data_3DEA
#
_model_server_result.job_id            hFM1rRzMjUwljlPWiUTZAA 
_model_server_result.datetime_utc      '2024-11-15 04:23:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dea 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    3DEA 
#
_exptl.entry_id    3DEA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              248.265 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,1,1-trifluoro-3-[(2-phenylethyl)sulfanyl]propan-2-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3DEA 
_cell.length_a            43.32 
_cell.length_b            88.32 
_cell.length_c            123.69 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DEA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 46 1_555 A SG CYS 102 A CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf2 A SG CYS 164 A CYS 187 1_555 A SG CYS 171 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
disulf ? disulf3 B SG CYS 23 B CYS 46 1_555 B SG CYS 102 B CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf4 B SG CYS 164 B CYS 187 1_555 B SG CYS 171 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? 
#
_chem_comp.formula           'C11 H11 F3 O S' 
_chem_comp.formula_weight    248.265 
_chem_comp.id                HZH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,1,1-trifluoro-3-[(2-phenylethyl)sulfanyl]propan-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '3-phenethylthio-1,1,1-trifluoropropan-2-one, PETFP' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F2 C11 HZH sing 152 n n 
C11 F1 HZH sing 153 n n 
C11 F3 HZH sing 154 n n 
C11 C10 HZH sing 155 n n 
C10 O1 HZH doub 156 n n 
C10 C9 HZH sing 157 n n 
C9 S HZH sing 158 n n 
S C8 HZH sing 159 n n 
C8 C7 HZH sing 160 n n 
C7 C6 HZH sing 161 n n 
C6 C4 HZH doub 162 n y 
C6 C5 HZH sing 163 n y 
C4 C2 HZH sing 164 n y 
C2 C1 HZH doub 165 n y 
C1 C3 HZH sing 166 n y 
C3 C5 HZH doub 167 n y 
C9 H9 HZH sing 168 n n 
C9 H9A HZH sing 169 n n 
C8 H8 HZH sing 170 n n 
C8 H8A HZH sing 171 n n 
C7 H7 HZH sing 172 n n 
C7 H7A HZH sing 173 n n 
C4 H4 HZH sing 174 n n 
C2 H2 HZH sing 175 n n 
C1 H1 HZH sing 176 n n 
C3 H3 HZH sing 177 n n 
C5 H5 HZH sing 178 n n 
#
_atom_sites.entry_id                     3DEA 
_atom_sites.fract_transf_matrix[1][1]    0.023085 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011322 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008085 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HZH A 1 401 401 HZH HZH . 
D 2 HZH B 1 402 402 HZH HZH . 
E 3 HOH A 1 402 1 HOH HOH . 
E 3 HOH A 2 403 2 HOH HOH . 
E 3 HOH A 3 404 3 HOH HOH . 
E 3 HOH A 4 405 4 HOH HOH . 
E 3 HOH A 5 406 5 HOH HOH . 
E 3 HOH A 6 407 6 HOH HOH . 
E 3 HOH A 7 408 7 HOH HOH . 
E 3 HOH A 8 409 8 HOH HOH . 
E 3 HOH A 9 410 10 HOH HOH . 
E 3 HOH A 10 411 13 HOH HOH . 
E 3 HOH A 11 412 14 HOH HOH . 
E 3 HOH A 12 413 16 HOH HOH . 
E 3 HOH A 13 414 17 HOH HOH . 
E 3 HOH A 14 415 20 HOH HOH . 
E 3 HOH A 15 416 21 HOH HOH . 
E 3 HOH A 16 417 24 HOH HOH . 
E 3 HOH A 17 418 29 HOH HOH . 
E 3 HOH A 18 419 32 HOH HOH . 
E 3 HOH A 19 420 33 HOH HOH . 
E 3 HOH A 20 421 34 HOH HOH . 
E 3 HOH A 21 422 35 HOH HOH . 
E 3 HOH A 22 423 39 HOH HOH . 
E 3 HOH A 23 424 41 HOH HOH . 
E 3 HOH A 24 425 42 HOH HOH . 
E 3 HOH A 25 426 44 HOH HOH . 
E 3 HOH A 26 427 46 HOH HOH . 
E 3 HOH A 27 428 47 HOH HOH . 
E 3 HOH A 28 429 50 HOH HOH . 
E 3 HOH A 29 430 51 HOH HOH . 
E 3 HOH A 30 431 52 HOH HOH . 
E 3 HOH A 31 432 54 HOH HOH . 
E 3 HOH A 32 433 56 HOH HOH . 
E 3 HOH A 33 434 58 HOH HOH . 
E 3 HOH A 34 435 59 HOH HOH . 
E 3 HOH A 35 436 61 HOH HOH . 
E 3 HOH A 36 437 62 HOH HOH . 
E 3 HOH A 37 438 63 HOH HOH . 
E 3 HOH A 38 439 64 HOH HOH . 
E 3 HOH A 39 440 68 HOH HOH . 
E 3 HOH A 40 441 69 HOH HOH . 
E 3 HOH A 41 442 71 HOH HOH . 
E 3 HOH A 42 443 72 HOH HOH . 
E 3 HOH A 43 444 73 HOH HOH . 
E 3 HOH A 44 445 76 HOH HOH . 
E 3 HOH A 45 446 77 HOH HOH . 
E 3 HOH A 46 447 79 HOH HOH . 
E 3 HOH A 47 448 80 HOH HOH . 
E 3 HOH A 48 449 81 HOH HOH . 
E 3 HOH A 49 450 83 HOH HOH . 
E 3 HOH A 50 451 84 HOH HOH . 
E 3 HOH A 51 452 85 HOH HOH . 
E 3 HOH A 52 453 88 HOH HOH . 
E 3 HOH A 53 454 89 HOH HOH . 
E 3 HOH A 54 455 91 HOH HOH . 
E 3 HOH A 55 456 92 HOH HOH . 
E 3 HOH A 56 457 94 HOH HOH . 
E 3 HOH A 57 458 95 HOH HOH . 
E 3 HOH A 58 459 102 HOH HOH . 
E 3 HOH A 59 460 103 HOH HOH . 
E 3 HOH A 60 461 105 HOH HOH . 
E 3 HOH A 61 462 107 HOH HOH . 
E 3 HOH A 62 463 108 HOH HOH . 
E 3 HOH A 63 464 119 HOH HOH . 
E 3 HOH A 64 465 120 HOH HOH . 
E 3 HOH A 65 466 124 HOH HOH . 
E 3 HOH A 66 467 125 HOH HOH . 
E 3 HOH A 67 468 127 HOH HOH . 
E 3 HOH A 68 469 129 HOH HOH . 
E 3 HOH A 69 470 130 HOH HOH . 
E 3 HOH A 70 471 131 HOH HOH . 
E 3 HOH A 71 472 132 HOH HOH . 
E 3 HOH A 72 473 133 HOH HOH . 
E 3 HOH A 73 474 134 HOH HOH . 
E 3 HOH A 74 475 136 HOH HOH . 
E 3 HOH A 75 476 137 HOH HOH . 
E 3 HOH A 76 477 142 HOH HOH . 
E 3 HOH A 77 478 144 HOH HOH . 
E 3 HOH A 78 479 145 HOH HOH . 
E 3 HOH A 79 480 146 HOH HOH . 
F 3 HOH B 1 403 9 HOH HOH . 
F 3 HOH B 2 404 11 HOH HOH . 
F 3 HOH B 3 405 12 HOH HOH . 
F 3 HOH B 4 406 15 HOH HOH . 
F 3 HOH B 5 407 18 HOH HOH . 
F 3 HOH B 6 408 19 HOH HOH . 
F 3 HOH B 7 409 22 HOH HOH . 
F 3 HOH B 8 410 23 HOH HOH . 
F 3 HOH B 9 411 25 HOH HOH . 
F 3 HOH B 10 412 26 HOH HOH . 
F 3 HOH B 11 413 27 HOH HOH . 
F 3 HOH B 12 414 28 HOH HOH . 
F 3 HOH B 13 415 30 HOH HOH . 
F 3 HOH B 14 416 31 HOH HOH . 
F 3 HOH B 15 417 36 HOH HOH . 
F 3 HOH B 16 418 37 HOH HOH . 
F 3 HOH B 17 419 38 HOH HOH . 
F 3 HOH B 18 420 40 HOH HOH . 
F 3 HOH B 19 421 43 HOH HOH . 
F 3 HOH B 20 422 45 HOH HOH . 
F 3 HOH B 21 423 48 HOH HOH . 
F 3 HOH B 22 424 49 HOH HOH . 
F 3 HOH B 23 425 53 HOH HOH . 
F 3 HOH B 24 426 55 HOH HOH . 
F 3 HOH B 25 427 57 HOH HOH . 
F 3 HOH B 26 428 60 HOH HOH . 
F 3 HOH B 27 429 65 HOH HOH . 
F 3 HOH B 28 430 66 HOH HOH . 
F 3 HOH B 29 431 67 HOH HOH . 
F 3 HOH B 30 432 70 HOH HOH . 
F 3 HOH B 31 433 74 HOH HOH . 
F 3 HOH B 32 434 75 HOH HOH . 
F 3 HOH B 33 435 78 HOH HOH . 
F 3 HOH B 34 436 82 HOH HOH . 
F 3 HOH B 35 437 86 HOH HOH . 
F 3 HOH B 36 438 87 HOH HOH . 
F 3 HOH B 37 439 90 HOH HOH . 
F 3 HOH B 38 440 93 HOH HOH . 
F 3 HOH B 39 441 96 HOH HOH . 
F 3 HOH B 40 442 97 HOH HOH . 
F 3 HOH B 41 443 98 HOH HOH . 
F 3 HOH B 42 444 99 HOH HOH . 
F 3 HOH B 43 445 100 HOH HOH . 
F 3 HOH B 44 446 101 HOH HOH . 
F 3 HOH B 45 447 104 HOH HOH . 
F 3 HOH B 46 448 106 HOH HOH . 
F 3 HOH B 47 449 109 HOH HOH . 
F 3 HOH B 48 450 110 HOH HOH . 
F 3 HOH B 49 451 111 HOH HOH . 
F 3 HOH B 50 452 112 HOH HOH . 
F 3 HOH B 51 453 113 HOH HOH . 
F 3 HOH B 52 454 114 HOH HOH . 
F 3 HOH B 53 455 115 HOH HOH . 
F 3 HOH B 54 456 116 HOH HOH . 
F 3 HOH B 55 457 117 HOH HOH . 
F 3 HOH B 56 458 118 HOH HOH . 
F 3 HOH B 57 459 121 HOH HOH . 
F 3 HOH B 58 460 122 HOH HOH . 
F 3 HOH B 59 461 123 HOH HOH . 
F 3 HOH B 60 462 126 HOH HOH . 
F 3 HOH B 61 463 128 HOH HOH . 
F 3 HOH B 62 464 135 HOH HOH . 
F 3 HOH B 63 465 138 HOH HOH . 
F 3 HOH B 64 466 139 HOH HOH . 
F 3 HOH B 65 467 140 HOH HOH . 
F 3 HOH B 66 468 141 HOH HOH . 
F 3 HOH B 67 469 143 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 F F2 HZH . . . D 2 -3.809 -17.324 12.708 1 48.68 ? F2 HZH 402 B 1 
HETATM 2 C C11 HZH . . . D 2 -4.829 -16.833 12.046 1 50.87 ? C11 HZH 402 B 1 
HETATM 3 F F1 HZH . . . D 2 -5.855 -17.654 12.077 1 47.69 ? F1 HZH 402 B 1 
HETATM 4 F F3 HZH . . . D 2 -4.479 -16.712 10.776 1 51.11 ? F3 HZH 402 B 1 
HETATM 5 C C10 HZH . . . D 2 -5.241 -15.503 12.708 1 50.58 ? C10 HZH 402 B 1 
HETATM 6 O O1 HZH . . . D 2 -4.256 -14.482 12.49 1 44.69 ? O1 HZH 402 B 1 
HETATM 7 C C9 HZH . . . D 2 -5.548 -15.671 14.195 1 57.11 ? C9 HZH 402 B 1 
HETATM 8 S S HZH . . . D 2 -7.104 -16.488 14.382 1 64.31 ? S HZH 402 B 1 
HETATM 9 C C8 HZH . . . D 2 -8.04 -15.299 15.297 1 72.13 ? C8 HZH 402 B 1 
HETATM 10 C C7 HZH . . . D 2 -8.462 -15.697 16.712 1 77.11 ? C7 HZH 402 B 1 
HETATM 11 C C6 HZH . . . D 2 -7.756 -16.944 17.183 1 80.19 ? C6 HZH 402 B 1 
HETATM 12 C C4 HZH . . . D 2 -8.139 -18.205 16.69 1 81.92 ? C4 HZH 402 B 1 
HETATM 13 C C2 HZH . . . D 2 -7.486 -19.358 17.13 1 82.81 ? C2 HZH 402 B 1 
HETATM 14 C C1 HZH . . . D 2 -6.46 -19.248 18.076 1 82.57 ? C1 HZH 402 B 1 
HETATM 15 C C3 HZH . . . D 2 -6.087 -17.99 18.569 1 82.83 ? C3 HZH 402 B 1 
HETATM 16 C C5 HZH . . . D 2 -6.738 -16.836 18.126 1 80.36 ? C5 HZH 402 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#