data_3DRN
#
_model_server_result.job_id            ahfFRJrVNwol-pi66DJANg 
_model_server_result.datetime_utc      '2025-04-22 05:52:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3drn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":600}' 
#
_entry.id    3DRN 
#
_exptl.entry_id    3DRN 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.74 
_cell.angle_gamma         90 
_cell.entry_id            3DRN 
_cell.length_a            42.841 
_cell.length_b            91.829 
_cell.length_c            52.542 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DRN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,G 1 1 
B,D,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 70 n n 
C1 O2 CIT sing 71 n n 
C1 C2 CIT sing 72 n n 
O2 HO2 CIT sing 73 n n 
C2 C3 CIT sing 74 n n 
C2 H21 CIT sing 75 n n 
C2 H22 CIT sing 76 n n 
C3 O7 CIT sing 77 n n 
C3 C4 CIT sing 78 n n 
C3 C6 CIT sing 79 n n 
O7 HO7 CIT sing 80 n n 
C4 C5 CIT sing 81 n n 
C4 H41 CIT sing 82 n n 
C4 H42 CIT sing 83 n n 
C5 O3 CIT doub 84 n n 
C5 O4 CIT sing 85 n n 
O4 HO4 CIT sing 86 n n 
C6 O5 CIT doub 87 n n 
C6 O6 CIT sing 88 n n 
O6 HO6 CIT sing 89 n n 
#
_atom_sites.entry_id                     3DRN 
_atom_sites.fract_transf_matrix[1][1]    0.023342 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002346 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01089 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019128 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CIT A 1 500 500 CIT CIT . 
D 2 CIT B 1 600 600 CIT CIT . 
E 3 GOL B 1 700 700 GOL GOL . 
F 3 GOL B 1 701 701 GOL GOL . 
G 4 HOH A 1 501 1 HOH HOH . 
G 4 HOH A 2 502 2 HOH HOH . 
G 4 HOH A 3 503 3 HOH HOH . 
G 4 HOH A 4 504 8 HOH HOH . 
G 4 HOH A 5 505 9 HOH HOH . 
G 4 HOH A 6 506 10 HOH HOH . 
G 4 HOH A 7 507 12 HOH HOH . 
G 4 HOH A 8 508 19 HOH HOH . 
G 4 HOH A 9 509 21 HOH HOH . 
G 4 HOH A 10 510 22 HOH HOH . 
G 4 HOH A 11 511 25 HOH HOH . 
G 4 HOH A 12 512 27 HOH HOH . 
G 4 HOH A 13 513 31 HOH HOH . 
G 4 HOH A 14 514 33 HOH HOH . 
G 4 HOH A 15 515 37 HOH HOH . 
G 4 HOH A 16 516 38 HOH HOH . 
G 4 HOH A 17 517 40 HOH HOH . 
G 4 HOH A 18 518 42 HOH HOH . 
G 4 HOH A 19 519 43 HOH HOH . 
G 4 HOH A 20 520 45 HOH HOH . 
G 4 HOH A 21 521 47 HOH HOH . 
G 4 HOH A 22 522 48 HOH HOH . 
G 4 HOH A 23 523 49 HOH HOH . 
G 4 HOH A 24 524 50 HOH HOH . 
G 4 HOH A 25 525 58 HOH HOH . 
G 4 HOH A 26 526 63 HOH HOH . 
G 4 HOH A 27 527 65 HOH HOH . 
G 4 HOH A 28 528 68 HOH HOH . 
G 4 HOH A 29 529 72 HOH HOH . 
G 4 HOH A 30 530 73 HOH HOH . 
G 4 HOH A 31 531 75 HOH HOH . 
G 4 HOH A 32 532 80 HOH HOH . 
G 4 HOH A 33 533 83 HOH HOH . 
G 4 HOH A 34 534 84 HOH HOH . 
G 4 HOH A 35 535 85 HOH HOH . 
G 4 HOH A 36 536 87 HOH HOH . 
G 4 HOH A 37 537 89 HOH HOH . 
G 4 HOH A 38 538 90 HOH HOH . 
G 4 HOH A 39 539 91 HOH HOH . 
G 4 HOH A 40 540 93 HOH HOH . 
G 4 HOH A 41 541 94 HOH HOH . 
G 4 HOH A 42 542 96 HOH HOH . 
G 4 HOH A 43 543 97 HOH HOH . 
G 4 HOH A 44 544 99 HOH HOH . 
G 4 HOH A 45 545 103 HOH HOH . 
G 4 HOH A 46 546 106 HOH HOH . 
G 4 HOH A 47 547 107 HOH HOH . 
G 4 HOH A 48 548 112 HOH HOH . 
G 4 HOH A 49 549 113 HOH HOH . 
G 4 HOH A 50 550 114 HOH HOH . 
G 4 HOH A 51 551 115 HOH HOH . 
G 4 HOH A 52 552 117 HOH HOH . 
G 4 HOH A 53 553 118 HOH HOH . 
G 4 HOH A 54 554 123 HOH HOH . 
G 4 HOH A 55 555 124 HOH HOH . 
G 4 HOH A 56 556 125 HOH HOH . 
G 4 HOH A 57 557 126 HOH HOH . 
G 4 HOH A 58 558 129 HOH HOH . 
G 4 HOH A 59 559 130 HOH HOH . 
G 4 HOH A 60 560 134 HOH HOH . 
G 4 HOH A 61 561 135 HOH HOH . 
G 4 HOH A 62 562 136 HOH HOH . 
G 4 HOH A 63 563 140 HOH HOH . 
G 4 HOH A 64 564 141 HOH HOH . 
G 4 HOH A 65 565 142 HOH HOH . 
G 4 HOH A 66 566 145 HOH HOH . 
G 4 HOH A 67 567 147 HOH HOH . 
G 4 HOH A 68 568 148 HOH HOH . 
G 4 HOH A 69 569 149 HOH HOH . 
G 4 HOH A 70 570 150 HOH HOH . 
G 4 HOH A 71 571 153 HOH HOH . 
G 4 HOH A 72 572 154 HOH HOH . 
G 4 HOH A 73 573 158 HOH HOH . 
G 4 HOH A 74 574 160 HOH HOH . 
G 4 HOH A 75 575 164 HOH HOH . 
G 4 HOH A 76 576 166 HOH HOH . 
G 4 HOH A 77 577 167 HOH HOH . 
G 4 HOH A 78 578 168 HOH HOH . 
G 4 HOH A 79 579 170 HOH HOH . 
G 4 HOH A 80 580 171 HOH HOH . 
G 4 HOH A 81 581 174 HOH HOH . 
G 4 HOH A 82 582 175 HOH HOH . 
G 4 HOH A 83 583 184 HOH HOH . 
G 4 HOH A 84 584 188 HOH HOH . 
G 4 HOH A 85 585 189 HOH HOH . 
G 4 HOH A 86 586 190 HOH HOH . 
G 4 HOH A 87 587 191 HOH HOH . 
G 4 HOH A 88 588 193 HOH HOH . 
G 4 HOH A 89 589 194 HOH HOH . 
G 4 HOH A 90 590 195 HOH HOH . 
G 4 HOH A 91 591 196 HOH HOH . 
G 4 HOH A 92 592 207 HOH HOH . 
G 4 HOH A 93 593 209 HOH HOH . 
G 4 HOH A 94 594 212 HOH HOH . 
G 4 HOH A 95 595 213 HOH HOH . 
G 4 HOH A 96 596 215 HOH HOH . 
G 4 HOH A 97 597 216 HOH HOH . 
G 4 HOH A 98 598 217 HOH HOH . 
G 4 HOH A 99 599 219 HOH HOH . 
G 4 HOH A 100 600 220 HOH HOH . 
G 4 HOH A 101 601 222 HOH HOH . 
G 4 HOH A 102 602 223 HOH HOH . 
G 4 HOH A 103 603 225 HOH HOH . 
G 4 HOH A 104 604 226 HOH HOH . 
G 4 HOH A 105 605 227 HOH HOH . 
G 4 HOH A 106 606 228 HOH HOH . 
G 4 HOH A 107 607 230 HOH HOH . 
G 4 HOH A 108 608 231 HOH HOH . 
H 4 HOH B 1 702 4 HOH HOH . 
H 4 HOH B 2 703 5 HOH HOH . 
H 4 HOH B 3 704 6 HOH HOH . 
H 4 HOH B 4 705 7 HOH HOH . 
H 4 HOH B 5 706 11 HOH HOH . 
H 4 HOH B 6 707 13 HOH HOH . 
H 4 HOH B 7 708 14 HOH HOH . 
H 4 HOH B 8 709 15 HOH HOH . 
H 4 HOH B 9 710 16 HOH HOH . 
H 4 HOH B 10 711 17 HOH HOH . 
H 4 HOH B 11 712 18 HOH HOH . 
H 4 HOH B 12 713 20 HOH HOH . 
H 4 HOH B 13 714 23 HOH HOH . 
H 4 HOH B 14 715 24 HOH HOH . 
H 4 HOH B 15 716 26 HOH HOH . 
H 4 HOH B 16 717 28 HOH HOH . 
H 4 HOH B 17 718 29 HOH HOH . 
H 4 HOH B 18 719 30 HOH HOH . 
H 4 HOH B 19 720 32 HOH HOH . 
H 4 HOH B 20 721 34 HOH HOH . 
H 4 HOH B 21 722 35 HOH HOH . 
H 4 HOH B 22 723 36 HOH HOH . 
H 4 HOH B 23 724 39 HOH HOH . 
H 4 HOH B 24 725 41 HOH HOH . 
H 4 HOH B 25 726 44 HOH HOH . 
H 4 HOH B 26 727 46 HOH HOH . 
H 4 HOH B 27 728 51 HOH HOH . 
H 4 HOH B 28 729 52 HOH HOH . 
H 4 HOH B 29 730 53 HOH HOH . 
H 4 HOH B 30 731 54 HOH HOH . 
H 4 HOH B 31 732 55 HOH HOH . 
H 4 HOH B 32 733 56 HOH HOH . 
H 4 HOH B 33 734 57 HOH HOH . 
H 4 HOH B 34 735 59 HOH HOH . 
H 4 HOH B 35 736 60 HOH HOH . 
H 4 HOH B 36 737 61 HOH HOH . 
H 4 HOH B 37 738 62 HOH HOH . 
H 4 HOH B 38 739 64 HOH HOH . 
H 4 HOH B 39 740 66 HOH HOH . 
H 4 HOH B 40 741 67 HOH HOH . 
H 4 HOH B 41 742 69 HOH HOH . 
H 4 HOH B 42 743 70 HOH HOH . 
H 4 HOH B 43 744 71 HOH HOH . 
H 4 HOH B 44 745 74 HOH HOH . 
H 4 HOH B 45 746 76 HOH HOH . 
H 4 HOH B 46 747 77 HOH HOH . 
H 4 HOH B 47 748 78 HOH HOH . 
H 4 HOH B 48 749 79 HOH HOH . 
H 4 HOH B 49 750 81 HOH HOH . 
H 4 HOH B 50 751 82 HOH HOH . 
H 4 HOH B 51 752 86 HOH HOH . 
H 4 HOH B 52 753 88 HOH HOH . 
H 4 HOH B 53 754 92 HOH HOH . 
H 4 HOH B 54 755 95 HOH HOH . 
H 4 HOH B 55 756 98 HOH HOH . 
H 4 HOH B 56 757 100 HOH HOH . 
H 4 HOH B 57 758 101 HOH HOH . 
H 4 HOH B 58 759 102 HOH HOH . 
H 4 HOH B 59 760 104 HOH HOH . 
H 4 HOH B 60 761 105 HOH HOH . 
H 4 HOH B 61 762 108 HOH HOH . 
H 4 HOH B 62 763 109 HOH HOH . 
H 4 HOH B 63 764 110 HOH HOH . 
H 4 HOH B 64 765 111 HOH HOH . 
H 4 HOH B 65 766 116 HOH HOH . 
H 4 HOH B 66 767 119 HOH HOH . 
H 4 HOH B 67 768 120 HOH HOH . 
H 4 HOH B 68 769 121 HOH HOH . 
H 4 HOH B 69 770 122 HOH HOH . 
H 4 HOH B 70 771 127 HOH HOH . 
H 4 HOH B 71 772 128 HOH HOH . 
H 4 HOH B 72 773 131 HOH HOH . 
H 4 HOH B 73 774 132 HOH HOH . 
H 4 HOH B 74 775 133 HOH HOH . 
H 4 HOH B 75 776 137 HOH HOH . 
H 4 HOH B 76 777 138 HOH HOH . 
H 4 HOH B 77 778 139 HOH HOH . 
H 4 HOH B 78 779 143 HOH HOH . 
H 4 HOH B 79 780 144 HOH HOH . 
H 4 HOH B 80 781 146 HOH HOH . 
H 4 HOH B 81 782 151 HOH HOH . 
H 4 HOH B 82 783 152 HOH HOH . 
H 4 HOH B 83 784 155 HOH HOH . 
H 4 HOH B 84 785 156 HOH HOH . 
H 4 HOH B 85 786 157 HOH HOH . 
H 4 HOH B 86 787 159 HOH HOH . 
H 4 HOH B 87 788 161 HOH HOH . 
H 4 HOH B 88 789 162 HOH HOH . 
H 4 HOH B 89 790 163 HOH HOH . 
H 4 HOH B 90 791 165 HOH HOH . 
H 4 HOH B 91 792 169 HOH HOH . 
H 4 HOH B 92 793 172 HOH HOH . 
H 4 HOH B 93 794 173 HOH HOH . 
H 4 HOH B 94 795 176 HOH HOH . 
H 4 HOH B 95 796 177 HOH HOH . 
H 4 HOH B 96 797 178 HOH HOH . 
H 4 HOH B 97 798 179 HOH HOH . 
H 4 HOH B 98 799 180 HOH HOH . 
H 4 HOH B 99 800 181 HOH HOH . 
H 4 HOH B 100 801 182 HOH HOH . 
H 4 HOH B 101 802 183 HOH HOH . 
H 4 HOH B 102 803 185 HOH HOH . 
H 4 HOH B 103 804 186 HOH HOH . 
H 4 HOH B 104 805 187 HOH HOH . 
H 4 HOH B 105 806 192 HOH HOH . 
H 4 HOH B 106 807 197 HOH HOH . 
H 4 HOH B 107 808 198 HOH HOH . 
H 4 HOH B 108 809 199 HOH HOH . 
H 4 HOH B 109 810 200 HOH HOH . 
H 4 HOH B 110 811 201 HOH HOH . 
H 4 HOH B 111 812 202 HOH HOH . 
H 4 HOH B 112 813 203 HOH HOH . 
H 4 HOH B 113 814 204 HOH HOH . 
H 4 HOH B 114 815 205 HOH HOH . 
H 4 HOH B 115 816 206 HOH HOH . 
H 4 HOH B 116 817 208 HOH HOH . 
H 4 HOH B 117 818 210 HOH HOH . 
H 4 HOH B 118 819 211 HOH HOH . 
H 4 HOH B 119 820 214 HOH HOH . 
H 4 HOH B 120 821 218 HOH HOH . 
H 4 HOH B 121 822 221 HOH HOH . 
H 4 HOH B 122 823 224 HOH HOH . 
H 4 HOH B 123 824 229 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . D 2 29.769 30.743 19.426 0.67 44.95 ? C1 CIT 600 B 1 
HETATM 2 O O1 CIT . . . D 2 30.404 30.191 18.57 0.67 44.34 ? O1 CIT 600 B 1 
HETATM 3 O O2 CIT . . . D 2 30.054 32.011 19.743 0.67 44 ? O2 CIT 600 B 1 
HETATM 4 C C2 CIT . . . D 2 28.649 30.005 20.143 0.67 46.82 ? C2 CIT 600 B 1 
HETATM 5 C C3 CIT . . . D 2 29.186 29.213 21.367 0.67 48.75 ? C3 CIT 600 B 1 
HETATM 6 O O7 CIT . . . D 2 29.946 30.116 22.185 0.67 49.45 ? O7 CIT 600 B 1 
HETATM 7 C C4 CIT . . . D 2 28.018 28.658 22.235 0.67 50.4 ? C4 CIT 600 B 1 
HETATM 8 C C5 CIT . . . D 2 27.202 27.56 21.561 0.67 53.32 ? C5 CIT 600 B 1 
HETATM 9 O O3 CIT . . . D 2 27.48 26.398 21.75 0.67 55.24 ? O3 CIT 600 B 1 
HETATM 10 O O4 CIT . . . D 2 26.168 27.874 20.768 0.67 55.94 ? O4 CIT 600 B 1 
HETATM 11 C C6 CIT . . . D 2 30.115 28.078 20.901 0.67 48.15 ? C6 CIT 600 B 1 
HETATM 12 O O5 CIT . . . D 2 31.188 27.913 21.427 0.67 47.72 ? O5 CIT 600 B 1 
HETATM 13 O O6 CIT . . . D 2 29.745 27.264 19.894 0.67 46.73 ? O6 CIT 600 B 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           13 
#