data_3DP5
#
_model_server_result.job_id            R01Hfu8A8mKHUslVTlFoLQ 
_model_server_result.datetime_utc      '2025-04-15 00:01:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dp5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1}' 
#
_entry.id    3DP5 
#
_exptl.entry_id    3DP5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3DP5 
_cell.length_a            53.475 
_cell.length_b            40.125 
_cell.length_c            42.085 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DP5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 30 A CYS 35 1_555 C CAB HEC . A HEC 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? 
covale ? covale2 A SG CYS 33 A CYS 38 1_555 C CAC HEC . A HEC 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc1 A NE2 HIS 34 A HIS 39 1_555 C FE HEC . A HEC 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc2 A SD MET 74 A MET 79 1_555 C FE HEC . A HEC 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 374 n n 
S O2 SO4 doub 375 n n 
S O3 SO4 sing 376 n n 
S O4 SO4 sing 377 n n 
#
_atom_sites.entry_id                     3DP5 
_atom_sites.fract_transf_matrix[1][1]    0.0187 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024922 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023761 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 1 1 SO4 SO4 . 
C 3 HEC A 1 122 122 HEC HEM . 
D 4 HOH A 1 123 1 HOH HOH . 
D 4 HOH A 2 124 2 HOH HOH . 
D 4 HOH A 3 125 3 HOH HOH . 
D 4 HOH A 4 126 4 HOH HOH . 
D 4 HOH A 5 127 5 HOH HOH . 
D 4 HOH A 6 128 6 HOH HOH . 
D 4 HOH A 7 129 7 HOH HOH . 
D 4 HOH A 8 130 8 HOH HOH . 
D 4 HOH A 9 131 9 HOH HOH . 
D 4 HOH A 10 132 10 HOH HOH . 
D 4 HOH A 11 133 11 HOH HOH . 
D 4 HOH A 12 134 12 HOH HOH . 
D 4 HOH A 13 135 13 HOH HOH . 
D 4 HOH A 14 136 14 HOH HOH . 
D 4 HOH A 15 137 15 HOH HOH . 
D 4 HOH A 16 138 16 HOH HOH . 
D 4 HOH A 17 139 17 HOH HOH . 
D 4 HOH A 18 140 18 HOH HOH . 
D 4 HOH A 19 141 19 HOH HOH . 
D 4 HOH A 20 142 20 HOH HOH . 
D 4 HOH A 21 143 21 HOH HOH . 
D 4 HOH A 22 144 22 HOH HOH . 
D 4 HOH A 23 145 23 HOH HOH . 
D 4 HOH A 24 146 24 HOH HOH . 
D 4 HOH A 25 147 25 HOH HOH . 
D 4 HOH A 26 148 26 HOH HOH . 
D 4 HOH A 27 149 27 HOH HOH . 
D 4 HOH A 28 150 28 HOH HOH . 
D 4 HOH A 29 151 29 HOH HOH . 
D 4 HOH A 30 152 30 HOH HOH . 
D 4 HOH A 31 153 31 HOH HOH . 
D 4 HOH A 32 154 32 HOH HOH . 
D 4 HOH A 33 155 33 HOH HOH . 
D 4 HOH A 34 156 34 HOH HOH . 
D 4 HOH A 35 157 35 HOH HOH . 
D 4 HOH A 36 158 36 HOH HOH . 
D 4 HOH A 37 159 37 HOH HOH . 
D 4 HOH A 38 160 38 HOH HOH . 
D 4 HOH A 39 161 39 HOH HOH . 
D 4 HOH A 40 162 40 HOH HOH . 
D 4 HOH A 41 163 41 HOH HOH . 
D 4 HOH A 42 164 42 HOH HOH . 
D 4 HOH A 43 165 43 HOH HOH . 
D 4 HOH A 44 166 44 HOH HOH . 
D 4 HOH A 45 167 45 HOH HOH . 
D 4 HOH A 46 168 46 HOH HOH . 
D 4 HOH A 47 169 47 HOH HOH . 
D 4 HOH A 48 170 48 HOH HOH . 
D 4 HOH A 49 171 49 HOH HOH . 
D 4 HOH A 50 172 50 HOH HOH . 
D 4 HOH A 51 173 51 HOH HOH . 
D 4 HOH A 52 174 52 HOH HOH . 
D 4 HOH A 53 175 53 HOH HOH . 
D 4 HOH A 54 176 54 HOH HOH . 
D 4 HOH A 55 177 55 HOH HOH . 
D 4 HOH A 56 178 56 HOH HOH . 
D 4 HOH A 57 179 57 HOH HOH . 
D 4 HOH A 58 180 58 HOH HOH . 
D 4 HOH A 59 181 59 HOH HOH . 
D 4 HOH A 60 182 60 HOH HOH . 
D 4 HOH A 61 183 61 HOH HOH . 
D 4 HOH A 62 184 62 HOH HOH . 
D 4 HOH A 63 185 63 HOH HOH . 
D 4 HOH A 64 186 64 HOH HOH . 
D 4 HOH A 65 187 65 HOH HOH . 
D 4 HOH A 66 188 66 HOH HOH . 
D 4 HOH A 67 189 67 HOH HOH . 
D 4 HOH A 68 190 68 HOH HOH . 
D 4 HOH A 69 191 69 HOH HOH . 
D 4 HOH A 70 192 70 HOH HOH . 
D 4 HOH A 71 193 71 HOH HOH . 
D 4 HOH A 72 194 72 HOH HOH . 
D 4 HOH A 73 195 73 HOH HOH . 
D 4 HOH A 74 196 74 HOH HOH . 
D 4 HOH A 75 197 75 HOH HOH . 
D 4 HOH A 76 198 76 HOH HOH . 
D 4 HOH A 77 199 77 HOH HOH . 
D 4 HOH A 78 200 78 HOH HOH . 
D 4 HOH A 79 202 80 HOH HOH . 
D 4 HOH A 80 203 81 HOH HOH . 
D 4 HOH A 81 204 82 HOH HOH . 
D 4 HOH A 82 205 83 HOH HOH . 
D 4 HOH A 83 206 84 HOH HOH . 
D 4 HOH A 84 207 85 HOH HOH . 
D 4 HOH A 85 208 86 HOH HOH . 
D 4 HOH A 86 209 87 HOH HOH . 
D 4 HOH A 87 210 88 HOH HOH . 
D 4 HOH A 88 211 89 HOH HOH . 
D 4 HOH A 89 212 90 HOH HOH . 
D 4 HOH A 90 213 91 HOH HOH . 
D 4 HOH A 91 215 93 HOH HOH . 
D 4 HOH A 92 216 94 HOH HOH . 
D 4 HOH A 93 217 95 HOH HOH . 
D 4 HOH A 94 218 96 HOH HOH . 
D 4 HOH A 95 219 97 HOH HOH . 
D 4 HOH A 96 221 99 HOH HOH . 
D 4 HOH A 97 222 100 HOH HOH . 
D 4 HOH A 98 223 101 HOH HOH . 
D 4 HOH A 99 224 102 HOH HOH . 
D 4 HOH A 100 225 103 HOH HOH . 
D 4 HOH A 101 226 104 HOH HOH . 
D 4 HOH A 102 227 105 HOH HOH . 
D 4 HOH A 103 228 106 HOH HOH . 
D 4 HOH A 104 229 107 HOH HOH . 
D 4 HOH A 105 230 108 HOH HOH . 
D 4 HOH A 106 231 109 HOH HOH . 
D 4 HOH A 107 232 110 HOH HOH . 
D 4 HOH A 108 233 111 HOH HOH . 
D 4 HOH A 109 234 112 HOH HOH . 
D 4 HOH A 110 235 113 HOH HOH . 
D 4 HOH A 111 236 114 HOH HOH . 
D 4 HOH A 112 237 115 HOH HOH . 
D 4 HOH A 113 238 116 HOH HOH . 
D 4 HOH A 114 239 117 HOH HOH . 
D 4 HOH A 115 240 118 HOH HOH . 
D 4 HOH A 116 241 119 HOH HOH . 
D 4 HOH A 117 242 120 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . B 2 28.379 6.632 35.007 1 53.38 ? S SO4 1 A 1 
HETATM 2 O O1 SO4 . . . B 2 29.168 6.025 33.928 1 53.33 ? O1 SO4 1 A 1 
HETATM 3 O O2 SO4 . . . B 2 27.388 7.51 34.4 1 54.08 ? O2 SO4 1 A 1 
HETATM 4 O O3 SO4 . . . B 2 27.689 5.633 35.804 1 53.04 ? O3 SO4 1 A 1 
HETATM 5 O O4 SO4 . . . B 2 29.243 7.401 35.886 1 54.77 ? O4 SO4 1 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#