data_3DOK # _model_server_result.job_id itDrWxnIk6MzrlWz67xnAA _model_server_result.datetime_utc '2024-12-21 16:04:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3dok # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":999}' # _entry.id 3DOK # _exptl.entry_id 3DOK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 518.369 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-{4-chloro-2-[(3-chloro-5-cyanophenyl)carbonyl]phenoxy}-N-(2-methyl-4-sulfamoylphenyl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3DOK _cell.length_a 136.94 _cell.length_b 109.77 _cell.length_c 72.48 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3DOK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 279 A LEU 279 1_555 A N CSD 280 A CSD 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSD 280 A CSD 280 1_555 A N LYS 281 A LYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C23 H17 Cl2 N3 O5 S' _chem_comp.formula_weight 518.369 _chem_comp.id GWJ _chem_comp.mon_nstd_flag . _chem_comp.name 2-{4-chloro-2-[(3-chloro-5-cyanophenyl)carbonyl]phenoxy}-N-(2-methyl-4-sulfamoylphenyl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GWJ doub 144 n y C1 C6 GWJ sing 145 n y C1 O2 GWJ sing 146 n n C2 C3 GWJ sing 147 n y C2 C7 GWJ sing 148 n n C3 C4 GWJ doub 149 n y C6 C5 GWJ doub 150 n y C4 C5 GWJ sing 151 n y C4 CL GWJ sing 152 n n C7 O1 GWJ doub 153 n n C7 C8 GWJ sing 154 n n C8 C9 GWJ doub 155 n y C8 C13 GWJ sing 156 n y C9 C10 GWJ sing 157 n y C10 C11 GWJ doub 158 n y C10 CL1 GWJ sing 159 n n C11 C12 GWJ sing 160 n y C12 C13 GWJ doub 161 n y C12 C26 GWJ sing 162 n n O2 C15 GWJ sing 163 n n C15 C16 GWJ sing 164 n n C16 O3 GWJ doub 165 n n C16 N1 GWJ sing 166 n n N1 C17 GWJ sing 167 n n C17 C18 GWJ doub 168 n y C17 C22 GWJ sing 169 n y C18 C23 GWJ sing 170 n n C18 C19 GWJ sing 171 n y C19 C20 GWJ doub 172 n y C20 C21 GWJ sing 173 n y C20 S GWJ sing 174 n n C21 C22 GWJ doub 175 n y N3 S GWJ sing 176 n n S O4 GWJ doub 177 n n S O5 GWJ doub 178 n n C26 N2 GWJ trip 179 n n C3 H3 GWJ sing 180 n n C6 H6 GWJ sing 181 n n C5 H5 GWJ sing 182 n n C9 H9 GWJ sing 183 n n C11 H11 GWJ sing 184 n n C13 H13 GWJ sing 185 n n C15 H15 GWJ sing 186 n n C15 H15A GWJ sing 187 n n N1 HN1 GWJ sing 188 n n C23 H23 GWJ sing 189 n n C23 H23A GWJ sing 190 n n C23 H23B GWJ sing 191 n n C19 H19 GWJ sing 192 n n C21 H21 GWJ sing 193 n n C22 H22 GWJ sing 194 n n N3 HN3 GWJ sing 195 n n N3 HN3A GWJ sing 196 n n # _atom_sites.entry_id 3DOK _atom_sites.fract_transf_matrix[1][1] 0.007302 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013797 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 1300 1300 PO4 PO4 . D 4 GWJ A 1 999 999 GWJ GWJ . E 5 HOH A 1 1301 1 HOH HOH . E 5 HOH A 2 1302 2 HOH HOH . E 5 HOH A 3 1303 3 HOH HOH . E 5 HOH A 4 1304 4 HOH HOH . E 5 HOH A 5 1305 7 HOH HOH . E 5 HOH A 6 1306 8 HOH HOH . F 5 HOH B 1 441 5 HOH HOH . F 5 HOH B 2 442 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GWJ . . . D 4 -2.235 -34.437 22.185 1 55.15 ? C1 GWJ 999 A 1 HETATM 2 C C2 GWJ . . . D 4 -2.131 -34.596 23.69 1 46.96 ? C2 GWJ 999 A 1 HETATM 3 C C3 GWJ . . . D 4 -1.497 -35.653 24.206 1 35.14 ? C3 GWJ 999 A 1 HETATM 4 C C6 GWJ . . . D 4 -1.679 -35.416 21.381 1 43.82 ? C6 GWJ 999 A 1 HETATM 5 C C4 GWJ . . . D 4 -0.903 -36.669 23.363 1 36.61 ? C4 GWJ 999 A 1 HETATM 6 C C5 GWJ . . . D 4 -0.981 -36.584 22.009 1 41.09 ? C5 GWJ 999 A 1 HETATM 7 CL CL GWJ . . . D 4 -0.117 -37.955 24.157 1 55.48 ? CL GWJ 999 A 1 HETATM 8 C C7 GWJ . . . D 4 -2.73 -33.621 24.611 1 48.47 ? C7 GWJ 999 A 1 HETATM 9 O O1 GWJ . . . D 4 -3.835 -33.2 24.363 1 54.86 ? O1 GWJ 999 A 1 HETATM 10 C C8 GWJ . . . D 4 -2.034 -33.117 25.844 1 58.29 ? C8 GWJ 999 A 1 HETATM 11 C C9 GWJ . . . D 4 -0.658 -32.83 25.752 1 63.18 ? C9 GWJ 999 A 1 HETATM 12 C C10 GWJ . . . D 4 0.054 -32.382 26.854 1 59.25 ? C10 GWJ 999 A 1 HETATM 13 C C11 GWJ . . . D 4 -0.59 -32.196 28.089 1 52.6 ? C11 GWJ 999 A 1 HETATM 14 C C12 GWJ . . . D 4 -1.97 -32.482 28.205 1 55.71 ? C12 GWJ 999 A 1 HETATM 15 C C13 GWJ . . . D 4 -2.702 -32.945 27.086 1 49.89 ? C13 GWJ 999 A 1 HETATM 16 CL CL1 GWJ . . . D 4 1.732 -32.061 26.666 1 73.14 ? CL1 GWJ 999 A 1 HETATM 17 O O2 GWJ . . . D 4 -2.875 -33.33 21.714 1 58.57 ? O2 GWJ 999 A 1 HETATM 18 C C15 GWJ . . . D 4 -3.485 -33.269 20.395 1 67.1 ? C15 GWJ 999 A 1 HETATM 19 C C16 GWJ . . . D 4 -4.861 -33.889 20.55 1 72.19 ? C16 GWJ 999 A 1 HETATM 20 O O3 GWJ . . . D 4 -5.355 -34.31 19.507 1 64.62 ? O3 GWJ 999 A 1 HETATM 21 N N1 GWJ . . . D 4 -5.46 -33.951 21.79 1 69.49 ? N1 GWJ 999 A 1 HETATM 22 C C17 GWJ . . . D 4 -6.58 -34.629 22.209 1 68.08 ? C17 GWJ 999 A 1 HETATM 23 C C18 GWJ . . . D 4 -7.481 -34.034 23.293 1 60.14 ? C18 GWJ 999 A 1 HETATM 24 C C23 GWJ . . . D 4 -7.197 -32.701 23.947 1 61.47 ? C23 GWJ 999 A 1 HETATM 25 C C19 GWJ . . . D 4 -8.573 -34.721 23.703 1 63.03 ? C19 GWJ 999 A 1 HETATM 26 C C20 GWJ . . . D 4 -8.931 -36.041 23.12 1 76.47 ? C20 GWJ 999 A 1 HETATM 27 C C21 GWJ . . . D 4 -8.134 -36.574 22.148 1 75.06 ? C21 GWJ 999 A 1 HETATM 28 C C22 GWJ . . . D 4 -6.935 -35.847 21.694 1 51 ? C22 GWJ 999 A 1 HETATM 29 N N3 GWJ . . . D 4 -11.228 -37.187 22.363 1 67.08 ? N3 GWJ 999 A 1 HETATM 30 S S GWJ . . . D 4 -10.363 -36.916 23.706 1 64.24 ? S GWJ 999 A 1 HETATM 31 O O4 GWJ . . . D 4 -11.139 -36.056 24.592 1 78.25 ? O4 GWJ 999 A 1 HETATM 32 O O5 GWJ . . . D 4 -9.949 -38.132 24.366 1 57.92 ? O5 GWJ 999 A 1 HETATM 33 C C26 GWJ . . . D 4 -2.611 -32.291 29.459 1 63.78 ? C26 GWJ 999 A 1 HETATM 34 N N2 GWJ . . . D 4 -3.112 -32.129 30.479 1 75.13 ? N2 GWJ 999 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #