data_3DQX
#
_model_server_result.job_id            CznglMEYBDSv6lXJ76AlBQ 
_model_server_result.datetime_utc      '2024-11-22 09:19:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3dqx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2}' 
#
_entry.id    3DQX 
#
_exptl.entry_id    3DQX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.36 
_cell.angle_gamma         90 
_cell.entry_id            3DQX 
_cell.length_a            42.507 
_cell.length_b            119.15 
_cell.length_c            63.676 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DQX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 13 n n 
P O2P AMP sing 14 n n 
P O3P AMP sing 15 n n 
P O5' AMP sing 16 n n 
O2P HOP2 AMP sing 17 n n 
O3P HOP3 AMP sing 18 n n 
O5' C5' AMP sing 19 n n 
C5' C4' AMP sing 20 n n 
C5' "H5'1" AMP sing 21 n n 
C5' "H5'2" AMP sing 22 n n 
C4' O4' AMP sing 23 n n 
C4' C3' AMP sing 24 n n 
C4' H4' AMP sing 25 n n 
O4' C1' AMP sing 26 n n 
C3' O3' AMP sing 27 n n 
C3' C2' AMP sing 28 n n 
C3' H3' AMP sing 29 n n 
O3' HO3' AMP sing 30 n n 
C2' O2' AMP sing 31 n n 
C2' C1' AMP sing 32 n n 
C2' H2' AMP sing 33 n n 
O2' HO2' AMP sing 34 n n 
C1' N9 AMP sing 35 n n 
C1' H1' AMP sing 36 n n 
N9 C8 AMP sing 37 n y 
N9 C4 AMP sing 38 n y 
C8 N7 AMP doub 39 n y 
C8 H8 AMP sing 40 n n 
N7 C5 AMP sing 41 n y 
C5 C6 AMP sing 42 n y 
C5 C4 AMP doub 43 n y 
C6 N6 AMP sing 44 n n 
C6 N1 AMP doub 45 n y 
N6 HN61 AMP sing 46 n n 
N6 HN62 AMP sing 47 n n 
N1 C2 AMP sing 48 n y 
C2 N3 AMP doub 49 n y 
C2 H2 AMP sing 50 n n 
N3 C4 AMP sing 51 n y 
#
_atom_sites.entry_id                     3DQX 
_atom_sites.fract_transf_matrix[1][1]    0.023526 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000148 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008393 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015705 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 AMP A 1 1 1 AMP AMP . 
D 2 AMP B 1 2 2 AMP AMP . 
E 3 HOH A 1 3 3 HOH HOH . 
E 3 HOH A 2 5 5 HOH HOH . 
E 3 HOH A 3 6 6 HOH HOH . 
E 3 HOH A 4 8 8 HOH HOH . 
E 3 HOH A 5 9 9 HOH HOH . 
E 3 HOH A 6 12 12 HOH HOH . 
E 3 HOH A 7 14 14 HOH HOH . 
E 3 HOH A 8 15 15 HOH HOH . 
E 3 HOH A 9 18 18 HOH HOH . 
E 3 HOH A 10 19 19 HOH HOH . 
E 3 HOH A 11 23 23 HOH HOH . 
E 3 HOH A 12 26 26 HOH HOH . 
E 3 HOH A 13 28 28 HOH HOH . 
E 3 HOH A 14 31 31 HOH HOH . 
E 3 HOH A 15 32 32 HOH HOH . 
E 3 HOH A 16 33 33 HOH HOH . 
E 3 HOH A 17 35 35 HOH HOH . 
E 3 HOH A 18 36 36 HOH HOH . 
E 3 HOH A 19 37 37 HOH HOH . 
E 3 HOH A 20 43 43 HOH HOH . 
E 3 HOH A 21 46 46 HOH HOH . 
E 3 HOH A 22 48 48 HOH HOH . 
E 3 HOH A 23 49 49 HOH HOH . 
E 3 HOH A 24 51 51 HOH HOH . 
E 3 HOH A 25 52 52 HOH HOH . 
E 3 HOH A 26 54 54 HOH HOH . 
E 3 HOH A 27 58 58 HOH HOH . 
E 3 HOH A 28 61 61 HOH HOH . 
E 3 HOH A 29 63 63 HOH HOH . 
E 3 HOH A 30 64 64 HOH HOH . 
E 3 HOH A 31 65 65 HOH HOH . 
E 3 HOH A 32 66 66 HOH HOH . 
E 3 HOH A 33 67 67 HOH HOH . 
E 3 HOH A 34 70 70 HOH HOH . 
E 3 HOH A 35 73 73 HOH HOH . 
E 3 HOH A 36 79 79 HOH HOH . 
E 3 HOH A 37 82 82 HOH HOH . 
E 3 HOH A 38 85 85 HOH HOH . 
E 3 HOH A 39 87 87 HOH HOH . 
E 3 HOH A 40 88 88 HOH HOH . 
E 3 HOH A 41 92 92 HOH HOH . 
E 3 HOH A 42 94 94 HOH HOH . 
E 3 HOH A 43 95 95 HOH HOH . 
E 3 HOH A 44 96 96 HOH HOH . 
E 3 HOH A 45 97 97 HOH HOH . 
E 3 HOH A 46 99 99 HOH HOH . 
E 3 HOH A 47 101 101 HOH HOH . 
E 3 HOH A 48 104 104 HOH HOH . 
E 3 HOH A 49 105 105 HOH HOH . 
E 3 HOH A 50 109 109 HOH HOH . 
E 3 HOH A 51 115 115 HOH HOH . 
E 3 HOH A 52 116 116 HOH HOH . 
E 3 HOH A 53 117 117 HOH HOH . 
E 3 HOH A 54 118 118 HOH HOH . 
E 3 HOH A 55 120 120 HOH HOH . 
E 3 HOH A 56 124 124 HOH HOH . 
E 3 HOH A 57 125 125 HOH HOH . 
E 3 HOH A 58 126 126 HOH HOH . 
E 3 HOH A 59 127 127 HOH HOH . 
E 3 HOH A 60 128 128 HOH HOH . 
E 3 HOH A 61 129 129 HOH HOH . 
E 3 HOH A 62 132 132 HOH HOH . 
E 3 HOH A 63 135 135 HOH HOH . 
E 3 HOH A 64 139 139 HOH HOH . 
E 3 HOH A 65 140 140 HOH HOH . 
E 3 HOH A 66 143 143 HOH HOH . 
E 3 HOH A 67 152 152 HOH HOH . 
E 3 HOH A 68 156 156 HOH HOH . 
E 3 HOH A 69 157 157 HOH HOH . 
E 3 HOH A 70 158 158 HOH HOH . 
E 3 HOH A 71 159 159 HOH HOH . 
E 3 HOH A 72 160 160 HOH HOH . 
E 3 HOH A 73 161 161 HOH HOH . 
E 3 HOH A 74 162 162 HOH HOH . 
E 3 HOH A 75 163 163 HOH HOH . 
E 3 HOH A 76 164 164 HOH HOH . 
E 3 HOH A 77 166 166 HOH HOH . 
E 3 HOH A 78 167 167 HOH HOH . 
E 3 HOH A 79 169 169 HOH HOH . 
E 3 HOH A 80 170 170 HOH HOH . 
E 3 HOH A 81 171 171 HOH HOH . 
E 3 HOH A 82 172 172 HOH HOH . 
E 3 HOH A 83 174 174 HOH HOH . 
E 3 HOH A 84 177 177 HOH HOH . 
E 3 HOH A 85 178 178 HOH HOH . 
E 3 HOH A 86 182 182 HOH HOH . 
E 3 HOH A 87 184 184 HOH HOH . 
E 3 HOH A 88 185 185 HOH HOH . 
E 3 HOH A 89 187 187 HOH HOH . 
E 3 HOH A 90 188 188 HOH HOH . 
E 3 HOH A 91 189 189 HOH HOH . 
E 3 HOH A 92 190 190 HOH HOH . 
E 3 HOH A 93 191 191 HOH HOH . 
E 3 HOH A 94 192 192 HOH HOH . 
F 3 HOH B 1 534 534 HOH HOH . 
F 3 HOH B 2 535 535 HOH HOH . 
F 3 HOH B 3 536 536 HOH HOH . 
F 3 HOH B 4 537 537 HOH HOH . 
F 3 HOH B 5 538 538 HOH HOH . 
F 3 HOH B 6 539 539 HOH HOH . 
F 3 HOH B 7 540 540 HOH HOH . 
F 3 HOH B 8 541 541 HOH HOH . 
F 3 HOH B 9 542 542 HOH HOH . 
F 3 HOH B 10 543 543 HOH HOH . 
F 3 HOH B 11 544 544 HOH HOH . 
F 3 HOH B 12 545 545 HOH HOH . 
F 3 HOH B 13 546 546 HOH HOH . 
F 3 HOH B 14 547 547 HOH HOH . 
F 3 HOH B 15 548 548 HOH HOH . 
F 3 HOH B 16 549 549 HOH HOH . 
F 3 HOH B 17 550 550 HOH HOH . 
F 3 HOH B 18 551 551 HOH HOH . 
F 3 HOH B 19 552 552 HOH HOH . 
F 3 HOH B 20 553 553 HOH HOH . 
F 3 HOH B 21 554 554 HOH HOH . 
F 3 HOH B 22 555 555 HOH HOH . 
F 3 HOH B 23 556 556 HOH HOH . 
F 3 HOH B 24 557 557 HOH HOH . 
F 3 HOH B 25 558 558 HOH HOH . 
F 3 HOH B 26 559 559 HOH HOH . 
F 3 HOH B 27 560 560 HOH HOH . 
F 3 HOH B 28 561 561 HOH HOH . 
F 3 HOH B 29 562 562 HOH HOH . 
F 3 HOH B 30 563 563 HOH HOH . 
F 3 HOH B 31 564 564 HOH HOH . 
F 3 HOH B 32 565 565 HOH HOH . 
F 3 HOH B 33 566 566 HOH HOH . 
F 3 HOH B 34 567 567 HOH HOH . 
F 3 HOH B 35 568 568 HOH HOH . 
F 3 HOH B 36 569 569 HOH HOH . 
F 3 HOH B 37 570 570 HOH HOH . 
F 3 HOH B 38 571 571 HOH HOH . 
F 3 HOH B 39 572 572 HOH HOH . 
F 3 HOH B 40 573 573 HOH HOH . 
F 3 HOH B 41 574 574 HOH HOH . 
F 3 HOH B 42 575 575 HOH HOH . 
F 3 HOH B 43 576 576 HOH HOH . 
F 3 HOH B 44 577 577 HOH HOH . 
F 3 HOH B 45 578 578 HOH HOH . 
F 3 HOH B 46 579 579 HOH HOH . 
F 3 HOH B 47 580 580 HOH HOH . 
F 3 HOH B 48 581 581 HOH HOH . 
F 3 HOH B 49 582 582 HOH HOH . 
F 3 HOH B 50 583 583 HOH HOH . 
F 3 HOH B 51 584 584 HOH HOH . 
F 3 HOH B 52 585 585 HOH HOH . 
F 3 HOH B 53 586 586 HOH HOH . 
F 3 HOH B 54 587 587 HOH HOH . 
F 3 HOH B 55 588 588 HOH HOH . 
F 3 HOH B 56 589 589 HOH HOH . 
F 3 HOH B 57 590 590 HOH HOH . 
F 3 HOH B 58 591 591 HOH HOH . 
F 3 HOH B 59 592 592 HOH HOH . 
F 3 HOH B 60 593 593 HOH HOH . 
F 3 HOH B 61 594 594 HOH HOH . 
F 3 HOH B 62 595 595 HOH HOH . 
F 3 HOH B 63 596 596 HOH HOH . 
F 3 HOH B 64 597 597 HOH HOH . 
F 3 HOH B 65 598 598 HOH HOH . 
F 3 HOH B 66 599 599 HOH HOH . 
F 3 HOH B 67 600 600 HOH HOH . 
F 3 HOH B 68 601 601 HOH HOH . 
F 3 HOH B 69 602 602 HOH HOH . 
F 3 HOH B 70 603 603 HOH HOH . 
F 3 HOH B 71 604 604 HOH HOH . 
F 3 HOH B 72 605 605 HOH HOH . 
F 3 HOH B 73 606 606 HOH HOH . 
F 3 HOH B 74 607 607 HOH HOH . 
F 3 HOH B 75 608 608 HOH HOH . 
F 3 HOH B 76 609 609 HOH HOH . 
F 3 HOH B 77 610 610 HOH HOH . 
F 3 HOH B 78 611 611 HOH HOH . 
F 3 HOH B 79 612 612 HOH HOH . 
F 3 HOH B 80 613 613 HOH HOH . 
F 3 HOH B 81 614 614 HOH HOH . 
F 3 HOH B 82 615 615 HOH HOH . 
F 3 HOH B 83 616 616 HOH HOH . 
F 3 HOH B 84 617 617 HOH HOH . 
F 3 HOH B 85 618 618 HOH HOH . 
F 3 HOH B 86 619 619 HOH HOH . 
F 3 HOH B 87 620 620 HOH HOH . 
F 3 HOH B 88 621 621 HOH HOH . 
F 3 HOH B 89 622 622 HOH HOH . 
F 3 HOH B 90 623 623 HOH HOH . 
F 3 HOH B 91 624 624 HOH HOH . 
F 3 HOH B 92 625 625 HOH HOH . 
F 3 HOH B 93 626 626 HOH HOH . 
F 3 HOH B 94 627 627 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . D 2 -3.71 -41.403 -70.698 1 88.68 ? P AMP 2 B 1 
HETATM 2 O O1P AMP . . . D 2 -3.007 -40.275 -69.772 1 89.28 ? O1P AMP 2 B 1 
HETATM 3 O O2P AMP . . . D 2 -2.722 -42.148 -71.536 1 89.34 ? O2P AMP 2 B 1 
HETATM 4 O O3P AMP . . . D 2 -4.475 -42.372 -69.641 1 88.72 ? O3P AMP 2 B 1 
HETATM 5 O O5' AMP . . . D 2 -4.83 -40.602 -71.574 1 86.54 ? O5' AMP 2 B 1 
HETATM 6 C C5' AMP . . . D 2 -5.944 -41.282 -72.176 1 82.48 ? C5' AMP 2 B 1 
HETATM 7 C C4' AMP . . . D 2 -7.269 -40.481 -72.076 1 79.58 ? C4' AMP 2 B 1 
HETATM 8 O O4' AMP . . . D 2 -8.344 -41.456 -71.855 1 77.2 ? O4' AMP 2 B 1 
HETATM 9 C C3' AMP . . . D 2 -7.34 -39.485 -70.9 1 77.93 ? C3' AMP 2 B 1 
HETATM 10 O O3' AMP . . . D 2 -6.985 -38.162 -71.342 1 78.25 ? O3' AMP 2 B 1 
HETATM 11 C C2' AMP . . . D 2 -8.813 -39.556 -70.482 1 76.48 ? C2' AMP 2 B 1 
HETATM 12 O O2' AMP . . . D 2 -9.645 -38.734 -71.327 1 75.39 ? O2' AMP 2 B 1 
HETATM 13 C C1' AMP . . . D 2 -9.146 -41.039 -70.712 1 74.98 ? C1' AMP 2 B 1 
HETATM 14 N N9 AMP . . . D 2 -8.859 -41.951 -69.54 1 71.53 ? N9 AMP 2 B 1 
HETATM 15 C C8 AMP . . . D 2 -7.666 -42.449 -69.195 1 70.91 ? C8 AMP 2 B 1 
HETATM 16 N N7 AMP . . . D 2 -7.787 -43.228 -68.121 1 69.72 ? N7 AMP 2 B 1 
HETATM 17 C C5 AMP . . . D 2 -9.073 -43.228 -67.772 1 69.3 ? C5 AMP 2 B 1 
HETATM 18 C C6 AMP . . . D 2 -9.781 -43.841 -66.738 1 68.76 ? C6 AMP 2 B 1 
HETATM 19 N N6 AMP . . . D 2 -9.139 -44.619 -65.85 1 67.85 ? N6 AMP 2 B 1 
HETATM 20 N N1 AMP . . . D 2 -11.109 -43.626 -66.651 1 67.45 ? N1 AMP 2 B 1 
HETATM 21 C C2 AMP . . . D 2 -11.725 -42.854 -67.538 1 67.8 ? C2 AMP 2 B 1 
HETATM 22 N N3 AMP . . . D 2 -11.081 -42.251 -68.531 1 68.29 ? N3 AMP 2 B 1 
HETATM 23 C C4 AMP . . . D 2 -9.755 -42.417 -68.671 1 69.66 ? C4 AMP 2 B 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           23 
#