data_3DDT
#
_model_server_result.job_id            NYwVjd7s5lsbDXiFMVpdPA 
_model_server_result.datetime_utc      '2025-08-31 04:22:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ddt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":46}' 
#
_entry.id    3DDT 
#
_exptl.entry_id    3DDT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3DDT 
_cell.length_a            76.22 
_cell.length_b            76.22 
_cell.length_c            146.93 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DDT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,G,J,K 1 1 
C,H,I,L 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -38.11 66.008456 -24.488333 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3DDT 
_atom_sites.fract_transf_matrix[1][1]    0.01312 
_atom_sites.fract_transf_matrix[1][2]    0.007575 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01515 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006806 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ZN A 1 46 1 ZN ZN2 . 
E 2 ZN A 1 47 4 ZN ZN2 . 
F 2 ZN B 1 46 2 ZN ZN2 . 
G 2 ZN B 1 47 3 ZN ZN2 . 
H 2 ZN C 1 46 5 ZN ZN2 . 
I 2 ZN C 1 47 6 ZN ZN2 . 
J 3 HOH A 1 48 6 HOH WAT . 
J 3 HOH A 2 49 7 HOH WAT . 
J 3 HOH A 3 50 12 HOH WAT . 
J 3 HOH A 4 51 18 HOH WAT . 
J 3 HOH A 5 52 20 HOH WAT . 
J 3 HOH A 6 53 21 HOH WAT . 
J 3 HOH A 7 54 24 HOH WAT . 
J 3 HOH A 8 55 25 HOH WAT . 
J 3 HOH A 9 56 28 HOH WAT . 
J 3 HOH A 10 57 29 HOH WAT . 
J 3 HOH A 11 58 30 HOH WAT . 
J 3 HOH A 12 59 33 HOH WAT . 
J 3 HOH A 13 60 34 HOH WAT . 
J 3 HOH A 14 61 39 HOH WAT . 
J 3 HOH A 15 62 42 HOH WAT . 
J 3 HOH A 16 63 43 HOH WAT . 
J 3 HOH A 17 64 46 HOH WAT . 
J 3 HOH A 18 65 48 HOH WAT . 
J 3 HOH A 19 66 51 HOH WAT . 
J 3 HOH A 20 67 52 HOH WAT . 
J 3 HOH A 21 68 53 HOH WAT . 
J 3 HOH A 22 69 57 HOH WAT . 
J 3 HOH A 23 70 59 HOH WAT . 
J 3 HOH A 24 71 61 HOH WAT . 
J 3 HOH A 25 72 62 HOH WAT . 
J 3 HOH A 26 73 63 HOH WAT . 
J 3 HOH A 27 74 64 HOH WAT . 
J 3 HOH A 28 75 65 HOH WAT . 
J 3 HOH A 29 76 67 HOH WAT . 
J 3 HOH A 30 77 68 HOH WAT . 
J 3 HOH A 31 78 71 HOH WAT . 
J 3 HOH A 32 79 72 HOH WAT . 
J 3 HOH A 33 80 75 HOH WAT . 
J 3 HOH A 34 81 77 HOH WAT . 
J 3 HOH A 35 82 78 HOH WAT . 
J 3 HOH A 36 83 80 HOH WAT . 
J 3 HOH A 37 84 81 HOH WAT . 
J 3 HOH A 38 85 82 HOH WAT . 
J 3 HOH A 39 86 83 HOH WAT . 
J 3 HOH A 40 87 92 HOH WAT . 
J 3 HOH A 41 88 93 HOH WAT . 
J 3 HOH A 42 89 94 HOH WAT . 
J 3 HOH A 43 90 95 HOH WAT . 
J 3 HOH A 44 91 97 HOH WAT . 
J 3 HOH A 45 92 98 HOH WAT . 
J 3 HOH A 46 93 100 HOH WAT . 
J 3 HOH A 47 94 101 HOH WAT . 
J 3 HOH A 48 95 103 HOH WAT . 
J 3 HOH A 49 96 111 HOH WAT . 
J 3 HOH A 50 97 112 HOH WAT . 
J 3 HOH A 51 98 117 HOH WAT . 
J 3 HOH A 52 99 120 HOH WAT . 
J 3 HOH A 53 100 123 HOH WAT . 
J 3 HOH A 54 101 124 HOH WAT . 
J 3 HOH A 55 102 125 HOH WAT . 
J 3 HOH A 56 103 126 HOH WAT . 
J 3 HOH A 57 104 127 HOH WAT . 
J 3 HOH A 58 105 132 HOH WAT . 
J 3 HOH A 59 106 133 HOH WAT . 
J 3 HOH A 60 107 139 HOH WAT . 
J 3 HOH A 61 108 143 HOH WAT . 
J 3 HOH A 62 109 144 HOH WAT . 
J 3 HOH A 63 110 145 HOH WAT . 
J 3 HOH A 64 111 148 HOH WAT . 
J 3 HOH A 65 112 158 HOH WAT . 
J 3 HOH A 66 113 152 HOH WAT . 
K 3 HOH B 1 48 2 HOH WAT . 
K 3 HOH B 2 49 5 HOH WAT . 
K 3 HOH B 3 50 10 HOH WAT . 
K 3 HOH B 4 51 13 HOH WAT . 
K 3 HOH B 5 52 17 HOH WAT . 
K 3 HOH B 6 53 23 HOH WAT . 
K 3 HOH B 7 54 26 HOH WAT . 
K 3 HOH B 8 55 27 HOH WAT . 
K 3 HOH B 9 56 32 HOH WAT . 
K 3 HOH B 10 57 35 HOH WAT . 
K 3 HOH B 11 58 37 HOH WAT . 
K 3 HOH B 12 59 40 HOH WAT . 
K 3 HOH B 13 60 41 HOH WAT . 
K 3 HOH B 14 61 44 HOH WAT . 
K 3 HOH B 15 62 47 HOH WAT . 
K 3 HOH B 16 63 50 HOH WAT . 
K 3 HOH B 17 64 54 HOH WAT . 
K 3 HOH B 18 65 56 HOH WAT . 
K 3 HOH B 19 66 58 HOH WAT . 
K 3 HOH B 20 67 60 HOH WAT . 
K 3 HOH B 21 68 69 HOH WAT . 
K 3 HOH B 22 69 73 HOH WAT . 
K 3 HOH B 23 70 76 HOH WAT . 
K 3 HOH B 24 71 84 HOH WAT . 
K 3 HOH B 25 72 89 HOH WAT . 
K 3 HOH B 26 73 91 HOH WAT . 
K 3 HOH B 27 74 96 HOH WAT . 
K 3 HOH B 28 75 99 HOH WAT . 
K 3 HOH B 29 76 104 HOH WAT . 
K 3 HOH B 30 77 105 HOH WAT . 
K 3 HOH B 31 78 107 HOH WAT . 
K 3 HOH B 32 79 110 HOH WAT . 
K 3 HOH B 33 80 114 HOH WAT . 
K 3 HOH B 34 81 115 HOH WAT . 
K 3 HOH B 35 82 116 HOH WAT . 
K 3 HOH B 36 83 118 HOH WAT . 
K 3 HOH B 37 84 121 HOH WAT . 
K 3 HOH B 38 85 128 HOH WAT . 
K 3 HOH B 39 86 141 HOH WAT . 
K 3 HOH B 40 87 151 HOH WAT . 
K 3 HOH B 41 88 155 HOH WAT . 
K 3 HOH B 42 89 157 HOH WAT . 
L 3 HOH C 1 48 154 HOH WAT . 
L 3 HOH C 2 49 1 HOH WAT . 
L 3 HOH C 3 50 3 HOH WAT . 
L 3 HOH C 4 51 4 HOH WAT . 
L 3 HOH C 5 52 8 HOH WAT . 
L 3 HOH C 6 53 9 HOH WAT . 
L 3 HOH C 7 54 11 HOH WAT . 
L 3 HOH C 8 55 14 HOH WAT . 
L 3 HOH C 9 56 15 HOH WAT . 
L 3 HOH C 10 57 16 HOH WAT . 
L 3 HOH C 11 58 19 HOH WAT . 
L 3 HOH C 12 59 22 HOH WAT . 
L 3 HOH C 13 60 31 HOH WAT . 
L 3 HOH C 14 61 36 HOH WAT . 
L 3 HOH C 15 62 38 HOH WAT . 
L 3 HOH C 16 63 45 HOH WAT . 
L 3 HOH C 17 64 49 HOH WAT . 
L 3 HOH C 18 65 55 HOH WAT . 
L 3 HOH C 19 66 66 HOH WAT . 
L 3 HOH C 20 67 70 HOH WAT . 
L 3 HOH C 21 68 74 HOH WAT . 
L 3 HOH C 22 69 79 HOH WAT . 
L 3 HOH C 23 70 85 HOH WAT . 
L 3 HOH C 24 71 86 HOH WAT . 
L 3 HOH C 25 72 87 HOH WAT . 
L 3 HOH C 26 73 88 HOH WAT . 
L 3 HOH C 27 74 90 HOH WAT . 
L 3 HOH C 28 75 102 HOH WAT . 
L 3 HOH C 29 76 106 HOH WAT . 
L 3 HOH C 30 77 108 HOH WAT . 
L 3 HOH C 31 78 109 HOH WAT . 
L 3 HOH C 32 79 113 HOH WAT . 
L 3 HOH C 33 80 119 HOH WAT . 
L 3 HOH C 34 81 122 HOH WAT . 
L 3 HOH C 35 82 129 HOH WAT . 
L 3 HOH C 36 83 130 HOH WAT . 
L 3 HOH C 37 84 131 HOH WAT . 
L 3 HOH C 38 85 134 HOH WAT . 
L 3 HOH C 39 86 135 HOH WAT . 
L 3 HOH C 40 87 136 HOH WAT . 
L 3 HOH C 41 88 137 HOH WAT . 
L 3 HOH C 42 89 138 HOH WAT . 
L 3 HOH C 43 90 140 HOH WAT . 
L 3 HOH C 44 91 142 HOH WAT . 
L 3 HOH C 45 92 146 HOH WAT . 
L 3 HOH C 46 93 147 HOH WAT . 
L 3 HOH C 47 94 149 HOH WAT . 
L 3 HOH C 48 95 150 HOH WAT . 
L 3 HOH C 49 96 153 HOH WAT . 
L 3 HOH C 50 97 156 HOH WAT . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -27.613 
_atom_site.Cartn_y               41.101 
_atom_site.Cartn_z               -9.921 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        33.13 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           46 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           410 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#