data_3DEC # _model_server_result.job_id JywXTmPDDi3ORo76dFVAbQ _model_server_result.datetime_utc '2025-03-06 02:08:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dec # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 3DEC # _exptl.entry_id 3DEC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DEC _cell.length_a 80.063 _cell.length_b 211.075 _cell.length_c 71.085 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DEC _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1,2 A,B,C 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 498 A CYS 498 1_555 A SG CYS 523 A CYS 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? covale ? covale1 A C TYR 44 A TYR 44 1_555 A N MSE 45 A MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 45 A MSE 45 1_555 A N SER 46 A SER 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 A C LYS 105 A LYS 105 1_555 A N MSE 106 A MSE 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale4 A C MSE 106 A MSE 106 1_555 A N PHE 107 A PHE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale5 A C ASP 203 A ASP 203 1_555 A N MSE 204 A MSE 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale6 A C MSE 204 A MSE 204 1_555 A N TRP 205 A TRP 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 A C LEU 369 A LEU 369 1_555 A N MSE 370 A MSE 370 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale8 A C MSE 370 A MSE 370 1_555 A N GLU 371 A GLU 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale9 A C LEU 376 A LEU 376 1_555 A N MSE 377 A MSE 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale10 A C MSE 377 A MSE 377 1_555 A N LYS 378 A LYS 378 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale11 A C GLY 417 A GLY 417 1_555 A N MSE 418 A MSE 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C ARG 441 A ARG 441 1_555 A N MSE 442 A MSE 442 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale13 A C MSE 442 A MSE 442 1_555 A N TYR 443 A TYR 443 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale14 A C ARG 499 A ARG 499 1_555 A N MSE 500 A MSE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale15 A C MSE 500 A MSE 500 1_555 A N TYR 501 A TYR 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale16 A C ALA 528 A ALA 528 1_555 A N MSE 529 A MSE 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale17 A C MSE 529 A MSE 529 1_555 A N GLY 530 A GLY 530 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale18 A C GLY 535 A GLY 535 1_555 A N MSE 536 A MSE 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale19 A C MSE 536 A MSE 536 1_555 A N LYS 537 A LYS 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale20 A C PRO 547 A PRO 547 1_555 A N MSE 548 A MSE 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale21 A C MSE 548 A MSE 548 1_555 A N ALA 549 A ALA 549 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale22 A C ARG 774 A ARG 774 1_555 A N MSE 775 A MSE 775 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale23 A C MSE 775 A MSE 775 1_555 A N GLY 776 A GLY 776 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale24 A C GLU 855 A GLU 855 1_555 A N MSE 856 A MSE 856 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale25 A C MSE 856 A MSE 856 1_555 A N ASN 857 A ASN 857 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale26 A C LYS 892 A LYS 892 1_555 A N MSE 893 A MSE 893 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale27 A C MSE 893 A MSE 893 1_555 A N PHE 894 A PHE 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 A O PRO 900 A PRO 900 1_555 B K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc2 A O LEU 942 A LEU 942 1_555 B K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? metalc ? metalc3 A O GLU 943 A GLU 943 1_555 B K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc4 A O ALA 945 A ALA 945 1_555 B K K . A K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? metalc ? metalc5 B K K . A K 1101 1_555 C O HOH . A HOH 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? metalc ? metalc6 B K K . A K 1101 1_555 C O HOH . A HOH 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3DEC _atom_sites.fract_transf_matrix[1][1] 0.01249 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004738 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K A 1 1101 1 K K . C 3 HOH A 1 1102 1 HOH HOH . C 3 HOH A 2 1103 2 HOH HOH . C 3 HOH A 3 1104 3 HOH HOH . C 3 HOH A 4 1105 1 HOH HOH . C 3 HOH A 5 1106 2 HOH HOH . C 3 HOH A 6 1107 3 HOH HOH . C 3 HOH A 7 1108 4 HOH HOH . C 3 HOH A 8 1109 7 HOH HOH . C 3 HOH A 9 1110 10 HOH HOH . C 3 HOH A 10 1111 11 HOH HOH . C 3 HOH A 11 1112 14 HOH HOH . C 3 HOH A 12 1113 15 HOH HOH . C 3 HOH A 13 1114 18 HOH HOH . C 3 HOH A 14 1115 20 HOH HOH . C 3 HOH A 15 1116 22 HOH HOH . C 3 HOH A 16 1117 24 HOH HOH . C 3 HOH A 17 1118 25 HOH HOH . C 3 HOH A 18 1119 26 HOH HOH . C 3 HOH A 19 1120 27 HOH HOH . C 3 HOH A 20 1121 28 HOH HOH . C 3 HOH A 21 1122 31 HOH HOH . C 3 HOH A 22 1123 33 HOH HOH . C 3 HOH A 23 1124 34 HOH HOH . C 3 HOH A 24 1125 35 HOH HOH . C 3 HOH A 25 1126 36 HOH HOH . C 3 HOH A 26 1127 38 HOH HOH . C 3 HOH A 27 1128 41 HOH HOH . C 3 HOH A 28 1129 42 HOH HOH . C 3 HOH A 29 1130 45 HOH HOH . C 3 HOH A 30 1131 46 HOH HOH . C 3 HOH A 31 1132 47 HOH HOH . C 3 HOH A 32 1133 49 HOH HOH . C 3 HOH A 33 1134 54 HOH HOH . C 3 HOH A 34 1135 55 HOH HOH . C 3 HOH A 35 1136 56 HOH HOH . C 3 HOH A 36 1137 62 HOH HOH . C 3 HOH A 37 1138 63 HOH HOH . C 3 HOH A 38 1139 66 HOH HOH . C 3 HOH A 39 1140 69 HOH HOH . C 3 HOH A 40 1141 70 HOH HOH . C 3 HOH A 41 1142 71 HOH HOH . C 3 HOH A 42 1143 72 HOH HOH . C 3 HOH A 43 1144 73 HOH HOH . C 3 HOH A 44 1145 74 HOH HOH . C 3 HOH A 45 1146 76 HOH HOH . C 3 HOH A 46 1147 77 HOH HOH . C 3 HOH A 47 1148 81 HOH HOH . C 3 HOH A 48 1149 84 HOH HOH . C 3 HOH A 49 1150 87 HOH HOH . C 3 HOH A 50 1151 88 HOH HOH . C 3 HOH A 51 1152 90 HOH HOH . C 3 HOH A 52 1153 91 HOH HOH . C 3 HOH A 53 1154 97 HOH HOH . C 3 HOH A 54 1155 103 HOH HOH . C 3 HOH A 55 1156 107 HOH HOH . C 3 HOH A 56 1157 109 HOH HOH . C 3 HOH A 57 1158 112 HOH HOH . C 3 HOH A 58 1159 115 HOH HOH . C 3 HOH A 59 1160 116 HOH HOH . C 3 HOH A 60 1161 120 HOH HOH . C 3 HOH A 61 1162 122 HOH HOH . C 3 HOH A 62 1163 124 HOH HOH . C 3 HOH A 63 1164 126 HOH HOH . C 3 HOH A 64 1165 133 HOH HOH . C 3 HOH A 65 1166 136 HOH HOH . C 3 HOH A 66 1167 138 HOH HOH . C 3 HOH A 67 1168 140 HOH HOH . C 3 HOH A 68 1169 149 HOH HOH . C 3 HOH A 69 1170 152 HOH HOH . C 3 HOH A 70 1171 155 HOH HOH . C 3 HOH A 71 1172 158 HOH HOH . C 3 HOH A 72 1173 160 HOH HOH . C 3 HOH A 73 1174 161 HOH HOH . C 3 HOH A 74 1175 162 HOH HOH . C 3 HOH A 75 1176 163 HOH HOH . C 3 HOH A 76 1177 164 HOH HOH . C 3 HOH A 77 1178 170 HOH HOH . C 3 HOH A 78 1179 177 HOH HOH . C 3 HOH A 79 1180 188 HOH HOH . C 3 HOH A 80 1181 197 HOH HOH . C 3 HOH A 81 1182 205 HOH HOH . C 3 HOH A 82 1183 221 HOH HOH . C 3 HOH A 83 1184 226 HOH HOH . C 3 HOH A 84 1185 229 HOH HOH . C 3 HOH A 85 1186 242 HOH HOH . C 3 HOH A 86 1187 247 HOH HOH . C 3 HOH A 87 1188 251 HOH HOH . C 3 HOH A 88 1189 258 HOH HOH . C 3 HOH A 89 1190 259 HOH HOH . C 3 HOH A 90 1191 261 HOH HOH . C 3 HOH A 91 1192 267 HOH HOH . C 3 HOH A 92 1193 272 HOH HOH . C 3 HOH A 93 1194 305 HOH HOH . C 3 HOH A 94 1195 312 HOH HOH . C 3 HOH A 95 1196 322 HOH HOH . C 3 HOH A 96 1197 330 HOH HOH . C 3 HOH A 97 1198 331 HOH HOH . C 3 HOH A 98 1199 341 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.523 _atom_site.Cartn_y 24.328 _atom_site.Cartn_z -1.508 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.82 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 1101 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #