3B NDP . . . C 3 -20.64 -1.017 10.148 1 34.66 ? O3B NDP 202 A 1 
HETATM 10 C C2B NDP . . . C 3 -20.787 -2.735 8.37 1 31.18 ? C2B NDP 202 A 1 
HETATM 11 O O2B NDP . . . C 3 -20.268 -1.76 7.481 1 35.84 ? O2B NDP 202 A 1 
HETATM 12 C C1B NDP . . . C 3 -19.947 -3.981 8.151 1 29.52 ? C1B NDP 202 A 1 
HETATM 13 N N9A NDP . . . C 3 -20.847 -5.134 8.323 1 28.4 ? N9A NDP 202 A 1 
HETATM 14 C C8A NDP . . . C 3 -21.396 -5.593 9.492 1 28.04 ? C8A NDP 202 A 1 
HETATM 15 N N7A NDP . . . C 3 -22.195 -6.645 9.164 1 30.34 ? N7A NDP 202 A 1 
HETATM 16 C C5A NDP . . . C 3 -22.164 -6.843 7.831 1 29.18 ? C5A NDP 202 A 1 
HETATM 17 C C6A NDP . . . C 3 -22.792 -7.763 6.986 1 30.85 ? C6A NDP 202 A 1 
HETATM 18 N N6A NDP . . . C 3 -23.609 -8.711 7.481 1 30.1 ? N6A NDP 202 A 1 
HETATM 19 N N1A NDP . . . C 3 -22.535 -7.718 5.625 1 29.22 ? N1A NDP 202 A 1 
HETATM 20 C C2A NDP . . . C 3 -21.702 -6.747 5.096 1 29.94 ? C2A NDP 202 A 1 
HETATM 21 N N3A NDP . . . C 3 -21.112 -5.836 5.948 1 28.94 ? N3A NDP 202 A 1 
HETATM 22 C C4A NDP . . . C 3 -21.321 -5.893 7.288 1 27.4 ? C4A NDP 202 A 1 
HETATM 23 O O3 NDP . . . C 3 -17.059 -2.553 13.754 1 29.37 ? O3 NDP 202 A 1 
HETATM 24 P PN NDP . . . C 3 -17.01 -2.571 15.363 1 32.37 ? PN NDP 202 A 1 
HETATM 25 O O1N NDP . . . C 3 -17.786 -3.708 15.863 1 32.85 ? O1N NDP 202 A 1 
HETATM 26 O O2N NDP . . . C 3 -17.389 -1.245 15.815 1 34.31 ? O2N NDP 202 A 1 
HETATM 27 O O5D NDP . . . C 3 -15.463 -2.743 15.693 1 33.43 ? O5D NDP 202 A 1 
HETATM 28 C C5D NDP . . . C 3 -14.615 -1.639 15.467 1 35.62 ? C5D NDP 202 A 1 
HETATM 29 C C4D NDP . . . C 3 -14.011 -1.159 16.786 1 35.55 ? C4D NDP 202 A 1 
HETATM 30 O O4D NDP . . . C 3 -13.247 -2.193 17.37 1 33.39 ? O4D NDP 202 A 1 
HETATM 31 C C3D NDP . . . C 3 -13.042 0.008 16.609 1 36.81 ? C3D NDP 202 A 1 
HETATM 32 O O3D NDP . . . C 3 -12.965 0.706 17.836 1 39.49 ? O3D NDP 202 A 1 
HETATM 33 C C2D NDP . . . C 3 -11.737 -0.71 16.369 1 35.2 ? C2D NDP 202 A 1 
HETATM 34 O O2D NDP . . . C 3 -10.631 0.077 16.711 1 34.95 ? O2D NDP 202 A 1 
HETATM 35 C C1D NDP . . . C 3 -11.872 -1.877 17.334 1 31.98 ? C1D NDP 202 A 1 
HETATM 36 N N1N NDP . . . C 3 -11.05 -3.036 16.95 1 29.42 ? N1N NDP 202 A 1 
HETATM 37 C C2N NDP . . . C 3 -10.089 -3.478 17.822 1 28.33 ? C2N NDP 202 A 1 
HETATM 38 C C3N NDP . . . C 3 -9.292 -4.577 17.494 1 28.09 ? C3N NDP 202 A 1 
HETATM 39 C C7N NDP . . . C 3 -8.366 -5.148 18.499 1 28.12 ? C7N NDP 202 A 1 
HETATM 40 O O7N NDP . . . C 3 -7.742 -6.388 18.245 1 27.04 ? O7N NDP 202 A 1 
HETATM 41 N N7N NDP . . . C 3 -8.2 -4.456 19.638 1 32.2 ? N7N NDP 202 A 1 
HETATM 42 C C4N NDP . . . C 3 -9.479 -5.223 16.286 1 29.87 ? C4N NDP 202 A 1 
HETATM 43 C C5N NDP . . . C 3 -10.459 -4.75 15.408 1 29.87 ? C5N NDP 202 A 1 
HETATM 44 C C6N NDP . . . C 3 -11.246 -3.658 15.753 1 29.19 ? C6N NDP 202 A 1 
HETATM 45 P P2B NDP . . . C 3 -21.215 -0.646 6.783 1 34.91 ? P2B NDP 202 A 1 
HETATM 46 O O1X NDP . . . C 3 -20.353 0.071 5.821 1 29.69 ? O1X NDP 202 A 1 
HETATM 47 O O2X NDP . . . C 3 -22.355 -1.285 6.038 1 34.25 ? O2X NDP 202 A 1 
HETATM 48 O O3X NDP . . . C 3 -21.826 0.148 7.913 1 36.47 ? O3X NDP 202 A 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           474 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           48 
#