data_3DN9
#
_model_server_result.job_id            MI4DLGKIBHZdMuLh9D_7Mg 
_model_server_result.datetime_utc      '2024-10-13 02:31:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dn9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":100}' 
#
_entry.id    3DN9 
#
_exptl.entry_id    3DN9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90.65 
_cell.angle_beta          91.41 
_cell.angle_gamma         91.43 
_cell.entry_id            3DN9 
_cell.length_a            49.204 
_cell.length_b            49.194 
_cell.length_c            49.211 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DN9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 277 n n 
S O2 SO4 doub 278 n n 
S O3 SO4 sing 279 n n 
S O4 SO4 sing 280 n n 
#
_atom_sites.entry_id                     3DN9 
_atom_sites.fract_transf_matrix[1][1]    0.020324 
_atom_sites.fract_transf_matrix[1][2]    0.000507 
_atom_sites.fract_transf_matrix[1][3]    0.000505 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020334 
_atom_sites.fract_transf_matrix[2][3]    0.000243 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020328 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 SO4 A 1 100 3 SO4 SO4 . 
H 2 SO4 E 1 100 1 SO4 SO4 . 
I 2 SO4 E 1 101 2 SO4 SO4 . 
J 2 SO4 F 1 100 4 SO4 SO4 . 
K 3 HOH A 1 101 18 HOH HOH . 
K 3 HOH A 2 102 103 HOH HOH . 
K 3 HOH A 3 103 109 HOH HOH . 
L 3 HOH B 1 100 3 HOH HOH . 
L 3 HOH B 2 101 9 HOH HOH . 
L 3 HOH B 3 102 15 HOH HOH . 
L 3 HOH B 4 103 19 HOH HOH . 
L 3 HOH B 5 104 32 HOH HOH . 
L 3 HOH B 6 105 39 HOH HOH . 
L 3 HOH B 7 106 46 HOH HOH . 
L 3 HOH B 8 107 71 HOH HOH . 
L 3 HOH B 9 108 80 HOH HOH . 
L 3 HOH B 10 109 83 HOH HOH . 
L 3 HOH B 11 110 87 HOH HOH . 
L 3 HOH B 12 111 93 HOH HOH . 
L 3 HOH B 13 112 96 HOH HOH . 
L 3 HOH B 14 113 98 HOH HOH . 
L 3 HOH B 15 114 100 HOH HOH . 
L 3 HOH B 16 115 102 HOH HOH . 
M 3 HOH C 1 100 2 HOH HOH . 
M 3 HOH C 2 101 8 HOH HOH . 
M 3 HOH C 3 102 10 HOH HOH . 
M 3 HOH C 4 103 23 HOH HOH . 
M 3 HOH C 5 104 28 HOH HOH . 
M 3 HOH C 6 105 30 HOH HOH . 
M 3 HOH C 7 106 48 HOH HOH . 
M 3 HOH C 8 107 52 HOH HOH . 
M 3 HOH C 9 108 64 HOH HOH . 
M 3 HOH C 10 109 97 HOH HOH . 
M 3 HOH C 11 110 105 HOH HOH . 
N 3 HOH D 1 100 16 HOH HOH . 
N 3 HOH D 2 101 57 HOH HOH . 
N 3 HOH D 3 102 78 HOH HOH . 
N 3 HOH D 4 103 86 HOH HOH . 
N 3 HOH D 5 104 88 HOH HOH . 
N 3 HOH D 6 105 91 HOH HOH . 
N 3 HOH D 7 106 101 HOH HOH . 
O 3 HOH E 1 102 21 HOH HOH . 
O 3 HOH E 2 103 24 HOH HOH . 
O 3 HOH E 3 104 37 HOH HOH . 
O 3 HOH E 4 105 47 HOH HOH . 
O 3 HOH E 5 106 67 HOH HOH . 
O 3 HOH E 6 107 81 HOH HOH . 
O 3 HOH E 7 108 84 HOH HOH . 
O 3 HOH E 8 109 90 HOH HOH . 
O 3 HOH E 9 110 94 HOH HOH . 
P 3 HOH F 1 101 5 HOH HOH . 
P 3 HOH F 2 102 31 HOH HOH . 
P 3 HOH F 3 103 33 HOH HOH . 
P 3 HOH F 4 104 42 HOH HOH . 
P 3 HOH F 5 105 66 HOH HOH . 
P 3 HOH F 6 106 85 HOH HOH . 
P 3 HOH F 7 107 89 HOH HOH . 
P 3 HOH F 8 108 92 HOH HOH . 
P 3 HOH F 9 109 99 HOH HOH . 
P 3 HOH F 10 110 106 HOH HOH . 
P 3 HOH F 11 111 107 HOH HOH . 
P 3 HOH F 12 112 108 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . J 2 -33.756 8.063 7.688 1 69.97 ? S SO4 100 F 1 
HETATM 2 O O1 SO4 . . . J 2 -33.035 9.075 6.905 1 69.48 ? O1 SO4 100 F 1 
HETATM 3 O O2 SO4 . . . J 2 -34.734 7.338 6.856 1 66.55 ? O2 SO4 100 F 1 
HETATM 4 O O3 SO4 . . . J 2 -32.784 7.112 8.222 1 71.33 ? O3 SO4 100 F 1 
HETATM 5 O O4 SO4 . . . J 2 -34.434 8.706 8.815 1 69.46 ? O4 SO4 100 F 1 
#
_model_server_stats.io_time_ms              107 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#