data_3DOB # _model_server_result.job_id 9DQeyaASiTAq0cvb0YVHjA _model_server_result.datetime_utc '2024-12-26 10:21:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 3DOB # _exptl.entry_id 3DOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3DOB _cell.length_a 102.009 _cell.length_b 102.009 _cell.length_c 80.678 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 3DOB _atom_sites.fract_transf_matrix[1][1] 0.009803 _atom_sites.fract_transf_matrix[1][2] 0.00566 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BME A 1 601 601 BME BME . D 2 BME B 1 602 602 BME BME . E 3 HOH A 1 3 3 HOH HOH . E 3 HOH A 2 4 4 HOH HOH . E 3 HOH A 3 5 5 HOH HOH . E 3 HOH A 4 6 6 HOH HOH . E 3 HOH A 5 7 7 HOH HOH . E 3 HOH A 6 8 8 HOH HOH . E 3 HOH A 7 9 9 HOH HOH . E 3 HOH A 8 11 11 HOH HOH . E 3 HOH A 9 16 16 HOH HOH . E 3 HOH A 10 17 17 HOH HOH . E 3 HOH A 11 18 18 HOH HOH . E 3 HOH A 12 20 20 HOH HOH . E 3 HOH A 13 25 25 HOH HOH . E 3 HOH A 14 26 26 HOH HOH . E 3 HOH A 15 27 27 HOH HOH . E 3 HOH A 16 29 29 HOH HOH . E 3 HOH A 17 32 32 HOH HOH . E 3 HOH A 18 33 33 HOH HOH . E 3 HOH A 19 36 36 HOH HOH . E 3 HOH A 20 37 37 HOH HOH . E 3 HOH A 21 40 40 HOH HOH . E 3 HOH A 22 41 41 HOH HOH . E 3 HOH A 23 42 42 HOH HOH . E 3 HOH A 24 43 43 HOH HOH . E 3 HOH A 25 44 44 HOH HOH . E 3 HOH A 26 45 45 HOH HOH . E 3 HOH A 27 46 46 HOH HOH . E 3 HOH A 28 48 48 HOH HOH . E 3 HOH A 29 49 49 HOH HOH . E 3 HOH A 30 51 51 HOH HOH . E 3 HOH A 31 55 55 HOH HOH . E 3 HOH A 32 57 57 HOH HOH . E 3 HOH A 33 58 58 HOH HOH . E 3 HOH A 34 60 60 HOH HOH . E 3 HOH A 35 61 61 HOH HOH . E 3 HOH A 36 62 62 HOH HOH . E 3 HOH A 37 66 66 HOH HOH . E 3 HOH A 38 67 67 HOH HOH . E 3 HOH A 39 68 68 HOH HOH . E 3 HOH A 40 72 72 HOH HOH . E 3 HOH A 41 73 73 HOH HOH . E 3 HOH A 42 75 75 HOH HOH . E 3 HOH A 43 77 77 HOH HOH . E 3 HOH A 44 79 79 HOH HOH . E 3 HOH A 45 81 81 HOH HOH . E 3 HOH A 46 82 82 HOH HOH . E 3 HOH A 47 86 86 HOH HOH . E 3 HOH A 48 87 87 HOH HOH . E 3 HOH A 49 88 88 HOH HOH . E 3 HOH A 50 90 90 HOH HOH . E 3 HOH A 51 91 91 HOH HOH . E 3 HOH A 52 92 92 HOH HOH . E 3 HOH A 53 93 93 HOH HOH . E 3 HOH A 54 94 94 HOH HOH . E 3 HOH A 55 95 95 HOH HOH . E 3 HOH A 56 107 107 HOH HOH . F 3 HOH B 1 1 1 HOH HOH . F 3 HOH B 2 2 2 HOH HOH . F 3 HOH B 3 10 10 HOH HOH . F 3 HOH B 4 12 12 HOH HOH . F 3 HOH B 5 13 13 HOH HOH . F 3 HOH B 6 14 14 HOH HOH . F 3 HOH B 7 15 15 HOH HOH . F 3 HOH B 8 19 19 HOH HOH . F 3 HOH B 9 21 21 HOH HOH . F 3 HOH B 10 22 22 HOH HOH . F 3 HOH B 11 23 23 HOH HOH . F 3 HOH B 12 24 24 HOH HOH . F 3 HOH B 13 28 28 HOH HOH . F 3 HOH B 14 30 30 HOH HOH . F 3 HOH B 15 31 31 HOH HOH . F 3 HOH B 16 34 34 HOH HOH . F 3 HOH B 17 35 35 HOH HOH . F 3 HOH B 18 38 38 HOH HOH . F 3 HOH B 19 39 39 HOH HOH . F 3 HOH B 20 47 47 HOH HOH . F 3 HOH B 21 50 50 HOH HOH . F 3 HOH B 22 52 52 HOH HOH . F 3 HOH B 23 53 53 HOH HOH . F 3 HOH B 24 54 54 HOH HOH . F 3 HOH B 25 56 56 HOH HOH . F 3 HOH B 26 59 59 HOH HOH . F 3 HOH B 27 63 63 HOH HOH . F 3 HOH B 28 64 64 HOH HOH . F 3 HOH B 29 65 65 HOH HOH . F 3 HOH B 30 69 69 HOH HOH . F 3 HOH B 31 70 70 HOH HOH . F 3 HOH B 32 71 71 HOH HOH . F 3 HOH B 33 74 74 HOH HOH . F 3 HOH B 34 76 76 HOH HOH . F 3 HOH B 35 78 78 HOH HOH . F 3 HOH B 36 80 80 HOH HOH . F 3 HOH B 37 83 83 HOH HOH . F 3 HOH B 38 84 84 HOH HOH . F 3 HOH B 39 85 85 HOH HOH . F 3 HOH B 40 89 89 HOH HOH . F 3 HOH B 41 96 96 HOH HOH . F 3 HOH B 42 97 97 HOH HOH . F 3 HOH B 43 98 98 HOH HOH . F 3 HOH B 44 99 99 HOH HOH . F 3 HOH B 45 100 100 HOH HOH . F 3 HOH B 46 101 101 HOH HOH . F 3 HOH B 47 102 102 HOH HOH . F 3 HOH B 48 103 103 HOH HOH . F 3 HOH B 49 104 104 HOH HOH . F 3 HOH B 50 105 105 HOH HOH . F 3 HOH B 51 106 106 HOH HOH . F 3 HOH B 52 108 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 2 54.302 0.338 7.294 1 45.14 ? C1 BME 602 B 1 HETATM 2 C C2 BME . . . D 2 54.847 -0.996 6.82 1 47.68 ? C2 BME 602 B 1 HETATM 3 O O1 BME . . . D 2 53.717 0.064 8.525 1 46.28 ? O1 BME 602 B 1 HETATM 4 S S2 BME . . . D 2 55.982 -0.684 5.447 1 46.4 ? S2 BME 602 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #