data_3DCO # _model_server_result.job_id p0rX8unSL6oq2BqJGi6ohQ _model_server_result.datetime_utc '2025-03-13 14:59:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":601}' # _entry.id 3DCO # _exptl.entry_id 3DCO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 853.906 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TAXOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DCO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 9 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 109 N SER 94 1_555 D MG MG . N MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc2 E O2B ADP . N ADP 401 1_555 D MG MG . N MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc3 F MG MG . A MG 501 1_555 H O1G GTP . B GTP 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? # _chem_comp.formula 'C47 H51 N O14' _chem_comp.formula_weight 853.906 _chem_comp.id TA1 _chem_comp.mon_nstd_flag . _chem_comp.name TAXOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C01 TA1 sing 427 n n O01 H011 TA1 sing 428 n n C01 C02 TA1 sing 429 n n C01 C43 TA1 sing 430 n n C01 C45 TA1 sing 431 n n C02 O02 TA1 sing 432 n n C02 C10 TA1 sing 433 n n C02 H021 TA1 sing 434 n n O02 C03 TA1 sing 435 n n C03 O03 TA1 doub 436 n n C03 C04 TA1 sing 437 n n C04 C05 TA1 doub 438 n y C04 C09 TA1 sing 439 n y C05 C06 TA1 sing 440 n y C05 H051 TA1 sing 441 n n C06 C07 TA1 doub 442 n y C06 H061 TA1 sing 443 n n C07 C08 TA1 sing 444 n y C07 HC71 TA1 sing 445 n n C08 C09 TA1 doub 446 n y C08 H081 TA1 sing 447 n n C09 H091 TA1 sing 448 n n C10 C11 TA1 sing 449 n n C10 C18 TA1 sing 450 n n C10 H101 TA1 sing 451 n n C11 O04 TA1 sing 452 n n C11 C14 TA1 sing 453 n n C11 C15 TA1 sing 454 n n O04 C12 TA1 sing 455 n n C12 O05 TA1 doub 456 n n C12 C13 TA1 sing 457 n n C13 H131 TA1 sing 458 n n C13 H132 TA1 sing 459 n n C13 H133 TA1 sing 460 n n C14 O06 TA1 sing 461 n n C14 H141 TA1 sing 462 n n C14 H142 TA1 sing 463 n n O06 C15 TA1 sing 464 n n C15 C16 TA1 sing 465 n n C15 H151 TA1 sing 466 n n C16 C17 TA1 sing 467 n n C16 H161 TA1 sing 468 n n C16 H162 TA1 sing 469 n n C17 O07 TA1 sing 470 n n C17 C18 TA1 sing 471 n n C17 H171 TA1 sing 472 n n O07 H071 TA1 sing 473 n n C18 C19 TA1 sing 474 n n C18 C20 TA1 sing 475 n n C19 H191 TA1 sing 476 n n C19 H192 TA1 sing 477 n n C19 H193 TA1 sing 478 n n C20 O08 TA1 doub 479 n n C20 C21 TA1 sing 480 n n C21 O09 TA1 sing 481 n n C21 C24 TA1 sing 482 n n C21 H211 TA1 sing 483 n n O09 C22 TA1 sing 484 n n C22 O10 TA1 doub 485 n n C22 C23 TA1 sing 486 n n C23 H231 TA1 sing 487 n n C23 H232 TA1 sing 488 n n C23 H233 TA1 sing 489 n n C24 C25 TA1 doub 490 n n C24 C45 TA1 sing 491 n n C25 C26 TA1 sing 492 n n C25 C44 TA1 sing 493 n n C26 O11 TA1 sing 494 n n C26 C43 TA1 sing 495 n n C26 H261 TA1 sing 496 n n O11 C27 TA1 sing 497 n n C27 O12 TA1 doub 498 n n C27 C28 TA1 sing 499 n n C28 O13 TA1 sing 500 n n C28 C29 TA1 sing 501 n n C28 H281 TA1 sing 502 n n O13 HO11 TA1 sing 503 n n C29 N01 TA1 sing 504 n n C29 C37 TA1 sing 505 n n C29 H291 TA1 sing 506 n n N01 C30 TA1 sing 507 n n N01 HN01 TA1 sing 508 n n C30 O14 TA1 doub 509 n n C30 C31 TA1 sing 510 n n C31 C32 TA1 doub 511 n y C31 C36 TA1 sing 512 n y C32 C33 TA1 sing 513 n y C32 H321 TA1 sing 514 n n C33 C34 TA1 doub 515 n y C33 H331 TA1 sing 516 n n C34 C35 TA1 sing 517 n y C34 H341 TA1 sing 518 n n C35 C36 TA1 doub 519 n y C35 H351 TA1 sing 520 n n C36 H361 TA1 sing 521 n n C37 C38 TA1 doub 522 n y C37 C42 TA1 sing 523 n y C38 C39 TA1 sing 524 n y C38 H381 TA1 sing 525 n n C39 C40 TA1 doub 526 n y C39 H391 TA1 sing 527 n n C40 C41 TA1 sing 528 n y C40 H401 TA1 sing 529 n n C41 C42 TA1 doub 530 n y C41 H411 TA1 sing 531 n n C42 H421 TA1 sing 532 n n C43 H431 TA1 sing 533 n n C43 H432 TA1 sing 534 n n C44 H441 TA1 sing 535 n n C44 H442 TA1 sing 536 n n C44 H443 TA1 sing 537 n n C45 C46 TA1 sing 538 n n C45 C47 TA1 sing 539 n n C46 H461 TA1 sing 540 n n C46 H462 TA1 sing 541 n n C46 H463 TA1 sing 542 n n C47 H471 TA1 sing 543 n n C47 H472 TA1 sing 544 n n C47 H473 TA1 sing 545 n n # _atom_sites.entry_id 3DCO _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MG N 1 402 402 MG MG . E 5 ADP N 1 401 401 ADP ADP . F 4 MG A 1 501 501 MG MG . G 6 ZN A 1 900 900 ZN ZN . H 7 GTP B 1 500 500 GTP GTP . I 8 GDP B 1 600 600 GDP GDP . J 9 TA1 B 1 601 601 TA1 TA1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 TA1 . . . J 9 87.176 -9.773 36.657 1 63.75 ? O01 TA1 601 B 1 HETATM 2 C C01 TA1 . . . J 9 87.331 -10.063 38.059 1 63.37 ? C01 TA1 601 B 1 HETATM 3 C C02 TA1 . . . J 9 88.337 -11.342 38.147 1 64.56 ? C02 TA1 601 B 1 HETATM 4 O O02 TA1 . . . J 9 89.555 -10.818 37.49 1 73.61 ? O02 TA1 601 B 1 HETATM 5 C C03 TA1 . . . J 9 89.886 -11.304 36.203 1 82.3 ? C03 TA1 601 B 1 HETATM 6 O O03 TA1 . . . J 9 89.25 -12.15 35.623 1 81.04 ? O03 TA1 601 B 1 HETATM 7 C C04 TA1 . . . J 9 91.082 -10.702 35.672 1 85.16 ? C04 TA1 601 B 1 HETATM 8 C C05 TA1 . . . J 9 90.894 -10.269 34.288 1 85.81 ? C05 TA1 601 B 1 HETATM 9 C C06 TA1 . . . J 9 92.098 -9.638 33.664 1 88.17 ? C06 TA1 601 B 1 HETATM 10 C C07 TA1 . . . J 9 93.316 -9.486 34.384 1 88.93 ? C07 TA1 601 B 1 HETATM 11 C C08 TA1 . . . J 9 93.361 -9.894 35.569 1 87.81 ? C08 TA1 601 B 1 HETATM 12 C C09 TA1 . . . J 9 92.317 -10.513 36.308 1 86.96 ? C09 TA1 601 B 1 HETATM 13 C C10 TA1 . . . J 9 88.769 -11.902 39.607 1 60.76 ? C10 TA1 601 B 1 HETATM 14 C C11 TA1 . . . J 9 90.341 -12.223 39.76 1 59.46 ? C11 TA1 601 B 1 HETATM 15 O O04 TA1 . . . J 9 91.181 -11.004 39.611 1 58.42 ? O04 TA1 601 B 1 HETATM 16 C C12 TA1 . . . J 9 91.17 -9.99 40.54 1 58.87 ? C12 TA1 601 B 1 HETATM 17 O O05 TA1 . . . J 9 90.506 -9.967 41.533 1 60.49 ? O05 TA1 601 B 1 HETATM 18 C C13 TA1 . . . J 9 92.138 -8.909 40.108 1 55.92 ? C13 TA1 601 B 1 HETATM 19 C C14 TA1 . . . J 9 91.029 -13.204 38.774 1 60.18 ? C14 TA1 601 B 1 HETATM 20 O O06 TA1 . . . J 9 91.477 -14.077 39.837 1 59.01 ? O06 TA1 601 B 1 HETATM 21 C C15 TA1 . . . J 9 90.871 -13.22 40.828 1 59.51 ? C15 TA1 601 B 1 HETATM 22 C C16 TA1 . . . J 9 89.832 -13.986 41.712 1 60.03 ? C16 TA1 601 B 1 HETATM 23 C C17 TA1 . . . J 9 88.424 -13.407 41.653 1 61.43 ? C17 TA1 601 B 1 HETATM 24 O O07 TA1 . . . J 9 87.538 -14.217 42.47 1 62.13 ? O07 TA1 601 B 1 HETATM 25 C C18 TA1 . . . J 9 87.875 -13.221 40.158 1 62.13 ? C18 TA1 601 B 1 HETATM 26 C C19 TA1 . . . J 9 88.121 -14.534 39.355 1 63.64 ? C19 TA1 601 B 1 HETATM 27 C C20 TA1 . . . J 9 86.258 -13.099 40.177 1 65.31 ? C20 TA1 601 B 1 HETATM 28 O O08 TA1 . . . J 9 85.595 -13.976 39.646 1 68.11 ? O08 TA1 601 B 1 HETATM 29 C C21 TA1 . . . J 9 85.533 -11.911 40.821 1 63.59 ? C21 TA1 601 B 1 HETATM 30 O O09 TA1 . . . J 9 84.068 -12.116 40.632 1 58.93 ? O09 TA1 601 B 1 HETATM 31 C C22 TA1 . . . J 9 83.258 -12.372 41.72 1 56.05 ? C22 TA1 601 B 1 HETATM 32 O O10 TA1 . . . J 9 83.628 -12.446 42.851 1 57.49 ? O10 TA1 601 B 1 HETATM 33 C C23 TA1 . . . J 9 81.831 -12.55 41.281 1 54.68 ? C23 TA1 601 B 1 HETATM 34 C C24 TA1 . . . J 9 86.005 -10.595 40.197 1 63.31 ? C24 TA1 601 B 1 HETATM 35 C C25 TA1 . . . J 9 86.68 -9.667 40.983 1 62.6 ? C25 TA1 601 B 1 HETATM 36 C C26 TA1 . . . J 9 87.268 -8.43 40.238 1 60.57 ? C26 TA1 601 B 1 HETATM 37 O O11 TA1 . . . J 9 88.267 -7.679 41.012 1 60.54 ? O11 TA1 601 B 1 HETATM 38 C C27 TA1 . . . J 9 87.846 -6.641 41.723 1 60.84 ? C27 TA1 601 B 1 HETATM 39 O O12 TA1 . . . J 9 86.73 -6.235 41.824 1 60.71 ? O12 TA1 601 B 1 HETATM 40 C C28 TA1 . . . J 9 89.043 -5.963 42.44 1 63.49 ? C28 TA1 601 B 1 HETATM 41 O O13 TA1 . . . J 9 88.55 -4.841 43.146 1 63.94 ? O13 TA1 601 B 1 HETATM 42 C C29 TA1 . . . J 9 90.098 -5.584 41.37 1 64.93 ? C29 TA1 601 B 1 HETATM 43 N N01 TA1 . . . J 9 89.405 -4.817 40.342 1 68.46 ? N01 TA1 601 B 1 HETATM 44 C C30 TA1 . . . J 9 89.822 -4.761 39.055 1 75.26 ? C30 TA1 601 B 1 HETATM 45 O O14 TA1 . . . J 9 90.826 -5.335 38.649 1 72.57 ? O14 TA1 601 B 1 HETATM 46 C C31 TA1 . . . J 9 88.934 -3.962 38.165 1 80.56 ? C31 TA1 601 B 1 HETATM 47 C C32 TA1 . . . J 9 88.669 -2.606 38.347 1 83.75 ? C32 TA1 601 B 1 HETATM 48 C C33 TA1 . . . J 9 87.804 -1.903 37.466 1 86.03 ? C33 TA1 601 B 1 HETATM 49 C C34 TA1 . . . J 9 87.195 -2.595 36.383 1 87.21 ? C34 TA1 601 B 1 HETATM 50 C C35 TA1 . . . J 9 87.452 -3.942 36.194 1 85.33 ? C35 TA1 601 B 1 HETATM 51 C C36 TA1 . . . J 9 88.302 -4.642 37.056 1 84.57 ? C36 TA1 601 B 1 HETATM 52 C C37 TA1 . . . J 9 91.304 -4.855 42.001 1 65.34 ? C37 TA1 601 B 1 HETATM 53 C C38 TA1 . . . J 9 92.405 -5.63 42.401 1 66.62 ? C38 TA1 601 B 1 HETATM 54 C C39 TA1 . . . J 9 93.543 -5.021 42.995 1 67.56 ? C39 TA1 601 B 1 HETATM 55 C C40 TA1 . . . J 9 93.569 -3.628 43.182 1 66.79 ? C40 TA1 601 B 1 HETATM 56 C C41 TA1 . . . J 9 92.488 -2.861 42.787 1 68.49 ? C41 TA1 601 B 1 HETATM 57 C C42 TA1 . . . J 9 91.343 -3.464 42.192 1 66.75 ? C42 TA1 601 B 1 HETATM 58 C C43 TA1 . . . J 9 87.975 -8.853 38.893 1 61.38 ? C43 TA1 601 B 1 HETATM 59 C C44 TA1 . . . J 9 86.976 -9.793 42.474 1 62.81 ? C44 TA1 601 B 1 HETATM 60 C C45 TA1 . . . J 9 85.796 -10.332 38.626 1 63.04 ? C45 TA1 601 B 1 HETATM 61 C C46 TA1 . . . J 9 84.834 -9.073 38.438 1 62.66 ? C46 TA1 601 B 1 HETATM 62 C C47 TA1 . . . J 9 85.096 -11.42 37.778 1 61.96 ? C47 TA1 601 B 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 62 #