data_3DKF # _model_server_result.job_id lRF0FbV30TMNYCI3cqu-DA _model_server_result.datetime_utc '2024-10-18 16:29:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dkf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3DKF # _exptl.entry_id 3DKF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 359.408 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-{[6-(1-methyl-1H-pyrazol-4-yl)[1,2,4]triazolo[4,3-b]pyridazin-3-yl]sulfanyl}quinoline _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DKF _cell.length_a 43.089 _cell.length_b 46.679 _cell.length_c 158.482 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DKF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H13 N7 S' _chem_comp.formula_weight 359.408 _chem_comp.id SX8 _chem_comp.mon_nstd_flag . _chem_comp.name 6-{[6-(1-methyl-1H-pyrazol-4-yl)[1,2,4]triazolo[4,3-b]pyridazin-3-yl]sulfanyl}quinoline _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 SX8 sing 290 n y C7 C6 SX8 doub 291 n y C7 H7 SX8 sing 292 n n C5 C6 SX8 sing 293 n y C6 H6 SX8 sing 294 n n N1 C1 SX8 sing 295 n n C1 H1 SX8 sing 296 n n C1 H1A SX8 sing 297 n n C1 H1B SX8 sing 298 n n N2 N1 SX8 sing 299 n y C2 N1 SX8 sing 300 n y N7 C5 SX8 doub 301 n y C5 C3 SX8 sing 302 n y C4 C3 SX8 sing 303 n y C4 N2 SX8 doub 304 n y C4 H4 SX8 sing 305 n n C3 C2 SX8 doub 306 n y C2 H2 SX8 sing 307 n n N6 N7 SX8 sing 308 n y C9 N6 SX8 sing 309 n y N6 C8 SX8 sing 310 n y N3 C8 SX8 doub 311 n y S1 C9 SX8 sing 312 n n N4 C9 SX8 doub 313 n y N4 N3 SX8 sing 314 n y S1 C10 SX8 sing 315 n n C10 C11 SX8 doub 316 n y C10 C18 SX8 sing 317 n y C18 C17 SX8 doub 318 n y C18 H18 SX8 sing 319 n n C17 C13 SX8 sing 320 n y C17 C16 SX8 sing 321 n y C12 C13 SX8 doub 322 n y C13 N5 SX8 sing 323 n y C11 C12 SX8 sing 324 n y C12 H12 SX8 sing 325 n n C11 H11 SX8 sing 326 n n C16 C15 SX8 doub 327 n y C16 H16 SX8 sing 328 n n C15 C14 SX8 sing 329 n y C15 H15 SX8 sing 330 n n N5 C14 SX8 doub 331 n y C14 H14 SX8 sing 332 n n # _atom_sites.entry_id 3DKF _atom_sites.fract_transf_matrix[1][1] 0.023208 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021423 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00631 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 2 2 CL CL . C 3 SX8 A 1 1 1 SX8 SX8 . D 4 HOH A 1 3 3 HOH HOH . D 4 HOH A 2 4 4 HOH HOH . D 4 HOH A 3 5 5 HOH HOH . D 4 HOH A 4 6 6 HOH HOH . D 4 HOH A 5 7 7 HOH HOH . D 4 HOH A 6 8 8 HOH HOH . D 4 HOH A 7 9 9 HOH HOH . D 4 HOH A 8 10 10 HOH HOH . D 4 HOH A 9 11 11 HOH HOH . D 4 HOH A 10 12 12 HOH HOH . D 4 HOH A 11 13 13 HOH HOH . D 4 HOH A 12 14 14 HOH HOH . D 4 HOH A 13 15 15 HOH HOH . D 4 HOH A 14 16 16 HOH HOH . D 4 HOH A 15 17 17 HOH HOH . D 4 HOH A 16 18 18 HOH HOH . D 4 HOH A 17 19 19 HOH HOH . D 4 HOH A 18 20 20 HOH HOH . D 4 HOH A 19 21 21 HOH HOH . D 4 HOH A 20 22 22 HOH HOH . D 4 HOH A 21 23 23 HOH HOH . D 4 HOH A 22 24 24 HOH HOH . D 4 HOH A 23 25 25 HOH HOH . D 4 HOH A 24 26 26 HOH HOH . D 4 HOH A 25 27 27 HOH HOH . D 4 HOH A 26 28 28 HOH HOH . D 4 HOH A 27 29 29 HOH HOH . D 4 HOH A 28 30 30 HOH HOH . D 4 HOH A 29 31 31 HOH HOH . D 4 HOH A 30 32 32 HOH HOH . D 4 HOH A 31 33 33 HOH HOH . D 4 HOH A 32 34 34 HOH HOH . D 4 HOH A 33 35 35 HOH HOH . D 4 HOH A 34 36 36 HOH HOH . D 4 HOH A 35 37 37 HOH HOH . D 4 HOH A 36 38 38 HOH HOH . D 4 HOH A 37 39 39 HOH HOH . D 4 HOH A 38 40 40 HOH HOH . D 4 HOH A 39 41 41 HOH HOH . D 4 HOH A 40 42 42 HOH HOH . D 4 HOH A 41 43 43 HOH HOH . D 4 HOH A 42 44 44 HOH HOH . D 4 HOH A 43 45 45 HOH HOH . D 4 HOH A 44 46 46 HOH HOH . D 4 HOH A 45 47 47 HOH HOH . D 4 HOH A 46 48 48 HOH HOH . D 4 HOH A 47 49 49 HOH HOH . D 4 HOH A 48 50 50 HOH HOH . D 4 HOH A 49 51 51 HOH HOH . D 4 HOH A 50 52 52 HOH HOH . D 4 HOH A 51 53 53 HOH HOH . D 4 HOH A 52 54 54 HOH HOH . D 4 HOH A 53 55 55 HOH HOH . D 4 HOH A 54 56 56 HOH HOH . D 4 HOH A 55 57 57 HOH HOH . D 4 HOH A 56 58 58 HOH HOH . D 4 HOH A 57 59 59 HOH HOH . D 4 HOH A 58 60 60 HOH HOH . D 4 HOH A 59 61 61 HOH HOH . D 4 HOH A 60 62 62 HOH HOH . D 4 HOH A 61 63 63 HOH HOH . D 4 HOH A 62 64 64 HOH HOH . D 4 HOH A 63 65 65 HOH HOH . D 4 HOH A 64 66 66 HOH HOH . D 4 HOH A 65 67 67 HOH HOH . D 4 HOH A 66 68 68 HOH HOH . D 4 HOH A 67 69 69 HOH HOH . D 4 HOH A 68 70 70 HOH HOH . D 4 HOH A 69 71 71 HOH HOH . D 4 HOH A 70 72 72 HOH HOH . D 4 HOH A 71 73 73 HOH HOH . D 4 HOH A 72 74 74 HOH HOH . D 4 HOH A 73 75 75 HOH HOH . D 4 HOH A 74 76 76 HOH HOH . D 4 HOH A 75 77 77 HOH HOH . D 4 HOH A 76 78 78 HOH HOH . D 4 HOH A 77 79 79 HOH HOH . D 4 HOH A 78 80 80 HOH HOH . D 4 HOH A 79 81 81 HOH HOH . D 4 HOH A 80 82 82 HOH HOH . D 4 HOH A 81 83 83 HOH HOH . D 4 HOH A 82 84 84 HOH HOH . D 4 HOH A 83 85 85 HOH HOH . D 4 HOH A 84 86 86 HOH HOH . D 4 HOH A 85 87 87 HOH HOH . D 4 HOH A 86 88 88 HOH HOH . D 4 HOH A 87 89 89 HOH HOH . D 4 HOH A 88 90 90 HOH HOH . D 4 HOH A 89 91 91 HOH HOH . D 4 HOH A 90 92 92 HOH HOH . D 4 HOH A 91 93 93 HOH HOH . D 4 HOH A 92 94 94 HOH HOH . D 4 HOH A 93 95 95 HOH HOH . D 4 HOH A 94 96 96 HOH HOH . D 4 HOH A 95 97 97 HOH HOH . D 4 HOH A 96 98 98 HOH HOH . D 4 HOH A 97 99 99 HOH HOH . D 4 HOH A 98 100 100 HOH HOH . D 4 HOH A 99 101 101 HOH HOH . D 4 HOH A 100 102 102 HOH HOH . D 4 HOH A 101 103 103 HOH HOH . D 4 HOH A 102 104 104 HOH HOH . D 4 HOH A 103 105 105 HOH HOH . D 4 HOH A 104 106 106 HOH HOH . D 4 HOH A 105 107 107 HOH HOH . D 4 HOH A 106 108 108 HOH HOH . D 4 HOH A 107 109 109 HOH HOH . D 4 HOH A 108 110 110 HOH HOH . D 4 HOH A 109 111 111 HOH HOH . D 4 HOH A 110 112 112 HOH HOH . D 4 HOH A 111 113 113 HOH HOH . D 4 HOH A 112 114 114 HOH HOH . D 4 HOH A 113 115 115 HOH HOH . D 4 HOH A 114 116 116 HOH HOH . D 4 HOH A 115 117 117 HOH HOH . D 4 HOH A 116 118 118 HOH HOH . D 4 HOH A 117 119 119 HOH HOH . D 4 HOH A 118 120 120 HOH HOH . D 4 HOH A 119 121 121 HOH HOH . D 4 HOH A 120 122 122 HOH HOH . D 4 HOH A 121 123 123 HOH HOH . D 4 HOH A 122 124 124 HOH HOH . D 4 HOH A 123 125 125 HOH HOH . D 4 HOH A 124 126 126 HOH HOH . D 4 HOH A 125 127 127 HOH HOH . D 4 HOH A 126 128 128 HOH HOH . D 4 HOH A 127 129 129 HOH HOH . D 4 HOH A 128 130 130 HOH HOH . D 4 HOH A 129 131 131 HOH HOH . D 4 HOH A 130 132 132 HOH HOH . D 4 HOH A 131 133 133 HOH HOH . D 4 HOH A 132 134 134 HOH HOH . D 4 HOH A 133 135 135 HOH HOH . D 4 HOH A 134 136 136 HOH HOH . D 4 HOH A 135 137 137 HOH HOH . D 4 HOH A 136 138 138 HOH HOH . D 4 HOH A 137 139 139 HOH HOH . D 4 HOH A 138 140 140 HOH HOH . D 4 HOH A 139 141 141 HOH HOH . D 4 HOH A 140 142 142 HOH HOH . D 4 HOH A 141 143 143 HOH HOH . D 4 HOH A 142 144 144 HOH HOH . D 4 HOH A 143 145 145 HOH HOH . D 4 HOH A 144 146 146 HOH HOH . D 4 HOH A 145 147 147 HOH HOH . D 4 HOH A 146 148 148 HOH HOH . D 4 HOH A 147 149 149 HOH HOH . D 4 HOH A 148 150 150 HOH HOH . D 4 HOH A 149 151 151 HOH HOH . D 4 HOH A 150 152 152 HOH HOH . D 4 HOH A 151 153 153 HOH HOH . D 4 HOH A 152 154 154 HOH HOH . D 4 HOH A 153 155 155 HOH HOH . D 4 HOH A 154 156 156 HOH HOH . D 4 HOH A 155 157 157 HOH HOH . D 4 HOH A 156 158 158 HOH HOH . D 4 HOH A 157 159 159 HOH HOH . D 4 HOH A 158 160 160 HOH HOH . D 4 HOH A 159 161 161 HOH HOH . D 4 HOH A 160 162 162 HOH HOH . D 4 HOH A 161 163 163 HOH HOH . D 4 HOH A 162 164 164 HOH HOH . D 4 HOH A 163 165 165 HOH HOH . D 4 HOH A 164 166 166 HOH HOH . D 4 HOH A 165 167 167 HOH HOH . D 4 HOH A 166 168 168 HOH HOH . D 4 HOH A 167 169 169 HOH HOH . D 4 HOH A 168 170 170 HOH HOH . D 4 HOH A 169 171 171 HOH HOH . D 4 HOH A 170 172 172 HOH HOH . D 4 HOH A 171 173 173 HOH HOH . D 4 HOH A 172 174 174 HOH HOH . D 4 HOH A 173 175 175 HOH HOH . D 4 HOH A 174 176 176 HOH HOH . D 4 HOH A 175 177 177 HOH HOH . D 4 HOH A 176 178 178 HOH HOH . D 4 HOH A 177 179 179 HOH HOH . D 4 HOH A 178 180 180 HOH HOH . D 4 HOH A 179 181 181 HOH HOH . D 4 HOH A 180 182 182 HOH HOH . D 4 HOH A 181 183 183 HOH HOH . D 4 HOH A 182 184 184 HOH HOH . D 4 HOH A 183 185 185 HOH HOH . D 4 HOH A 184 186 186 HOH HOH . D 4 HOH A 185 187 187 HOH HOH . D 4 HOH A 186 188 188 HOH HOH . D 4 HOH A 187 189 189 HOH HOH . D 4 HOH A 188 190 190 HOH HOH . D 4 HOH A 189 191 191 HOH HOH . D 4 HOH A 190 192 192 HOH HOH . D 4 HOH A 191 193 193 HOH HOH . D 4 HOH A 192 194 194 HOH HOH . D 4 HOH A 193 195 195 HOH HOH . D 4 HOH A 194 196 196 HOH HOH . D 4 HOH A 195 197 197 HOH HOH . D 4 HOH A 196 199 199 HOH HOH . D 4 HOH A 197 200 200 HOH HOH . D 4 HOH A 198 201 201 HOH HOH . D 4 HOH A 199 202 202 HOH HOH . D 4 HOH A 200 203 203 HOH HOH . D 4 HOH A 201 204 204 HOH HOH . D 4 HOH A 202 205 205 HOH HOH . D 4 HOH A 203 206 206 HOH HOH . D 4 HOH A 204 207 207 HOH HOH . D 4 HOH A 205 208 208 HOH HOH . D 4 HOH A 206 209 209 HOH HOH . D 4 HOH A 207 210 210 HOH HOH . D 4 HOH A 208 211 211 HOH HOH . D 4 HOH A 209 212 212 HOH HOH . D 4 HOH A 210 213 213 HOH HOH . D 4 HOH A 211 214 214 HOH HOH . D 4 HOH A 212 215 215 HOH HOH . D 4 HOH A 213 216 216 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 SX8 . . . C 3 16.177 16.693 139.108 1 19.29 ? C7 SX8 1 A 1 HETATM 2 C C6 SX8 . . . C 3 15.349 15.817 139.687 1 22.31 ? C6 SX8 1 A 1 HETATM 3 C C1 SX8 . . . C 3 11.595 12.434 141.761 1 26.95 ? C1 SX8 1 A 1 HETATM 4 N N1 SX8 . . . C 3 12.791 12.62 140.969 1 25.44 ? N1 SX8 1 A 1 HETATM 5 C C5 SX8 . . . C 3 15.457 14.387 139.278 1 23.19 ? C5 SX8 1 A 1 HETATM 6 C C4 SX8 . . . C 3 14.445 12.077 139.775 1 26.09 ? C4 SX8 1 A 1 HETATM 7 C C3 SX8 . . . C 3 14.511 13.49 139.899 1 22.87 ? C3 SX8 1 A 1 HETATM 8 C C2 SX8 . . . C 3 13.397 13.797 140.667 1 25.15 ? C2 SX8 1 A 1 HETATM 9 N N2 SX8 . . . C 3 13.41 11.555 140.436 1 27.93 ? N2 SX8 1 A 1 HETATM 10 N N7 SX8 . . . C 3 16.274 13.905 138.374 1 22.04 ? N7 SX8 1 A 1 HETATM 11 N N6 SX8 . . . C 3 17.077 14.877 137.837 1 20.64 ? N6 SX8 1 A 1 HETATM 12 C C8 SX8 . . . C 3 17.08 16.232 138.131 1 19.6 ? C8 SX8 1 A 1 HETATM 13 C C9 SX8 . . . C 3 18.042 14.746 136.887 1 20.96 ? C9 SX8 1 A 1 HETATM 14 N N4 SX8 . . . C 3 18.582 15.909 136.609 1 20.61 ? N4 SX8 1 A 1 HETATM 15 N N3 SX8 . . . C 3 17.968 16.855 137.394 1 20.24 ? N3 SX8 1 A 1 HETATM 16 S S1 SX8 . . . C 3 18.423 13.225 136.154 1 23.09 ? S1 SX8 1 A 1 HETATM 17 C C10 SX8 . . . C 3 19.174 12.301 137.473 1 21.87 ? C10 SX8 1 A 1 HETATM 18 C C18 SX8 . . . C 3 18.556 11.16 138.001 1 23.11 ? C18 SX8 1 A 1 HETATM 19 C C17 SX8 . . . C 3 19.2 10.44 139.034 1 24.14 ? C17 SX8 1 A 1 HETATM 20 C C13 SX8 . . . C 3 20.471 10.854 139.524 1 23.86 ? C13 SX8 1 A 1 HETATM 21 C C12 SX8 . . . C 3 21.054 11.992 138.976 1 23.25 ? C12 SX8 1 A 1 HETATM 22 C C11 SX8 . . . C 3 20.424 12.706 137.948 1 23.71 ? C11 SX8 1 A 1 HETATM 23 C C16 SX8 . . . C 3 18.628 9.297 139.609 1 24.97 ? C16 SX8 1 A 1 HETATM 24 C C15 SX8 . . . C 3 19.308 8.621 140.627 1 23.88 ? C15 SX8 1 A 1 HETATM 25 C C14 SX8 . . . C 3 20.541 9.099 141.041 1 23.13 ? C14 SX8 1 A 1 HETATM 26 N N5 SX8 . . . C 3 21.125 10.197 140.515 1 23.07 ? N5 SX8 1 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #