data_3DAW # _model_server_result.job_id h-dqv1XjzRNvTFnR3hEJjQ _model_server_result.datetime_utc '2025-04-09 15:25:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3daw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":376}' # _entry.id 3DAW # _exptl.entry_id 3DAW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DAW _cell.length_a 52.78 _cell.length_b 72.99 _cell.length_c 168.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DAW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C CA CA . A CA 376 1_555 D O2G ATP . A ATP 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc2 C CA CA . A CA 376 1_555 D O2B ATP . A ATP 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 C CA CA . A CA 376 1_555 E O HOH . A HOH 384 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc4 C CA CA . A CA 376 1_555 E O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? metalc ? metalc5 C CA CA . A CA 376 1_555 E O HOH . A HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3DAW _atom_sites.fract_transf_matrix[1][1] 0.018947 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013701 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005921 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 376 1 CA CA . D 4 ATP A 1 377 1 ATP ATP . E 5 HOH A 1 378 1 HOH HOH . E 5 HOH A 2 379 2 HOH HOH . E 5 HOH A 3 380 6 HOH HOH . E 5 HOH A 4 381 7 HOH HOH . E 5 HOH A 5 382 8 HOH HOH . E 5 HOH A 6 383 9 HOH HOH . E 5 HOH A 7 384 12 HOH HOH . E 5 HOH A 8 385 17 HOH HOH . E 5 HOH A 9 386 19 HOH HOH . E 5 HOH A 10 387 20 HOH HOH . E 5 HOH A 11 388 21 HOH HOH . E 5 HOH A 12 389 22 HOH HOH . E 5 HOH A 13 390 23 HOH HOH . E 5 HOH A 14 391 24 HOH HOH . E 5 HOH A 15 392 25 HOH HOH . E 5 HOH A 16 393 26 HOH HOH . E 5 HOH A 17 394 27 HOH HOH . E 5 HOH A 18 395 29 HOH HOH . E 5 HOH A 19 396 30 HOH HOH . E 5 HOH A 20 397 31 HOH HOH . E 5 HOH A 21 398 33 HOH HOH . E 5 HOH A 22 399 34 HOH HOH . E 5 HOH A 23 400 36 HOH HOH . E 5 HOH A 24 401 39 HOH HOH . E 5 HOH A 25 402 40 HOH HOH . E 5 HOH A 26 403 41 HOH HOH . E 5 HOH A 27 404 42 HOH HOH . E 5 HOH A 28 405 44 HOH HOH . E 5 HOH A 29 406 45 HOH HOH . E 5 HOH A 30 407 46 HOH HOH . E 5 HOH A 31 408 47 HOH HOH . E 5 HOH A 32 409 49 HOH HOH . E 5 HOH A 33 410 51 HOH HOH . E 5 HOH A 34 411 52 HOH HOH . E 5 HOH A 35 412 53 HOH HOH . E 5 HOH A 36 413 54 HOH HOH . E 5 HOH A 37 414 55 HOH HOH . E 5 HOH A 38 415 58 HOH HOH . E 5 HOH A 39 416 64 HOH HOH . E 5 HOH A 40 417 66 HOH HOH . E 5 HOH A 41 418 67 HOH HOH . E 5 HOH A 42 419 68 HOH HOH . E 5 HOH A 43 420 69 HOH HOH . E 5 HOH A 44 421 71 HOH HOH . E 5 HOH A 45 422 73 HOH HOH . E 5 HOH A 46 423 77 HOH HOH . E 5 HOH A 47 424 78 HOH HOH . E 5 HOH A 48 425 82 HOH HOH . E 5 HOH A 49 426 83 HOH HOH . E 5 HOH A 50 427 85 HOH HOH . E 5 HOH A 51 428 87 HOH HOH . E 5 HOH A 52 429 88 HOH HOH . E 5 HOH A 53 430 90 HOH HOH . E 5 HOH A 54 431 91 HOH HOH . E 5 HOH A 55 432 92 HOH HOH . E 5 HOH A 56 433 93 HOH HOH . E 5 HOH A 57 434 94 HOH HOH . E 5 HOH A 58 436 96 HOH HOH . E 5 HOH A 59 437 97 HOH HOH . E 5 HOH A 60 438 100 HOH HOH . E 5 HOH A 61 439 103 HOH HOH . E 5 HOH A 62 440 105 HOH HOH . E 5 HOH A 63 441 107 HOH HOH . E 5 HOH A 64 442 108 HOH HOH . E 5 HOH A 65 443 109 HOH HOH . E 5 HOH A 66 444 110 HOH HOH . E 5 HOH A 67 445 112 HOH HOH . E 5 HOH A 68 446 114 HOH HOH . E 5 HOH A 69 447 115 HOH HOH . E 5 HOH A 70 448 117 HOH HOH . E 5 HOH A 71 449 118 HOH HOH . E 5 HOH A 72 450 119 HOH HOH . E 5 HOH A 73 451 120 HOH HOH . E 5 HOH A 74 452 121 HOH HOH . E 5 HOH A 75 453 122 HOH HOH . E 5 HOH A 76 454 123 HOH HOH . E 5 HOH A 77 455 124 HOH HOH . E 5 HOH A 78 456 125 HOH HOH . E 5 HOH A 79 457 127 HOH HOH . E 5 HOH A 80 458 128 HOH HOH . E 5 HOH A 81 459 130 HOH HOH . E 5 HOH A 82 460 131 HOH HOH . E 5 HOH A 83 461 132 HOH HOH . F 5 HOH B 1 4 4 HOH HOH . F 5 HOH B 2 5 5 HOH HOH . F 5 HOH B 3 10 10 HOH HOH . F 5 HOH B 4 11 11 HOH HOH . F 5 HOH B 5 13 13 HOH HOH . F 5 HOH B 6 14 14 HOH HOH . F 5 HOH B 7 16 16 HOH HOH . F 5 HOH B 8 28 28 HOH HOH . F 5 HOH B 9 32 32 HOH HOH . F 5 HOH B 10 35 35 HOH HOH . F 5 HOH B 11 37 37 HOH HOH . F 5 HOH B 12 38 38 HOH HOH . F 5 HOH B 13 48 48 HOH HOH . F 5 HOH B 14 56 56 HOH HOH . F 5 HOH B 15 57 57 HOH HOH . F 5 HOH B 16 59 59 HOH HOH . F 5 HOH B 17 60 60 HOH HOH . F 5 HOH B 18 62 62 HOH HOH . F 5 HOH B 19 63 63 HOH HOH . F 5 HOH B 20 65 65 HOH HOH . F 5 HOH B 21 72 72 HOH HOH . F 5 HOH B 22 74 74 HOH HOH . F 5 HOH B 23 75 75 HOH HOH . F 5 HOH B 24 79 79 HOH HOH . F 5 HOH B 25 80 80 HOH HOH . F 5 HOH B 26 84 84 HOH HOH . F 5 HOH B 27 86 86 HOH HOH . F 5 HOH B 28 89 89 HOH HOH . F 5 HOH B 29 98 98 HOH HOH . F 5 HOH B 30 99 99 HOH HOH . F 5 HOH B 31 101 101 HOH HOH . F 5 HOH B 32 102 102 HOH HOH . F 5 HOH B 33 104 104 HOH HOH . F 5 HOH B 34 106 106 HOH HOH . F 5 HOH B 35 111 111 HOH HOH . F 5 HOH B 36 113 113 HOH HOH . F 5 HOH B 37 116 116 HOH HOH . F 5 HOH B 38 126 126 HOH HOH . F 5 HOH B 39 129 129 HOH HOH . F 5 HOH B 40 435 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 11.332 _atom_site.Cartn_y 0.523 _atom_site.Cartn_z 24.941 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 33.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 376 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #