data_3DDV
#
_model_server_result.job_id            GFxRnM7IfQFeHiS1EHcztw 
_model_server_result.datetime_utc      '2024-10-20 03:32:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ddv 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":146}' 
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_entry.id    3DDV 
#
_exptl.entry_id    3DDV 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3DDV 
_cell.length_a            86.153 
_cell.length_b            86.153 
_cell.length_c            240.059 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3DDV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,H,I 1 1 
C,D,G,J,K 1 2 
A,B,E,F,H,I 2 1 
C,D,G,J,K 3 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_565 x-y,-y+1,-z+1/3 1 0 0 0 -1 0 0 0 -1 -43.0765 74.610687 80.019667 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
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_atom_sites.entry_id                     3DDV 
_atom_sites.fract_transf_matrix[1][1]    0.011607 
_atom_sites.fract_transf_matrix[1][2]    0.006701 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013403 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004166 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MG A 1 146 1 MG MG . 
F 2 MG B 1 146 2 MG MG . 
G 2 MG D 1 146 3 MG MG . 
H 3 HOH A 1 148 8 HOH HOH . 
H 3 HOH A 2 155 20 HOH HOH . 
H 3 HOH A 3 156 21 HOH HOH . 
H 3 HOH A 4 158 26 HOH HOH . 
H 3 HOH A 5 159 27 HOH HOH . 
H 3 HOH A 6 163 31 HOH HOH . 
H 3 HOH A 7 166 34 HOH HOH . 
H 3 HOH A 8 170 38 HOH HOH . 
H 3 HOH A 9 172 40 HOH HOH . 
H 3 HOH A 10 174 42 HOH HOH . 
H 3 HOH A 11 175 43 HOH HOH . 
H 3 HOH A 12 178 49 HOH HOH . 
H 3 HOH A 13 182 57 HOH HOH . 
H 3 HOH A 14 195 77 HOH HOH . 
H 3 HOH A 15 199 83 HOH HOH . 
H 3 HOH A 16 203 89 HOH HOH . 
H 3 HOH A 17 204 91 HOH HOH . 
H 3 HOH A 18 210 103 HOH HOH . 
I 3 HOH B 1 151 12 HOH HOH . 
I 3 HOH B 2 154 17 HOH HOH . 
I 3 HOH B 3 161 29 HOH HOH . 
I 3 HOH B 4 164 32 HOH HOH . 
I 3 HOH B 5 167 35 HOH HOH . 
I 3 HOH B 6 173 41 HOH HOH . 
I 3 HOH B 7 179 52 HOH HOH . 
I 3 HOH B 8 181 56 HOH HOH . 
I 3 HOH B 9 184 62 HOH HOH . 
I 3 HOH B 10 187 68 HOH HOH . 
I 3 HOH B 11 190 71 HOH HOH . 
I 3 HOH B 12 194 76 HOH HOH . 
I 3 HOH B 13 197 81 HOH HOH . 
I 3 HOH B 14 198 82 HOH HOH . 
I 3 HOH B 15 205 94 HOH HOH . 
I 3 HOH B 16 207 98 HOH HOH . 
J 3 HOH C 1 149 10 HOH HOH . 
J 3 HOH C 2 153 16 HOH HOH . 
J 3 HOH C 3 157 22 HOH HOH . 
J 3 HOH C 4 162 30 HOH HOH . 
J 3 HOH C 5 168 36 HOH HOH . 
J 3 HOH C 6 169 37 HOH HOH . 
J 3 HOH C 7 176 44 HOH HOH . 
J 3 HOH C 8 186 66 HOH HOH . 
J 3 HOH C 9 189 70 HOH HOH . 
J 3 HOH C 10 201 85 HOH HOH . 
J 3 HOH C 11 206 96 HOH HOH . 
J 3 HOH C 12 209 101 HOH HOH . 
K 3 HOH D 1 147 7 HOH HOH . 
K 3 HOH D 2 150 11 HOH HOH . 
K 3 HOH D 3 152 13 HOH HOH . 
K 3 HOH D 4 160 28 HOH HOH . 
K 3 HOH D 5 165 33 HOH HOH . 
K 3 HOH D 6 171 39 HOH HOH . 
K 3 HOH D 7 177 45 HOH HOH . 
K 3 HOH D 8 180 54 HOH HOH . 
K 3 HOH D 9 183 58 HOH HOH . 
K 3 HOH D 10 185 64 HOH HOH . 
K 3 HOH D 11 188 69 HOH HOH . 
K 3 HOH D 12 191 72 HOH HOH . 
K 3 HOH D 13 192 73 HOH HOH . 
K 3 HOH D 14 193 75 HOH HOH . 
K 3 HOH D 15 196 78 HOH HOH . 
K 3 HOH D 16 200 84 HOH HOH . 
K 3 HOH D 17 202 87 HOH HOH . 
K 3 HOH D 18 208 99 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               31.005 
_atom_site.Cartn_y               26.686 
_atom_site.Cartn_z               34.433 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        88.95 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           146 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#