data_3DL2
#
_model_server_result.job_id            tPR2cxamOsLxg8EBLky05w 
_model_server_result.datetime_utc      '2024-10-19 01:34:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dl2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":502}' 
#
_entry.id    3DL2 
#
_exptl.entry_id    3DL2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3DL2 
_cell.length_a            105.603 
_cell.length_b            105.603 
_cell.length_c            131.918 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DL2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 62 A ASN 230 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? 
metalc ? metalc2 A O LEU 63 A LEU 231 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.807 ? 
metalc ? metalc3 A O VAL 66 A VAL 234 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.799 ? 
metalc ? metalc4 B OD1 ASN 62 B ASN 230 1_555 E NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? 
metalc ? metalc5 B O LEU 63 B LEU 231 1_555 E NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.795 ? 
metalc ? metalc6 B O VAL 66 B VAL 234 1_555 E NA NA . B NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 260 n n 
P O2 PO4 sing 261 n n 
P O3 PO4 sing 262 n n 
P O4 PO4 sing 263 n n 
#
_atom_sites.entry_id                     3DL2 
_atom_sites.fract_transf_matrix[1][1]    0.009469 
_atom_sites.fract_transf_matrix[1][2]    0.005467 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010934 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00758 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 501 501 NA NA . 
D 3 PO4 A 1 502 502 PO4 PO4 . 
E 2 NA B 1 501 501 NA NA . 
F 3 PO4 B 1 502 502 PO4 PO4 . 
G 3 PO4 B 1 503 503 PO4 PO4 . 
H 4 HOH A 1 503 472 HOH HOH . 
H 4 HOH A 2 504 473 HOH HOH . 
H 4 HOH A 3 505 474 HOH HOH . 
H 4 HOH A 4 506 475 HOH HOH . 
H 4 HOH A 5 507 476 HOH HOH . 
H 4 HOH A 6 508 477 HOH HOH . 
H 4 HOH A 7 509 478 HOH HOH . 
H 4 HOH A 8 510 479 HOH HOH . 
H 4 HOH A 9 511 480 HOH HOH . 
H 4 HOH A 10 512 481 HOH HOH . 
H 4 HOH A 11 513 482 HOH HOH . 
H 4 HOH A 12 514 483 HOH HOH . 
H 4 HOH A 13 515 484 HOH HOH . 
H 4 HOH A 14 516 485 HOH HOH . 
H 4 HOH A 15 517 486 HOH HOH . 
H 4 HOH A 16 518 487 HOH HOH . 
H 4 HOH A 17 519 488 HOH HOH . 
H 4 HOH A 18 520 489 HOH HOH . 
H 4 HOH A 19 521 490 HOH HOH . 
H 4 HOH A 20 522 491 HOH HOH . 
H 4 HOH A 21 523 492 HOH HOH . 
H 4 HOH A 22 524 493 HOH HOH . 
H 4 HOH A 23 525 494 HOH HOH . 
H 4 HOH A 24 526 495 HOH HOH . 
H 4 HOH A 25 527 496 HOH HOH . 
H 4 HOH A 26 528 497 HOH HOH . 
H 4 HOH A 27 529 498 HOH HOH . 
H 4 HOH A 28 530 499 HOH HOH . 
H 4 HOH A 29 531 500 HOH HOH . 
H 4 HOH A 30 532 501 HOH HOH . 
H 4 HOH A 31 533 502 HOH HOH . 
H 4 HOH A 32 534 503 HOH HOH . 
H 4 HOH A 33 535 504 HOH HOH . 
H 4 HOH A 34 536 505 HOH HOH . 
H 4 HOH A 35 537 506 HOH HOH . 
H 4 HOH A 36 538 507 HOH HOH . 
H 4 HOH A 37 539 508 HOH HOH . 
H 4 HOH A 38 540 509 HOH HOH . 
H 4 HOH A 39 541 510 HOH HOH . 
H 4 HOH A 40 542 511 HOH HOH . 
H 4 HOH A 41 543 512 HOH HOH . 
H 4 HOH A 42 544 513 HOH HOH . 
H 4 HOH A 43 545 514 HOH HOH . 
H 4 HOH A 44 546 515 HOH HOH . 
H 4 HOH A 45 547 516 HOH HOH . 
H 4 HOH A 46 548 517 HOH HOH . 
H 4 HOH A 47 549 518 HOH HOH . 
H 4 HOH A 48 550 519 HOH HOH . 
H 4 HOH A 49 551 520 HOH HOH . 
H 4 HOH A 50 552 521 HOH HOH . 
H 4 HOH A 51 553 522 HOH HOH . 
H 4 HOH A 52 554 523 HOH HOH . 
H 4 HOH A 53 555 524 HOH HOH . 
H 4 HOH A 54 556 525 HOH HOH . 
H 4 HOH A 55 557 526 HOH HOH . 
H 4 HOH A 56 558 527 HOH HOH . 
H 4 HOH A 57 559 528 HOH HOH . 
H 4 HOH A 58 560 529 HOH HOH . 
H 4 HOH A 59 561 530 HOH HOH . 
H 4 HOH A 60 562 531 HOH HOH . 
H 4 HOH A 61 563 532 HOH HOH . 
H 4 HOH A 62 564 533 HOH HOH . 
H 4 HOH A 63 565 534 HOH HOH . 
H 4 HOH A 64 566 535 HOH HOH . 
H 4 HOH A 65 567 536 HOH HOH . 
H 4 HOH A 66 568 537 HOH HOH . 
H 4 HOH A 67 569 538 HOH HOH . 
H 4 HOH A 68 570 539 HOH HOH . 
H 4 HOH A 69 571 540 HOH HOH . 
H 4 HOH A 70 572 541 HOH HOH . 
H 4 HOH A 71 573 542 HOH HOH . 
H 4 HOH A 72 574 543 HOH HOH . 
H 4 HOH A 73 575 544 HOH HOH . 
H 4 HOH A 74 576 545 HOH HOH . 
H 4 HOH A 75 577 546 HOH HOH . 
H 4 HOH A 76 578 547 HOH HOH . 
H 4 HOH A 77 579 548 HOH HOH . 
H 4 HOH A 78 580 549 HOH HOH . 
H 4 HOH A 79 581 550 HOH HOH . 
H 4 HOH A 80 582 551 HOH HOH . 
H 4 HOH A 81 583 552 HOH HOH . 
H 4 HOH A 82 584 553 HOH HOH . 
H 4 HOH A 83 585 554 HOH HOH . 
H 4 HOH A 84 586 555 HOH HOH . 
H 4 HOH A 85 587 556 HOH HOH . 
H 4 HOH A 86 588 557 HOH HOH . 
H 4 HOH A 87 589 558 HOH HOH . 
H 4 HOH A 88 590 559 HOH HOH . 
H 4 HOH A 89 591 560 HOH HOH . 
H 4 HOH A 90 592 561 HOH HOH . 
H 4 HOH A 91 593 562 HOH HOH . 
H 4 HOH A 92 594 563 HOH HOH . 
H 4 HOH A 93 595 564 HOH HOH . 
H 4 HOH A 94 596 565 HOH HOH . 
H 4 HOH A 95 597 566 HOH HOH . 
H 4 HOH A 96 598 567 HOH HOH . 
H 4 HOH A 97 599 568 HOH HOH . 
H 4 HOH A 98 600 569 HOH HOH . 
H 4 HOH A 99 601 570 HOH HOH . 
H 4 HOH A 100 602 571 HOH HOH . 
H 4 HOH A 101 603 572 HOH HOH . 
H 4 HOH A 102 604 573 HOH HOH . 
H 4 HOH A 103 605 574 HOH HOH . 
I 4 HOH B 1 504 472 HOH HOH . 
I 4 HOH B 2 505 473 HOH HOH . 
I 4 HOH B 3 506 474 HOH HOH . 
I 4 HOH B 4 507 475 HOH HOH . 
I 4 HOH B 5 508 476 HOH HOH . 
I 4 HOH B 6 509 477 HOH HOH . 
I 4 HOH B 7 510 478 HOH HOH . 
I 4 HOH B 8 511 479 HOH HOH . 
I 4 HOH B 9 512 480 HOH HOH . 
I 4 HOH B 10 513 481 HOH HOH . 
I 4 HOH B 11 514 482 HOH HOH . 
I 4 HOH B 12 515 483 HOH HOH . 
I 4 HOH B 13 516 484 HOH HOH . 
I 4 HOH B 14 517 485 HOH HOH . 
I 4 HOH B 15 518 486 HOH HOH . 
I 4 HOH B 16 519 487 HOH HOH . 
I 4 HOH B 17 520 488 HOH HOH . 
I 4 HOH B 18 521 489 HOH HOH . 
I 4 HOH B 19 522 490 HOH HOH . 
I 4 HOH B 20 523 491 HOH HOH . 
I 4 HOH B 21 524 492 HOH HOH . 
I 4 HOH B 22 525 493 HOH HOH . 
I 4 HOH B 23 526 494 HOH HOH . 
I 4 HOH B 24 527 495 HOH HOH . 
I 4 HOH B 25 528 496 HOH HOH . 
I 4 HOH B 26 529 497 HOH HOH . 
I 4 HOH B 27 530 498 HOH HOH . 
I 4 HOH B 28 531 499 HOH HOH . 
I 4 HOH B 29 532 500 HOH HOH . 
I 4 HOH B 30 533 501 HOH HOH . 
I 4 HOH B 31 534 502 HOH HOH . 
I 4 HOH B 32 535 503 HOH HOH . 
I 4 HOH B 33 536 504 HOH HOH . 
I 4 HOH B 34 537 505 HOH HOH . 
I 4 HOH B 35 538 506 HOH HOH . 
I 4 HOH B 36 539 507 HOH HOH . 
I 4 HOH B 37 540 508 HOH HOH . 
I 4 HOH B 38 541 509 HOH HOH . 
I 4 HOH B 39 542 510 HOH HOH . 
I 4 HOH B 40 543 511 HOH HOH . 
I 4 HOH B 41 544 512 HOH HOH . 
I 4 HOH B 42 545 513 HOH HOH . 
I 4 HOH B 43 546 514 HOH HOH . 
I 4 HOH B 44 547 515 HOH HOH . 
I 4 HOH B 45 548 516 HOH HOH . 
I 4 HOH B 46 549 517 HOH HOH . 
I 4 HOH B 47 550 518 HOH HOH . 
I 4 HOH B 48 551 519 HOH HOH . 
I 4 HOH B 49 552 520 HOH HOH . 
I 4 HOH B 50 553 521 HOH HOH . 
I 4 HOH B 51 554 522 HOH HOH . 
I 4 HOH B 52 555 523 HOH HOH . 
I 4 HOH B 53 556 525 HOH HOH . 
I 4 HOH B 54 557 526 HOH HOH . 
I 4 HOH B 55 558 527 HOH HOH . 
I 4 HOH B 56 559 528 HOH HOH . 
I 4 HOH B 57 560 529 HOH HOH . 
I 4 HOH B 58 561 530 HOH HOH . 
I 4 HOH B 59 562 531 HOH HOH . 
I 4 HOH B 60 563 532 HOH HOH . 
I 4 HOH B 61 564 533 HOH HOH . 
I 4 HOH B 62 565 534 HOH HOH . 
I 4 HOH B 63 566 535 HOH HOH . 
I 4 HOH B 64 567 536 HOH HOH . 
I 4 HOH B 65 568 537 HOH HOH . 
I 4 HOH B 66 569 538 HOH HOH . 
I 4 HOH B 67 570 539 HOH HOH . 
I 4 HOH B 68 571 540 HOH HOH . 
I 4 HOH B 69 572 541 HOH HOH . 
I 4 HOH B 70 573 542 HOH HOH . 
I 4 HOH B 71 574 543 HOH HOH . 
I 4 HOH B 72 575 544 HOH HOH . 
I 4 HOH B 73 576 545 HOH HOH . 
I 4 HOH B 74 577 546 HOH HOH . 
I 4 HOH B 75 578 547 HOH HOH . 
I 4 HOH B 76 579 548 HOH HOH . 
I 4 HOH B 77 580 549 HOH HOH . 
I 4 HOH B 78 581 550 HOH HOH . 
I 4 HOH B 79 582 551 HOH HOH . 
I 4 HOH B 80 583 552 HOH HOH . 
I 4 HOH B 81 584 553 HOH HOH . 
I 4 HOH B 82 585 554 HOH HOH . 
I 4 HOH B 83 586 555 HOH HOH . 
I 4 HOH B 84 587 556 HOH HOH . 
I 4 HOH B 85 588 557 HOH HOH . 
I 4 HOH B 86 589 558 HOH HOH . 
I 4 HOH B 87 590 559 HOH HOH . 
I 4 HOH B 88 591 560 HOH HOH . 
I 4 HOH B 89 592 561 HOH HOH . 
I 4 HOH B 90 593 562 HOH HOH . 
I 4 HOH B 91 594 563 HOH HOH . 
I 4 HOH B 92 595 564 HOH HOH . 
I 4 HOH B 93 596 565 HOH HOH . 
I 4 HOH B 94 597 566 HOH HOH . 
I 4 HOH B 95 598 567 HOH HOH . 
I 4 HOH B 96 599 568 HOH HOH . 
I 4 HOH B 97 600 569 HOH HOH . 
I 4 HOH B 98 601 570 HOH HOH . 
I 4 HOH B 99 602 571 HOH HOH . 
I 4 HOH B 100 603 572 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 3 -35.156 41.681 5.969 1 47.74 ? P PO4 502 A 1 
HETATM 2 O O1 PO4 . . . D 3 -34.484 40.934 4.856 1 47.67 ? O1 PO4 502 A 1 
HETATM 3 O O2 PO4 . . . D 3 -35.532 43.076 5.555 1 48.68 ? O2 PO4 502 A 1 
HETATM 4 O O3 PO4 . . . D 3 -36.383 40.91 6.372 1 47.22 ? O3 PO4 502 A 1 
HETATM 5 O O4 PO4 . . . D 3 -34.221 41.867 7.138 1 50.68 ? O4 PO4 502 A 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#