data_3DOH # _model_server_result.job_id ziPruVdzvp_MZ7yYf04JoQ _model_server_result.datetime_utc '2024-11-26 01:53:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3doh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":404}' # _entry.id 3DOH # _exptl.entry_id 3DOH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3DOH _cell.length_a 130.157 _cell.length_b 130.157 _cell.length_c 306.184 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DOH _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? hexameric 6 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N 1 1,2,3 A,C,D,E,F,G,H,M 2 1 B,I,J,K,L,N 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3DOH _atom_sites.fract_transf_matrix[1][1] 0.007683 _atom_sites.fract_transf_matrix[1][2] 0.004436 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008872 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003266 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 400 400 SO4 SO4 . D 2 SO4 A 1 401 401 SO4 SO4 . E 2 SO4 A 1 402 402 SO4 SO4 . F 2 SO4 A 1 403 403 SO4 SO4 . G 2 SO4 A 1 404 404 SO4 SO4 . H 2 SO4 A 1 502 502 SO4 SO4 . I 2 SO4 B 1 500 500 SO4 SO4 . J 2 SO4 B 1 501 501 SO4 SO4 . K 2 SO4 B 1 503 503 SO4 SO4 . L 2 SO4 B 1 504 504 SO4 SO4 . M 3 HOH A 1 503 1 HOH HOH . M 3 HOH A 2 504 4 HOH HOH . M 3 HOH A 3 505 6 HOH HOH . M 3 HOH A 4 506 7 HOH HOH . M 3 HOH A 5 507 8 HOH HOH . M 3 HOH A 6 508 9 HOH HOH . M 3 HOH A 7 509 11 HOH HOH . M 3 HOH A 8 510 12 HOH HOH . M 3 HOH A 9 511 13 HOH HOH . M 3 HOH A 10 512 14 HOH HOH . M 3 HOH A 11 513 18 HOH HOH . M 3 HOH A 12 514 19 HOH HOH . M 3 HOH A 13 515 20 HOH HOH . M 3 HOH A 14 516 21 HOH HOH . M 3 HOH A 15 517 22 HOH HOH . M 3 HOH A 16 518 24 HOH HOH . M 3 HOH A 17 519 25 HOH HOH . M 3 HOH A 18 520 28 HOH HOH . M 3 HOH A 19 521 33 HOH HOH . M 3 HOH A 20 522 37 HOH HOH . M 3 HOH A 21 523 38 HOH HOH . M 3 HOH A 22 524 40 HOH HOH . M 3 HOH A 23 525 42 HOH HOH . M 3 HOH A 24 526 43 HOH HOH . M 3 HOH A 25 527 45 HOH HOH . M 3 HOH A 26 528 46 HOH HOH . M 3 HOH A 27 529 47 HOH HOH . M 3 HOH A 28 530 48 HOH HOH . M 3 HOH A 29 531 49 HOH HOH . M 3 HOH A 30 532 53 HOH HOH . M 3 HOH A 31 533 54 HOH HOH . M 3 HOH A 32 534 56 HOH HOH . M 3 HOH A 33 535 58 HOH HOH . M 3 HOH A 34 536 59 HOH HOH . M 3 HOH A 35 537 61 HOH HOH . M 3 HOH A 36 538 62 HOH HOH . M 3 HOH A 37 539 66 HOH HOH . M 3 HOH A 38 540 69 HOH HOH . M 3 HOH A 39 541 71 HOH HOH . M 3 HOH A 40 542 73 HOH HOH . M 3 HOH A 41 543 74 HOH HOH . M 3 HOH A 42 544 75 HOH HOH . M 3 HOH A 43 545 76 HOH HOH . M 3 HOH A 44 546 78 HOH HOH . M 3 HOH A 45 547 83 HOH HOH . M 3 HOH A 46 548 84 HOH HOH . M 3 HOH A 47 549 89 HOH HOH . M 3 HOH A 48 550 92 HOH HOH . M 3 HOH A 49 551 93 HOH HOH . M 3 HOH A 50 552 94 HOH HOH . M 3 HOH A 51 553 100 HOH HOH . M 3 HOH A 52 554 101 HOH HOH . M 3 HOH A 53 555 102 HOH HOH . M 3 HOH A 54 556 103 HOH HOH . M 3 HOH A 55 557 105 HOH HOH . M 3 HOH A 56 558 108 HOH HOH . M 3 HOH A 57 559 111 HOH HOH . M 3 HOH A 58 560 113 HOH HOH . M 3 HOH A 59 561 114 HOH HOH . M 3 HOH A 60 562 115 HOH HOH . M 3 HOH A 61 563 116 HOH HOH . M 3 HOH A 62 564 117 HOH HOH . M 3 HOH A 63 565 122 HOH HOH . M 3 HOH A 64 566 123 HOH HOH . M 3 HOH A 65 567 125 HOH HOH . M 3 HOH A 66 568 126 HOH HOH . M 3 HOH A 67 569 127 HOH HOH . M 3 HOH A 68 570 129 HOH HOH . M 3 HOH A 69 571 130 HOH HOH . M 3 HOH A 70 572 132 HOH HOH . M 3 HOH A 71 573 133 HOH HOH . M 3 HOH A 72 574 138 HOH HOH . M 3 HOH A 73 575 140 HOH HOH . M 3 HOH A 74 576 144 HOH HOH . M 3 HOH A 75 577 145 HOH HOH . M 3 HOH A 76 578 146 HOH HOH . M 3 HOH A 77 579 147 HOH HOH . M 3 HOH A 78 580 148 HOH HOH . M 3 HOH A 79 581 149 HOH HOH . M 3 HOH A 80 582 152 HOH HOH . M 3 HOH A 81 583 154 HOH HOH . M 3 HOH A 82 584 155 HOH HOH . M 3 HOH A 83 585 158 HOH HOH . M 3 HOH A 84 586 160 HOH HOH . M 3 HOH A 85 587 162 HOH HOH . M 3 HOH A 86 588 164 HOH HOH . M 3 HOH A 87 589 168 HOH HOH . M 3 HOH A 88 590 169 HOH HOH . N 3 HOH B 1 505 2 HOH HOH . N 3 HOH B 2 506 3 HOH HOH . N 3 HOH B 3 507 5 HOH HOH . N 3 HOH B 4 508 10 HOH HOH . N 3 HOH B 5 509 15 HOH HOH . N 3 HOH B 6 510 16 HOH HOH . N 3 HOH B 7 511 17 HOH HOH . N 3 HOH B 8 512 23 HOH HOH . N 3 HOH B 9 513 26 HOH HOH . N 3 HOH B 10 514 27 HOH HOH . N 3 HOH B 11 515 29 HOH HOH . N 3 HOH B 12 516 30 HOH HOH . N 3 HOH B 13 517 31 HOH HOH . N 3 HOH B 14 518 32 HOH HOH . N 3 HOH B 15 519 34 HOH HOH . N 3 HOH B 16 520 35 HOH HOH . N 3 HOH B 17 521 36 HOH HOH . N 3 HOH B 18 522 39 HOH HOH . N 3 HOH B 19 523 41 HOH HOH . N 3 HOH B 20 524 44 HOH HOH . N 3 HOH B 21 525 50 HOH HOH . N 3 HOH B 22 526 51 HOH HOH . N 3 HOH B 23 527 52 HOH HOH . N 3 HOH B 24 528 55 HOH HOH . N 3 HOH B 25 529 57 HOH HOH . N 3 HOH B 26 530 63 HOH HOH . N 3 HOH B 27 531 65 HOH HOH . N 3 HOH B 28 532 67 HOH HOH . N 3 HOH B 29 533 70 HOH HOH . N 3 HOH B 30 534 77 HOH HOH . N 3 HOH B 31 535 79 HOH HOH . N 3 HOH B 32 536 80 HOH HOH . N 3 HOH B 33 537 82 HOH HOH . N 3 HOH B 34 538 85 HOH HOH . N 3 HOH B 35 539 86 HOH HOH . N 3 HOH B 36 540 87 HOH HOH . N 3 HOH B 37 541 88 HOH HOH . N 3 HOH B 38 542 90 HOH HOH . N 3 HOH B 39 543 91 HOH HOH . N 3 HOH B 40 544 95 HOH HOH . N 3 HOH B 41 545 98 HOH HOH . N 3 HOH B 42 546 99 HOH HOH . N 3 HOH B 43 547 104 HOH HOH . N 3 HOH B 44 548 106 HOH HOH . N 3 HOH B 45 549 107 HOH HOH . N 3 HOH B 46 550 109 HOH HOH . N 3 HOH B 47 551 110 HOH HOH . N 3 HOH B 48 552 112 HOH HOH . N 3 HOH B 49 553 119 HOH HOH . N 3 HOH B 50 554 120 HOH HOH . N 3 HOH B 51 555 121 HOH HOH . N 3 HOH B 52 556 128 HOH HOH . N 3 HOH B 53 557 131 HOH HOH . N 3 HOH B 54 558 134 HOH HOH . N 3 HOH B 55 559 135 HOH HOH . N 3 HOH B 56 560 136 HOH HOH . N 3 HOH B 57 561 141 HOH HOH . N 3 HOH B 58 562 142 HOH HOH . N 3 HOH B 59 563 143 HOH HOH . N 3 HOH B 60 564 150 HOH HOH . N 3 HOH B 61 565 151 HOH HOH . N 3 HOH B 62 566 153 HOH HOH . N 3 HOH B 63 567 156 HOH HOH . N 3 HOH B 64 568 157 HOH HOH . N 3 HOH B 65 569 159 HOH HOH . N 3 HOH B 66 570 163 HOH HOH . N 3 HOH B 67 571 166 HOH HOH . N 3 HOH B 68 572 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . G 2 25.564 -22.143 50.217 1 49.65 ? S SO4 404 A 1 HETATM 2 O O1 SO4 . . . G 2 26.433 -20.984 50.416 1 50.49 ? O1 SO4 404 A 1 HETATM 3 O O2 SO4 . . . G 2 26.214 -23.277 50.884 1 50.93 ? O2 SO4 404 A 1 HETATM 4 O O3 SO4 . . . G 2 25.369 -22.424 48.788 1 48.32 ? O3 SO4 404 A 1 HETATM 5 O O4 SO4 . . . G 2 24.254 -21.895 50.832 1 50.16 ? O4 SO4 404 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 5 #