data_3DRQ
#
_model_server_result.job_id            764i1sCVIFieUMSmQu9oVQ 
_model_server_result.datetime_utc      '2024-10-12 12:27:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3drq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":3731}' 
#
_entry.id    3DRQ 
#
_exptl.entry_id    3DRQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3DRQ 
_cell.length_a            63.5 
_cell.length_b            76.6 
_cell.length_c            94.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3DRQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 134 A CYS 134 1_555 A SG CYS 194 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 97 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 B SG CYS 159 B CYS 140 1_555 B SG CYS 215 B CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 150 n n 
C1 C2 GOL sing 151 n n 
C1 H11 GOL sing 152 n n 
C1 H12 GOL sing 153 n n 
O1 HO1 GOL sing 154 n n 
C2 O2 GOL sing 155 n n 
C2 C3 GOL sing 156 n n 
C2 H2 GOL sing 157 n n 
O2 HO2 GOL sing 158 n n 
C3 O3 GOL sing 159 n n 
C3 H31 GOL sing 160 n n 
C3 H32 GOL sing 161 n n 
O3 HO3 GOL sing 162 n n 
#
_atom_sites.entry_id                     3DRQ 
_atom_sites.fract_transf_matrix[1][1]    0.015748 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013055 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010616 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 GOL A 1 3731 3731 GOL GOL . 
E 5 HOH A 1 3732 1 HOH HOH . 
E 5 HOH A 2 3733 2 HOH HOH . 
E 5 HOH A 3 3734 3 HOH HOH . 
E 5 HOH A 4 3735 4 HOH HOH . 
E 5 HOH A 5 3736 5 HOH HOH . 
E 5 HOH A 6 3737 6 HOH HOH . 
E 5 HOH A 7 3738 7 HOH HOH . 
E 5 HOH A 8 3739 8 HOH HOH . 
E 5 HOH A 9 3740 9 HOH HOH . 
E 5 HOH A 10 3741 10 HOH HOH . 
E 5 HOH A 11 3742 11 HOH HOH . 
E 5 HOH A 12 3743 12 HOH HOH . 
E 5 HOH A 13 3744 13 HOH HOH . 
E 5 HOH A 14 3745 14 HOH HOH . 
E 5 HOH A 15 3746 15 HOH HOH . 
E 5 HOH A 16 3747 16 HOH HOH . 
E 5 HOH A 17 3748 17 HOH HOH . 
E 5 HOH A 18 3749 19 HOH HOH . 
E 5 HOH A 19 3750 20 HOH HOH . 
E 5 HOH A 20 3751 21 HOH HOH . 
E 5 HOH A 21 3752 22 HOH HOH . 
E 5 HOH A 22 3753 23 HOH HOH . 
E 5 HOH A 23 3754 26 HOH HOH . 
E 5 HOH A 24 3755 28 HOH HOH . 
E 5 HOH A 25 3756 30 HOH HOH . 
E 5 HOH A 26 3757 32 HOH HOH . 
E 5 HOH A 27 3758 33 HOH HOH . 
E 5 HOH A 28 3759 34 HOH HOH . 
E 5 HOH A 29 3760 35 HOH HOH . 
E 5 HOH A 30 3761 38 HOH HOH . 
E 5 HOH A 31 3762 39 HOH HOH . 
E 5 HOH A 32 3763 42 HOH HOH . 
E 5 HOH A 33 3764 45 HOH HOH . 
E 5 HOH A 34 3765 47 HOH HOH . 
E 5 HOH A 35 3766 48 HOH HOH . 
E 5 HOH A 36 3767 49 HOH HOH . 
E 5 HOH A 37 3768 51 HOH HOH . 
E 5 HOH A 38 3769 53 HOH HOH . 
E 5 HOH A 39 3770 54 HOH HOH . 
E 5 HOH A 40 3771 55 HOH HOH . 
E 5 HOH A 41 3772 57 HOH HOH . 
E 5 HOH A 42 3773 58 HOH HOH . 
E 5 HOH A 43 3774 59 HOH HOH . 
E 5 HOH A 44 3775 60 HOH HOH . 
E 5 HOH A 45 3776 65 HOH HOH . 
E 5 HOH A 46 3777 73 HOH HOH . 
E 5 HOH A 47 3778 75 HOH HOH . 
E 5 HOH A 48 3779 77 HOH HOH . 
E 5 HOH A 49 3780 79 HOH HOH . 
E 5 HOH A 50 3781 80 HOH HOH . 
E 5 HOH A 51 3782 81 HOH HOH . 
E 5 HOH A 52 3783 82 HOH HOH . 
E 5 HOH A 53 3784 83 HOH HOH . 
E 5 HOH A 54 3785 86 HOH HOH . 
E 5 HOH A 55 3786 88 HOH HOH . 
E 5 HOH A 56 3787 90 HOH HOH . 
E 5 HOH A 57 3788 91 HOH HOH . 
E 5 HOH A 58 3789 92 HOH HOH . 
E 5 HOH A 59 3790 94 HOH HOH . 
E 5 HOH A 60 3791 95 HOH HOH . 
E 5 HOH A 61 3792 97 HOH HOH . 
E 5 HOH A 62 3793 98 HOH HOH . 
E 5 HOH A 63 3794 100 HOH HOH . 
E 5 HOH A 64 3795 101 HOH HOH . 
E 5 HOH A 65 3796 102 HOH HOH . 
E 5 HOH A 66 3797 103 HOH HOH . 
E 5 HOH A 67 3798 105 HOH HOH . 
E 5 HOH A 68 3799 106 HOH HOH . 
E 5 HOH A 69 3800 107 HOH HOH . 
E 5 HOH A 70 3801 108 HOH HOH . 
E 5 HOH A 71 3802 110 HOH HOH . 
E 5 HOH A 72 3803 118 HOH HOH . 
E 5 HOH A 73 3804 120 HOH HOH . 
E 5 HOH A 74 3805 122 HOH HOH . 
E 5 HOH A 75 3806 124 HOH HOH . 
E 5 HOH A 76 3807 125 HOH HOH . 
E 5 HOH A 77 3808 127 HOH HOH . 
E 5 HOH A 78 3809 128 HOH HOH . 
E 5 HOH A 79 3810 133 HOH HOH . 
E 5 HOH A 80 3811 135 HOH HOH . 
E 5 HOH A 81 3812 139 HOH HOH . 
E 5 HOH A 82 3813 140 HOH HOH . 
E 5 HOH A 83 3814 141 HOH HOH . 
E 5 HOH A 84 3815 142 HOH HOH . 
E 5 HOH A 85 3816 147 HOH HOH . 
E 5 HOH A 86 3817 148 HOH HOH . 
E 5 HOH A 87 3818 150 HOH HOH . 
E 5 HOH A 88 3819 151 HOH HOH . 
E 5 HOH A 89 3820 152 HOH HOH . 
E 5 HOH A 90 3821 156 HOH HOH . 
E 5 HOH A 91 3822 157 HOH HOH . 
E 5 HOH A 92 3823 158 HOH HOH . 
E 5 HOH A 93 3824 160 HOH HOH . 
E 5 HOH A 94 3825 162 HOH HOH . 
E 5 HOH A 95 3826 164 HOH HOH . 
E 5 HOH A 96 3827 165 HOH HOH . 
E 5 HOH A 97 3828 169 HOH HOH . 
E 5 HOH A 98 3829 175 HOH HOH . 
E 5 HOH A 99 3830 176 HOH HOH . 
E 5 HOH A 100 3831 177 HOH HOH . 
E 5 HOH A 101 3832 180 HOH HOH . 
E 5 HOH A 102 3833 182 HOH HOH . 
E 5 HOH A 103 3834 185 HOH HOH . 
E 5 HOH A 104 3835 191 HOH HOH . 
E 5 HOH A 105 3836 192 HOH HOH . 
E 5 HOH A 106 3837 196 HOH HOH . 
E 5 HOH A 107 3838 197 HOH HOH . 
E 5 HOH A 108 3839 199 HOH HOH . 
E 5 HOH A 109 3840 202 HOH HOH . 
E 5 HOH A 110 3841 203 HOH HOH . 
E 5 HOH A 111 3842 204 HOH HOH . 
E 5 HOH A 112 3843 207 HOH HOH . 
E 5 HOH A 113 3844 209 HOH HOH . 
E 5 HOH A 114 3845 211 HOH HOH . 
E 5 HOH A 115 3846 213 HOH HOH . 
E 5 HOH A 116 3847 215 HOH HOH . 
E 5 HOH A 117 3848 218 HOH HOH . 
E 5 HOH A 118 3849 221 HOH HOH . 
E 5 HOH A 119 3850 222 HOH HOH . 
E 5 HOH A 120 3851 223 HOH HOH . 
E 5 HOH A 121 3852 224 HOH HOH . 
E 5 HOH A 122 3853 225 HOH HOH . 
E 5 HOH A 123 3854 227 HOH HOH . 
E 5 HOH A 124 3855 229 HOH HOH . 
E 5 HOH A 125 3856 230 HOH HOH . 
E 5 HOH A 126 3857 235 HOH HOH . 
E 5 HOH A 127 3858 237 HOH HOH . 
E 5 HOH A 128 3859 238 HOH HOH . 
E 5 HOH A 129 3860 239 HOH HOH . 
E 5 HOH A 130 3861 241 HOH HOH . 
E 5 HOH A 131 3862 243 HOH HOH . 
E 5 HOH A 132 3863 245 HOH HOH . 
E 5 HOH A 133 3864 246 HOH HOH . 
E 5 HOH A 134 3865 247 HOH HOH . 
E 5 HOH A 135 3866 248 HOH HOH . 
E 5 HOH A 136 3867 251 HOH HOH . 
E 5 HOH A 137 3868 255 HOH HOH . 
E 5 HOH A 138 3869 258 HOH HOH . 
E 5 HOH A 139 3870 259 HOH HOH . 
E 5 HOH A 140 3871 261 HOH HOH . 
F 5 HOH B 1 217 18 HOH HOH . 
F 5 HOH B 2 218 24 HOH HOH . 
F 5 HOH B 3 219 25 HOH HOH . 
F 5 HOH B 4 220 27 HOH HOH . 
F 5 HOH B 5 221 29 HOH HOH . 
F 5 HOH B 6 222 31 HOH HOH . 
F 5 HOH B 7 223 36 HOH HOH . 
F 5 HOH B 8 224 37 HOH HOH . 
F 5 HOH B 9 225 40 HOH HOH . 
F 5 HOH B 10 226 41 HOH HOH . 
F 5 HOH B 11 227 43 HOH HOH . 
F 5 HOH B 12 228 44 HOH HOH . 
F 5 HOH B 13 229 46 HOH HOH . 
F 5 HOH B 14 230 50 HOH HOH . 
F 5 HOH B 15 231 52 HOH HOH . 
F 5 HOH B 16 232 56 HOH HOH . 
F 5 HOH B 17 233 61 HOH HOH . 
F 5 HOH B 18 234 62 HOH HOH . 
F 5 HOH B 19 235 63 HOH HOH . 
F 5 HOH B 20 236 64 HOH HOH . 
F 5 HOH B 21 237 66 HOH HOH . 
F 5 HOH B 22 238 67 HOH HOH . 
F 5 HOH B 23 239 69 HOH HOH . 
F 5 HOH B 24 240 70 HOH HOH . 
F 5 HOH B 25 241 71 HOH HOH . 
F 5 HOH B 26 242 72 HOH HOH . 
F 5 HOH B 27 243 74 HOH HOH . 
F 5 HOH B 28 244 78 HOH HOH . 
F 5 HOH B 29 245 84 HOH HOH . 
F 5 HOH B 30 246 85 HOH HOH . 
F 5 HOH B 31 247 87 HOH HOH . 
F 5 HOH B 32 248 89 HOH HOH . 
F 5 HOH B 33 249 99 HOH HOH . 
F 5 HOH B 34 250 104 HOH HOH . 
F 5 HOH B 35 251 109 HOH HOH . 
F 5 HOH B 36 252 111 HOH HOH . 
F 5 HOH B 37 253 112 HOH HOH . 
F 5 HOH B 38 254 114 HOH HOH . 
F 5 HOH B 39 255 116 HOH HOH . 
F 5 HOH B 40 256 117 HOH HOH . 
F 5 HOH B 41 257 119 HOH HOH . 
F 5 HOH B 42 258 121 HOH HOH . 
F 5 HOH B 43 259 123 HOH HOH . 
F 5 HOH B 44 260 126 HOH HOH . 
F 5 HOH B 45 261 129 HOH HOH . 
F 5 HOH B 46 262 130 HOH HOH . 
F 5 HOH B 47 263 134 HOH HOH . 
F 5 HOH B 48 264 137 HOH HOH . 
F 5 HOH B 49 265 138 HOH HOH . 
F 5 HOH B 50 266 143 HOH HOH . 
F 5 HOH B 51 267 144 HOH HOH . 
F 5 HOH B 52 268 149 HOH HOH . 
F 5 HOH B 53 269 155 HOH HOH . 
F 5 HOH B 54 270 159 HOH HOH . 
F 5 HOH B 55 271 163 HOH HOH . 
F 5 HOH B 56 272 166 HOH HOH . 
F 5 HOH B 57 273 167 HOH HOH . 
F 5 HOH B 58 274 168 HOH HOH . 
F 5 HOH B 59 275 170 HOH HOH . 
F 5 HOH B 60 276 171 HOH HOH . 
F 5 HOH B 61 277 172 HOH HOH . 
F 5 HOH B 62 278 174 HOH HOH . 
F 5 HOH B 63 279 178 HOH HOH . 
F 5 HOH B 64 280 179 HOH HOH . 
F 5 HOH B 65 281 183 HOH HOH . 
F 5 HOH B 66 282 186 HOH HOH . 
F 5 HOH B 67 283 187 HOH HOH . 
F 5 HOH B 68 284 188 HOH HOH . 
F 5 HOH B 69 285 189 HOH HOH . 
F 5 HOH B 70 286 190 HOH HOH . 
F 5 HOH B 71 287 194 HOH HOH . 
F 5 HOH B 72 288 195 HOH HOH . 
F 5 HOH B 73 289 198 HOH HOH . 
F 5 HOH B 74 290 200 HOH HOH . 
F 5 HOH B 75 291 201 HOH HOH . 
F 5 HOH B 76 292 206 HOH HOH . 
F 5 HOH B 77 293 208 HOH HOH . 
F 5 HOH B 78 294 210 HOH HOH . 
F 5 HOH B 79 295 212 HOH HOH . 
F 5 HOH B 80 296 217 HOH HOH . 
F 5 HOH B 81 297 226 HOH HOH . 
F 5 HOH B 82 298 228 HOH HOH . 
F 5 HOH B 83 299 231 HOH HOH . 
F 5 HOH B 84 300 232 HOH HOH . 
F 5 HOH B 85 301 233 HOH HOH . 
F 5 HOH B 86 302 234 HOH HOH . 
F 5 HOH B 87 303 242 HOH HOH . 
F 5 HOH B 88 304 250 HOH HOH . 
F 5 HOH B 89 305 253 HOH HOH . 
F 5 HOH B 90 306 256 HOH HOH . 
F 5 HOH B 91 307 257 HOH HOH . 
F 5 HOH B 92 308 262 HOH HOH . 
G 5 HOH C 1 113 113 HOH HOH . 
G 5 HOH C 2 161 161 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 22.056 16.171 39.619 1 38.04 ? C1 GOL 3731 A 1 
HETATM 2 O O1 GOL . . . D 4 20.826 16.283 40.25 1 39.98 ? O1 GOL 3731 A 1 
HETATM 3 C C2 GOL . . . D 4 22.059 17.147 38.449 1 37.81 ? C2 GOL 3731 A 1 
HETATM 4 O O2 GOL . . . D 4 21.914 18.507 38.88 1 39.97 ? O2 GOL 3731 A 1 
HETATM 5 C C3 GOL . . . D 4 23.36 17.011 37.739 1 35.28 ? C3 GOL 3731 A 1 
HETATM 6 O O3 GOL . . . D 4 23.438 17.924 36.668 1 34.42 ? O3 GOL 3731 A 1 
#
_model_server_stats.io_time_ms              46 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           327 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#